Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 356-562 |
| Cow position: | chr25:7302138-7301936 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 178, 12 |
| Conread position: | 366-597 |
| Cow position: | chr25:8420465-8420695 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 5, 33 |
| Conread position: | 366-626 |
| Cow position: | chr25:14508297-14508554 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 204, 23 |
| Conread position: | 370-631 |
| Cow position: | chr25:11574747-11574998 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 19 |
| Conread position: | 370-631 |
| Cow position: | chr25:11901556-11901817 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 128, 19 |
| Conread position: | 372-631 |
| Cow position: | chr25:28598500-28598750 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 245, 17 |
| Conread position: | 373-739 |
| Cow position: | chr25:8527551-8527181 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 14 |
| Conread position: | 378-615 |
| Cow position: | chr25:2393704-2393932 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 378-627 |
| Cow position: | chr25:15271042-15270796 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 388-541 |
| Cow position: | chr25:41250199-41250351 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 39 |
| Conread position: | 388-563 |
| Cow position: | chr25:24408167-24408338 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 388-594 |
| Cow position: | chr25:3967629-3967829 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 388-628 |
| Cow position: | chr25:11593771-11594001 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 229, 79 |
| Conread position: | 388-631 |
| Cow position: | chr25:16905016-16905256 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 229, 78 |
| Conread position: | 389-532 |
| Cow position: | chr25:30625523-30625664 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 121, 38 |
| Conread position: | 389-570 |
| Cow position: | chr25:16472091-16471913 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 122 |
| Conread position: | 389-576 |
| Cow position: | chr25:18876868-18877050 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 389-598 |
| Cow position: | chr25:4669836-4670032 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 389-613 |
| Cow position: | chr25:15424119-15424339 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 389-626 |
| Cow position: | chr25:24731390-24731157 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 178, 17 |
| Conread position: | 390-597 |
| Cow position: | chr25:18919368-18919575 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 17, 143 |
| Conread position: | 390-626 |
| Cow position: | chr25:40968486-40968717 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 392-631 |
| Cow position: | chr25:30574148-30574388 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 25, 142 |
| Conread position: | 397-627 |
| Cow position: | chr25:5130561-5130332 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 178, 134 |
| Conread position: | 397-631 |
| Cow position: | chr25:12646843-12647071 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 220, 71 |
| Conread position: | 399-740 |
| Cow position: | chr25:12169513-12169175 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 218, 39 |
| Conread position: | 403-541 |
| Cow position: | chr25:26474243-26474106 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 89, 98 |
| Conread position: | 403-634 |
| Cow position: | chr25:36530260-36530033 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 164, 24 |
| Conread position: | 413-597 |
| Cow position: | chr25:6866670-6866849 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 160, 12 |
| Conread position: | 433-715 |
| Cow position: | chr25:15236451-15236177 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 438-631 |
| Cow position: | chr25:33514494-33514303 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 123, 101 |
Show alignments to all cow chromosomes.