Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 334-495 |
| Cow position: | chr21:748169-748330 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 347-625 |
| Cow position: | chr21:34859598-34859330 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 270, 42 |
| Conread position: | 373-597 |
| Cow position: | chr21:75733-75951 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 373-629 |
| Cow position: | chr21:14973488-14973731 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 244, 14 |
| Conread position: | 388-563 |
| Cow position: | chr21:32865718-32865887 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 137, 39 |
| Conread position: | 388-822 |
| Cow position: | chr21:37559316-37559746 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 229, 29 |
| Conread position: | 389-520 |
| Cow position: | chr21:41148352-41148484 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 389-626 |
| Cow position: | chr21:4510800-4511028 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 113, 117 |
| Conread position: | 389-626 |
| Cow position: | chr21:38744106-38743873 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 157, 137 |
| Conread position: | 389-664 |
| Cow position: | chr21:41040174-41040441 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 103, 112 |
| Conread position: | 389-730 |
| Cow position: | chr21:29997202-29997538 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 389-739 |
| Cow position: | chr21:28055963-28055612 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 15, 151 |
| Conread position: | 389-739 |
| Cow position: | chr21:28729288-28728934 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 154 |
| Conread position: | 390-520 |
| Cow position: | chr21:16785457-16785331 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 392-750 |
| Cow position: | chr21:36924447-36924104 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 44 |
| Conread position: | 397-498 |
| Cow position: | chr21:37914647-37914548 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 398-735 |
| Cow position: | chr21:14507147-14506813 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 110 |
| Conread position: | 400-575 |
| Cow position: | chr21:1577657-1577489 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 403-739 |
| Cow position: | chr21:37011504-37011832 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 214, 20 |
| Conread position: | 406-744 |
| Cow position: | chr21:37175469-37175807 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 125 |
| Conread position: | 407-604 |
| Cow position: | chr21:33374856-33375052 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 408-608 |
| Cow position: | chr21:43566202-43566405 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 409-596 |
| Cow position: | chr21:29471355-29471167 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 410-678 |
| Cow position: | chr21:15267569-15267306 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 189, 121 |
| Conread position: | 411-707 |
| Cow position: | chr21:43964708-43964998 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 55 |
| Conread position: | 417-608 |
| Cow position: | chr21:9452133-9451947 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 423-631 |
| Cow position: | chr21:33606122-33606327 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 150, 51 |
| Conread position: | 426-622 |
| Cow position: | chr21:6929479-6929283 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 101 |
Show alignments to all cow chromosomes.