Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 328-739 |
| Cow position: | chr22:38741396-38740997 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 60 |
| Conread position: | 352-585 |
| Cow position: | chr22:12000320-12000545 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 230, 19 |
| Conread position: | 368-739 |
| Cow position: | chr22:16553967-16553607 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 370-626 |
| Cow position: | chr22:106516-106761 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 162, 20 |
| Conread position: | 373-742 |
| Cow position: | chr22:40257586-40257225 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 161, 16 |
| Conread position: | 377-520 |
| Cow position: | chr22:7958369-7958229 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 387-637 |
| Cow position: | chr22:24473760-24473526 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 179, 51 |
| Conread position: | 388-626 |
| Cow position: | chr22:19633166-19632932 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 229, 19 |
| Conread position: | 388-631 |
| Cow position: | chr22:29833338-29833572 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 229, 111 |
| Conread position: | 388-631 |
| Cow position: | chr22:33639055-33639291 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 25 |
| Conread position: | 388-748 |
| Cow position: | chr22:19104660-19104304 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 42, 126 |
| Conread position: | 389-563 |
| Cow position: | chr22:20907623-20907457 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 389-563 |
| Cow position: | chr22:43561404-43561236 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 389-571 |
| Cow position: | chr22:12494486-12494663 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 389-612 |
| Cow position: | chr22:27050273-27050053 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 77 |
| Conread position: | 389-616 |
| Cow position: | chr22:29609706-29609928 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 79, 65 |
| Conread position: | 389-624 |
| Cow position: | chr22:25459384-25459614 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 389-626 |
| Cow position: | chr22:28573629-28573395 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 61, 139 |
| Conread position: | 389-739 |
| Cow position: | chr22:44358500-44358158 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 229, 5 |
| Conread position: | 390-739 |
| Cow position: | chr22:28170704-28171047 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 192, 48 |
| Conread position: | 398-739 |
| Cow position: | chr22:19285107-19284774 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 218, 121 |
| Conread position: | 398-740 |
| Cow position: | chr22:7307348-7307682 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 170, 68 |
| Conread position: | 403-632 |
| Cow position: | chr22:8860597-8860819 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 98 |
| Conread position: | 411-566 |
| Cow position: | chr22:15172838-15172685 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 148, 85 |
| Conread position: | 411-754 |
| Cow position: | chr22:28398926-28399268 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 169, 65 |
| Conread position: | 420-740 |
| Cow position: | chr22:6616296-6616617 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 111, 46 |
| Conread position: | 427-583 |
| Cow position: | chr22:25089383-25089232 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 438-631 |
| Cow position: | chr22:25445022-25445208 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 175, 24 |
| Conread position: | 438-736 |
| Cow position: | chr22:8704266-8704557 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 119, 95 |
Show alignments to all cow chromosomes.