Cow genome map
Conread name: | Ss1.1-Pig4-TMW8030B08.3 |
Conread position: | 349-737 |
Cow position: | chrX:7460135-7459744 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 260 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 23, 16 |
Conread position: | 359-630 |
Cow position: | chrX:25975018-25974755 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 193 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 258, 6 |
Conread position: | 359-684 |
Cow position: | chrX:30732728-30732403 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 232 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 221, 28 |
Conread position: | 362-621 |
Cow position: | chrX:20371037-20371281 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 180 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 45, 27 |
Conread position: | 364-616 |
Cow position: | chrX:13231237-13231482 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 179 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 8, 26 |
Conread position: | 365-499 |
Cow position: | chrX:1707338-1707206 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 127, 22 |
Conread position: | 365-621 |
Cow position: | chrX:29475686-29475932 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 179 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 41, 22 |
Conread position: | 366-658 |
Cow position: | chrX:32030617-32030327 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 213 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 251, 21 |
Conread position: | 368-678 |
Cow position: | chrX:21312902-21312594 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 211 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 40, 19 |
Conread position: | 369-663 |
Cow position: | chrX:15756963-15757262 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 209 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 220, 20 |
Conread position: | 370-518 |
Cow position: | chrX:24073124-24072978 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 140, 18 |
Conread position: | 370-570 |
Cow position: | chrX:6083718-6083526 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 141 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 140, 19 |
Conread position: | 370-626 |
Cow position: | chrX:6612945-6612682 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 193 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 140, 13 |
Conread position: | 370-626 |
Cow position: | chrX:26700861-26701113 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 192 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 62, 16 |
Conread position: | 370-635 |
Cow position: | chrX:36101794-36101540 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 187 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 56, 19 |
Conread position: | 370-737 |
Cow position: | chrX:30942594-30942232 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 243 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 40, 17 |
Conread position: | 371-566 |
Cow position: | chrX:4606678-4606867 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 143 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 76, 16 |
Conread position: | 371-626 |
Cow position: | chrX:38414243-38413983 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 189 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 59, 16 |
Conread position: | 371-737 |
Cow position: | chrX:38173774-38174129 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 249 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 246, 18 |
Conread position: | 373-490 |
Cow position: | chrX:41243600-41243486 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 373-625 |
Cow position: | chrX:4085067-4084830 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 178 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 119, 13 |
Conread position: | 373-626 |
Cow position: | chrX:6443760-6444001 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 177 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 130, 17 |
Conread position: | 373-735 |
Cow position: | chrX:17621774-17622132 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 243 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 75, 15 |
Conread position: | 373-740 |
Cow position: | chrX:39878373-39878005 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 258 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 124, 16 |
Conread position: | 378-520 |
Cow position: | chrX:46071218-46071358 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 106 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 378-597 |
Cow position: | chrX:30839141-30838926 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 151 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 25, 13 |
Conread position: | 378-621 |
Cow position: | chrX:42521975-42521737 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 166 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 187, 39 |
Conread position: | 379-626 |
Cow position: | chrX:31265832-31266072 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 178 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 25, 11 |
Conread position: | 379-739 |
Cow position: | chrX:4280324-4280677 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 252 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 190, 10 |
Conread position: | 382-751 |
Cow position: | chrX:11913684-11914045 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 235 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 238, 8 |
Conread position: | 383-742 |
Cow position: | chrX:33779724-33779367 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 239 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 167, 149 |
Conread position: | 388-506 |
Cow position: | chrX:24592032-24592148 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 388-621 |
Cow position: | chrX:31770520-31770297 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 173 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 18, 36 |
Conread position: | 388-625 |
Cow position: | chrX:13184328-13184555 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 179 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 120, 37 |
Conread position: | 388-636 |
Cow position: | chrX:9293136-9293377 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 186 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 229, 41 |
Conread position: | 388-739 |
Cow position: | chrX:20370380-20370727 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 241 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 220, 18 |
Conread position: | 389-493 |
Cow position: | chrX:29534357-29534252 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 86 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 389-528 |
Cow position: | chrX:45457145-45457006 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 103 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 389-531 |
Cow position: | chrX:38206794-38206937 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 106 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 389-586 |
Cow position: | chrX:43375815-43375622 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 140 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 389-626 |
Cow position: | chrX:23897425-23897195 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 167 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 56, 38 |
Conread position: | 389-626 |
Cow position: | chrX:27323885-27323661 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 171 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 153, 53 |
Conread position: | 389-693 |
Cow position: | chrX:27379373-27379678 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 217 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 19, 143 |
Conread position: | 389-737 |
Cow position: | chrX:34795192-34795536 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 252 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 18, 31 |
Conread position: | 389-741 |
Cow position: | chrX:10989779-10990128 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 238 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 103, 34 |
Conread position: | 389-742 |
Cow position: | chrX:24436785-24437140 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 232 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 18, 242 |
Conread position: | 389-743 |
Cow position: | chrX:43786257-43786605 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 236 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 262, 150 |
Conread position: | 389-748 |
Cow position: | chrX:38890252-38890608 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 256 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 228, 142 |
Conread position: | 390-683 |
Cow position: | chrX:28818308-28818598 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 200 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 23, 77 |
Conread position: | 391-612 |
Cow position: | chrX:4039631-4039847 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 163 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 47, 10 |
Conread position: | 391-631 |
Cow position: | chrX:7897332-7897096 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 166 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 101, 70 |
Conread position: | 396-730 |
Cow position: | chrX:24208098-24207764 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 220 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 36, 137 |
Conread position: | 399-616 |
Cow position: | chrX:28822304-28822520 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 153 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 191, 67 |
Conread position: | 403-739 |
Cow position: | chrX:29524508-29524842 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 229 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 147, 20 |
Conread position: | 417-662 |
Cow position: | chrX:45546822-45546571 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 172 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 115, 49 |
Conread position: | 417-735 |
Cow position: | chrX:17981905-17982214 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 220 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 78, 17 |
Conread position: | 423-612 |
Cow position: | chrX:2716454-2716265 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 132 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 426-626 |
Cow position: | chrX:25361211-25361406 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 153 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 191, 56 |
Conread position: | 433-757 |
Cow position: | chrX:14850788-14850468 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 221 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 184, 18 |
Conread position: | 459-739 |
Cow position: | chrX:14602730-14602454 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 192 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 158, 7 |
Show alignments to all cow chromosomes.