Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 363-532 |
| Cow position: | chr20:9215894-9216059 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 370-528 |
| Cow position: | chr20:27944006-27943850 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 370-730 |
| Cow position: | chr20:3800761-3800407 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 221, 19 |
| Conread position: | 371-739 |
| Cow position: | chr20:26063843-26064208 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 371-741 |
| Cow position: | chr20:14441230-14440878 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 241, 18 |
| Conread position: | 371-754 |
| Cow position: | chr20:8265001-8264631 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 246, 13 |
| Conread position: | 373-631 |
| Cow position: | chr20:22884455-22884196 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 147, 14 |
| Conread position: | 373-739 |
| Cow position: | chr20:23635315-23634963 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 34, 13 |
| Conread position: | 373-740 |
| Cow position: | chr20:27352438-27352075 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 375-586 |
| Cow position: | chr20:39994234-39994029 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 378-626 |
| Cow position: | chr20:18556002-18555758 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 379-722 |
| Cow position: | chr20:36738474-36738140 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 197, 10 |
| Conread position: | 388-612 |
| Cow position: | chr20:1274580-1274794 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 388-624 |
| Cow position: | chr20:33720297-33720064 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 134, 37 |
| Conread position: | 388-628 |
| Cow position: | chr20:13155999-13156230 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 168, 78 |
| Conread position: | 388-739 |
| Cow position: | chr20:33809712-33810060 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 122, 55 |
| Conread position: | 388-759 |
| Cow position: | chr20:5805527-5805886 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 102, 78 |
| Conread position: | 389-509 |
| Cow position: | chr20:27240809-27240927 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 113, 38 |
| Conread position: | 389-519 |
| Cow position: | chr20:35837647-35837518 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 389-538 |
| Cow position: | chr20:13187715-13187864 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-585 |
| Cow position: | chr20:17556838-17557028 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 112, 14 |
| Conread position: | 389-626 |
| Cow position: | chr20:13156545-13156312 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 228, 41 |
| Conread position: | 389-740 |
| Cow position: | chr20:14408393-14408047 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 201, 38 |
| Conread position: | 390-626 |
| Cow position: | chr20:22229265-22229500 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 227, 144 |
| Conread position: | 390-668 |
| Cow position: | chr20:41909031-41908745 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 74 |
| Conread position: | 397-622 |
| Cow position: | chr20:5085696-5085474 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 95, 85 |
| Conread position: | 397-678 |
| Cow position: | chr20:7364258-7364539 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 144 |
| Conread position: | 398-631 |
| Cow position: | chr20:33344397-33344167 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 191, 70 |
| Conread position: | 403-612 |
| Cow position: | chr20:10585518-10585720 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 406-631 |
| Cow position: | chr20:39125920-39125702 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 182, 27 |
| Conread position: | 417-628 |
| Cow position: | chr20:21298825-21298615 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 200, 113 |
| Conread position: | 419-612 |
| Cow position: | chr20:25290072-25290263 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 161, 112 |
| Conread position: | 419-739 |
| Cow position: | chr20:14998202-14997889 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 20 |
Show alignments to all cow chromosomes.