Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 366-626 |
| Cow position: | chr29:18590501-18590755 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 251, 22 |
| Conread position: | 368-503 |
| Cow position: | chr29:35885909-35886040 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 370-626 |
| Cow position: | chr29:4853509-4853767 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 215, 17 |
| Conread position: | 371-506 |
| Cow position: | chr29:31799999-31800133 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 371-624 |
| Cow position: | chr29:39222106-39222355 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 246, 16 |
| Conread position: | 377-623 |
| Cow position: | chr29:17694971-17694728 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 378-722 |
| Cow position: | chr29:18436328-18435999 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 234, 11 |
| Conread position: | 388-529 |
| Cow position: | chr29:30115193-30115333 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 388-562 |
| Cow position: | chr29:40496517-40496687 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 111, 39 |
| Conread position: | 388-615 |
| Cow position: | chr29:19679680-19679898 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 212, 39 |
| Conread position: | 388-761 |
| Cow position: | chr29:15600679-15600313 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 17, 95 |
| Conread position: | 389-625 |
| Cow position: | chr29:24143954-24144188 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 389-631 |
| Cow position: | chr29:12220948-12220709 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 121, 34 |
| Conread position: | 389-739 |
| Cow position: | chr29:20465214-20464869 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 228, 72 |
| Conread position: | 390-616 |
| Cow position: | chr29:29736873-29737098 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 104, 73 |
| Conread position: | 390-631 |
| Cow position: | chr29:23144770-23144534 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 391-634 |
| Cow position: | chr29:3776557-3776324 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 391-737 |
| Cow position: | chr29:42322870-42322535 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 398-662 |
| Cow position: | chr29:27483674-27483927 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 247, 68 |
| Conread position: | 398-663 |
| Cow position: | chr29:9687374-9687108 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 48, 89 |
| Conread position: | 398-663 |
| Cow position: | chr29:12468934-12468677 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 34 |
| Conread position: | 399-610 |
| Cow position: | chr29:8206929-8207138 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 406-634 |
| Cow position: | chr29:480622-480394 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 154, 113 |
Show alignments to all cow chromosomes.