Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 318-625 |
| Cow position: | chr24:10026332-10026642 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 352-631 |
| Cow position: | chr24:38299160-38298884 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 367-715 |
| Cow position: | chr24:34456685-34456342 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 210, 23 |
| Conread position: | 367-739 |
| Cow position: | chr24:37365254-37365619 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 206, 20 |
| Conread position: | 370-610 |
| Cow position: | chr24:22759474-22759706 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 370-739 |
| Cow position: | chr24:24483365-24483732 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 249 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 371-520 |
| Cow position: | chr24:19005847-19005995 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 139, 16 |
| Conread position: | 372-631 |
| Cow position: | chr24:26285374-26285118 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 120, 17 |
| Conread position: | 372-733 |
| Cow position: | chr24:35485045-35485391 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 161, 17 |
| Conread position: | 373-527 |
| Cow position: | chr24:4055180-4055029 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 135, 16 |
| Conread position: | 378-529 |
| Cow position: | chr24:40839762-40839613 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 378-625 |
| Cow position: | chr24:13167103-13167342 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 191, 11 |
| Conread position: | 388-616 |
| Cow position: | chr24:20653270-20653493 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 182, 120 |
| Conread position: | 388-631 |
| Cow position: | chr24:23251815-23252054 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 388-639 |
| Cow position: | chr24:15893878-15893637 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 197, 39 |
| Conread position: | 388-748 |
| Cow position: | chr24:36358368-36358725 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 389-615 |
| Cow position: | chr24:39837816-39838044 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 141, 219 |
| Conread position: | 389-628 |
| Cow position: | chr24:21489123-21488886 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 389-631 |
| Cow position: | chr24:44463253-44463016 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 103, 13 |
| Conread position: | 389-636 |
| Cow position: | chr24:11848181-11847942 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 228, 28 |
| Conread position: | 390-626 |
| Cow position: | chr24:37735762-37735517 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 153 |
| Conread position: | 391-530 |
| Cow position: | chr24:39546618-39546753 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 41 |
| Conread position: | 421-739 |
| Cow position: | chr24:38234384-38234072 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 113, 70 |
| Conread position: | 433-624 |
| Cow position: | chr24:15472449-15472265 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.