Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 367-616 |
| Cow position: | chr23:7606467-7606224 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 77, 29 |
| Conread position: | 370-631 |
| Cow position: | chr23:22405534-22405296 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 247, 19 |
| Conread position: | 370-684 |
| Cow position: | chr23:36605515-36605827 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 372-739 |
| Cow position: | chr23:32040547-32040911 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 373-574 |
| Cow position: | chr23:4770657-4770852 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 373-626 |
| Cow position: | chr23:39211586-39211337 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 198, 10 |
| Conread position: | 383-626 |
| Cow position: | chr23:7959807-7959571 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 184, 83 |
| Conread position: | 388-621 |
| Cow position: | chr23:3985618-3985848 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 194, 78 |
| Conread position: | 388-626 |
| Cow position: | chr23:14854255-14854488 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 144, 80 |
| Conread position: | 388-631 |
| Cow position: | chr23:19058061-19058293 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 9 |
| Conread position: | 388-739 |
| Cow position: | chr23:37627801-37627452 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 389-563 |
| Cow position: | chr23:196082-196253 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 133, 30 |
| Conread position: | 389-625 |
| Cow position: | chr23:14167937-14168174 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 103, 77 |
| Conread position: | 389-625 |
| Cow position: | chr23:16384591-16384822 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 227, 99 |
| Conread position: | 389-625 |
| Cow position: | chr23:37450799-37450567 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 228, 24 |
| Conread position: | 389-628 |
| Cow position: | chr23:31598639-31598874 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 184, 22 |
| Conread position: | 389-684 |
| Cow position: | chr23:12005287-12004987 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 227, 48 |
| Conread position: | 389-739 |
| Cow position: | chr23:8242656-8242992 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 306, 142 |
| Conread position: | 389-739 |
| Cow position: | chr23:40642998-40643353 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 133 |
| Conread position: | 390-596 |
| Cow position: | chr23:20811984-20812184 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 391-513 |
| Cow position: | chr23:16030566-16030443 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 75 |
| Conread position: | 394-663 |
| Cow position: | chr23:34551203-34550936 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 397-570 |
| Cow position: | chr23:37041171-37041346 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 397-589 |
| Cow position: | chr23:38187595-38187786 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 400-587 |
| Cow position: | chr23:15279595-15279405 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 7, 138 |
| Conread position: | 403-635 |
| Cow position: | chr23:16849312-16849538 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 410-740 |
| Cow position: | chr23:33222075-33221753 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 417-571 |
| Cow position: | chr23:30543487-30543334 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 118 |
| Conread position: | 419-530 |
| Cow position: | chr23:19453695-19453584 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 419-626 |
| Cow position: | chr23:14767316-14767116 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 198, 23 |
| Conread position: | 419-743 |
| Cow position: | chr23:15878489-15878811 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 197, 112 |
Show alignments to all cow chromosomes.