Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 345-739 |
| Cow position: | chr28:19140515-19140898 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 267, 23 |
| Conread position: | 366-618 |
| Cow position: | chr28:34202712-34202469 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 368-573 |
| Cow position: | chr28:20362715-20362919 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 139 |
| Conread position: | 370-737 |
| Cow position: | chr28:11406159-11406519 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 116, 19 |
| Conread position: | 371-606 |
| Cow position: | chr28:18589667-18589442 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 372-683 |
| Cow position: | chr28:27242711-27242405 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 373-741 |
| Cow position: | chr28:23602699-23603056 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 229, 14 |
| Conread position: | 378-740 |
| Cow position: | chr28:14671918-14672277 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 114, 11 |
| Conread position: | 389-563 |
| Cow position: | chr28:7751962-7752129 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 389-569 |
| Cow position: | chr28:5217293-5217116 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 109, 150 |
| Conread position: | 389-626 |
| Cow position: | chr28:7695637-7695869 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 389-626 |
| Cow position: | chr28:11481660-11481894 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 193, 143 |
| Conread position: | 389-630 |
| Cow position: | chr28:18497271-18497505 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 389-662 |
| Cow position: | chr28:2866021-2866287 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 78 |
| Conread position: | 391-669 |
| Cow position: | chr28:28196382-28196110 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 174, 120 |
| Conread position: | 395-739 |
| Cow position: | chr28:30970723-30970388 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 242, 8 |
| Conread position: | 395-739 |
| Cow position: | chr28:30984655-30984320 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 242, 8 |
| Conread position: | 396-754 |
| Cow position: | chr28:16010339-16010690 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 204, 13 |
| Conread position: | 397-518 |
| Cow position: | chr28:33877839-33877722 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 397-626 |
| Cow position: | chr28:7764497-7764272 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 220, 111 |
| Conread position: | 397-743 |
| Cow position: | chr28:4547256-4546907 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 415-631 |
| Cow position: | chr28:16995707-16995921 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 205, 54 |
Show alignments to all cow chromosomes.