Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
| Conread position: | 284-623 |
| Cow position: | chr8:55363117-55362792 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 29 |
| Conread position: | 363-596 |
| Cow position: | chr8:53819810-53819583 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 199, 24 |
| Conread position: | 366-516 |
| Cow position: | chr8:32564117-32564264 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 369-626 |
| Cow position: | chr8:5860693-5860940 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 228, 18 |
| Conread position: | 369-626 |
| Cow position: | chr8:13957533-13957286 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 248, 22 |
| Conread position: | 370-636 |
| Cow position: | chr8:56559160-56559422 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 183, 16 |
| Conread position: | 371-628 |
| Cow position: | chr8:36955821-36955572 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 246, 19 |
| Conread position: | 371-739 |
| Cow position: | chr8:30539824-30540178 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 243, 18 |
| Conread position: | 378-584 |
| Cow position: | chr8:13467795-13467994 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 378-608 |
| Cow position: | chr8:46108608-46108387 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 29, 13 |
| Conread position: | 388-518 |
| Cow position: | chr8:21305842-21305716 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 45 |
| Conread position: | 388-563 |
| Cow position: | chr8:4441656-4441485 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 388-570 |
| Cow position: | chr8:4356209-4356034 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 388-616 |
| Cow position: | chr8:45179473-45179250 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 388-739 |
| Cow position: | chr8:3702525-3702170 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 151, 278 |
| Conread position: | 388-745 |
| Cow position: | chr8:22377941-22377584 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 142, 78 |
| Conread position: | 389-625 |
| Cow position: | chr8:9819916-9820152 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 153, 138 |
| Conread position: | 389-631 |
| Cow position: | chr8:5494958-5495201 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 76, 145 |
| Conread position: | 389-631 |
| Cow position: | chr8:49047345-49047115 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 116 |
| Conread position: | 389-634 |
| Cow position: | chr8:45525537-45525299 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 181, 103 |
| Conread position: | 391-740 |
| Cow position: | chr8:2275233-2274891 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 227, 39 |
| Conread position: | 392-625 |
| Cow position: | chr8:56717603-56717377 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 225, 116 |
| Conread position: | 395-632 |
| Cow position: | chr8:59332333-59332567 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 190, 8 |
| Conread position: | 395-717 |
| Cow position: | chr8:20883424-20883741 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 172, 75 |
| Conread position: | 397-563 |
| Cow position: | chr8:9579264-9579425 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 113, 30 |
| Conread position: | 397-739 |
| Cow position: | chr8:11891602-11891935 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 215, 54 |
| Conread position: | 398-598 |
| Cow position: | chr8:40079409-40079217 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 398-663 |
| Cow position: | chr8:35370535-35370794 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 153, 7 |
| Conread position: | 398-680 |
| Cow position: | chr8:55336506-55336219 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 184, 68 |
| Conread position: | 398-722 |
| Cow position: | chr8:34510378-34510692 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 289, 25 |
| Conread position: | 403-631 |
| Cow position: | chr8:5876807-5877032 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 214, 73 |
| Conread position: | 404-628 |
| Cow position: | chr8:22036993-22036775 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 86, 50 |
| Conread position: | 409-736 |
| Cow position: | chr8:39064988-39065308 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 229, 18 |
| Conread position: | 411-631 |
| Cow position: | chr8:30558720-30558937 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 206, 103 |
| Conread position: | 417-687 |
| Cow position: | chr8:61922651-61922925 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 115, 15 |
| Conread position: | 421-575 |
| Cow position: | chr8:36408527-36408675 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 426-715 |
| Cow position: | chr8:36322633-36322920 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 82, 40 |
| Conread position: | 467-758 |
| Cow position: | chr8:25246448-25246157 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 150, 64 |
Show alignments to all cow chromosomes.