Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 336-626 |
| Cow position: | chr7:31115962-31116246 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 367-617 |
| Cow position: | chr7:37433103-37433347 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 20 |
| Conread position: | 369-737 |
| Cow position: | chr7:17392743-17392382 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 256 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 248, 16 |
| Conread position: | 370-585 |
| Cow position: | chr7:43842869-43843073 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 96, 19 |
| Conread position: | 370-631 |
| Cow position: | chr7:6067179-6067446 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 373-520 |
| Cow position: | chr7:31112394-31112250 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 373-739 |
| Cow position: | chr7:7557238-7556894 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 244, 14 |
| Conread position: | 378-753 |
| Cow position: | chr7:37003797-37003444 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 246, 13 |
| Conread position: | 388-519 |
| Cow position: | chr7:6534980-6535110 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 104, 76 |
| Conread position: | 388-571 |
| Cow position: | chr7:13973166-13973345 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 388-572 |
| Cow position: | chr7:64125658-64125840 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 388-597 |
| Cow position: | chr7:9369145-9369350 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 388-613 |
| Cow position: | chr7:8133920-8134136 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 209, 50 |
| Conread position: | 388-626 |
| Cow position: | chr7:54088-53846 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 19, 149 |
| Conread position: | 388-737 |
| Cow position: | chr7:52878818-52878479 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 106, 24 |
| Conread position: | 388-739 |
| Cow position: | chr7:38080410-38080759 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 104, 15 |
| Conread position: | 389-528 |
| Cow position: | chr7:18668097-18667959 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 389-530 |
| Cow position: | chr7:36055300-36055160 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 389-620 |
| Cow position: | chr7:7520481-7520701 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 77 |
| Conread position: | 389-735 |
| Cow position: | chr7:29941901-29941566 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 389-735 |
| Cow position: | chr7:51527725-51527380 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 74, 145 |
| Conread position: | 389-737 |
| Cow position: | chr7:54086538-54086885 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 391-626 |
| Cow position: | chr7:68752886-68753117 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 226, 36 |
| Conread position: | 391-674 |
| Cow position: | chr7:9469025-9469306 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 101, 125 |
| Conread position: | 395-684 |
| Cow position: | chr7:54871165-54870876 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 194, 136 |
| Conread position: | 397-739 |
| Cow position: | chr7:19972229-19971894 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 220, 124 |
| Conread position: | 399-535 |
| Cow position: | chr7:2101734-2101868 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 399-616 |
| Cow position: | chr7:5491585-5491380 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 400-530 |
| Cow position: | chr7:55122769-55122639 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 403-520 |
| Cow position: | chr7:11334160-11334044 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 100, 24 |
| Conread position: | 403-624 |
| Cow position: | chr7:63594418-63594204 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 152, 61 |
| Conread position: | 403-635 |
| Cow position: | chr7:935183-934943 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 10, 64 |
| Conread position: | 408-684 |
| Cow position: | chr7:9089534-9089250 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 124, 132 |
| Conread position: | 409-529 |
| Cow position: | chr7:11185408-11185288 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 416-626 |
| Cow position: | chr7:64270625-64270415 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 426-739 |
| Cow position: | chr7:21922110-21922422 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 226, 40 |
| Conread position: | 438-629 |
| Cow position: | chr7:45120186-45120377 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 178, 93 |
Show alignments to all cow chromosomes.