Cow genome map

Conread name: Ss1.1-Pig4-TMW8030B08.3

Conread position: 349-737
Cow position: chrX:7460135-7459744 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 260
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 16

Conread position: 359-630
Cow position: chrX:25975018-25974755 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 258, 6

Conread position: 359-684
Cow position: chrX:30732728-30732403 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 221, 28

Conread position: 362-621
Cow position: chrX:20371037-20371281 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 27

Conread position: 364-616
Cow position: chrX:13231237-13231482 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 26

Conread position: 365-499
Cow position: chrX:1707338-1707206 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 127, 22

Conread position: 365-621
Cow position: chrX:29475686-29475932 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 22

Conread position: 366-658
Cow position: chrX:32030617-32030327 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 213
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 251, 21

Conread position: 368-678
Cow position: chrX:21312902-21312594 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 211
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 40, 19

Conread position: 369-663
Cow position: chrX:15756963-15757262 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 220, 20

Conread position: 370-518
Cow position: chrX:24073124-24072978 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 140, 18

Conread position: 370-570
Cow position: chrX:6083718-6083526 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 140, 19

Conread position: 370-626
Cow position: chrX:6612945-6612682 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 140, 13

Conread position: 370-626
Cow position: chrX:26700861-26701113 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 16

Conread position: 370-635
Cow position: chrX:36101794-36101540 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 19

Conread position: 370-737
Cow position: chrX:30942594-30942232 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 243
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 17

Conread position: 371-566
Cow position: chrX:4606678-4606867 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 16

Conread position: 371-626
Cow position: chrX:38414243-38413983 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 59, 16

Conread position: 371-737
Cow position: chrX:38173774-38174129 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 246, 18

Conread position: 373-490
Cow position: chrX:41243600-41243486 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 373-625
Cow position: chrX:4085067-4084830 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 119, 13

Conread position: 373-626
Cow position: chrX:6443760-6444001 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 130, 17

Conread position: 373-735
Cow position: chrX:17621774-17622132 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 243
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 15

Conread position: 373-740
Cow position: chrX:39878373-39878005 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 258
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 124, 16

Conread position: 378-520
Cow position: chrX:46071218-46071358 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 378-597
Cow position: chrX:30839141-30838926 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 13

Conread position: 378-621
Cow position: chrX:42521975-42521737 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 187, 39

Conread position: 379-626
Cow position: chrX:31265832-31266072 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 11

Conread position: 379-739
Cow position: chrX:4280324-4280677 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 190, 10

Conread position: 382-751
Cow position: chrX:11913684-11914045 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 235
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 238, 8

Conread position: 383-742
Cow position: chrX:33779724-33779367 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 167, 149

Conread position: 388-506
Cow position: chrX:24592032-24592148 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 388-621
Cow position: chrX:31770520-31770297 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 18, 36

Conread position: 388-625
Cow position: chrX:13184328-13184555 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 120, 37

Conread position: 388-636
Cow position: chrX:9293136-9293377 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 229, 41

Conread position: 388-739
Cow position: chrX:20370380-20370727 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 220, 18

Conread position: 389-493
Cow position: chrX:29534357-29534252 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 389-528
Cow position: chrX:45457145-45457006 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 389-531
Cow position: chrX:38206794-38206937 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 139, 0

Conread position: 389-586
Cow position: chrX:43375815-43375622 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 143, 0

Conread position: 389-626
Cow position: chrX:23897425-23897195 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 38

Conread position: 389-626
Cow position: chrX:27323885-27323661 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 153, 53

Conread position: 389-693
Cow position: chrX:27379373-27379678 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 143

Conread position: 389-737
Cow position: chrX:34795192-34795536 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 31

Conread position: 389-741
Cow position: chrX:10989779-10990128 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 103, 34

Conread position: 389-742
Cow position: chrX:24436785-24437140 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 18, 242

Conread position: 389-743
Cow position: chrX:43786257-43786605 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 262, 150

Conread position: 389-748
Cow position: chrX:38890252-38890608 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 228, 142

Conread position: 390-683
Cow position: chrX:28818308-28818598 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 23, 77

Conread position: 391-612
Cow position: chrX:4039631-4039847 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 10

Conread position: 391-631
Cow position: chrX:7897332-7897096 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 101, 70

Conread position: 396-730
Cow position: chrX:24208098-24207764 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 220
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 137

Conread position: 399-616
Cow position: chrX:28822304-28822520 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 191, 67

Conread position: 403-739
Cow position: chrX:29524508-29524842 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 229
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 147, 20

Conread position: 417-662
Cow position: chrX:45546822-45546571 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 49

Conread position: 417-735
Cow position: chrX:17981905-17982214 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 17

Conread position: 423-612
Cow position: chrX:2716454-2716265 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 426-626
Cow position: chrX:25361211-25361406 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 191, 56

Conread position: 433-757
Cow position: chrX:14850788-14850468 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 184, 18

Conread position: 459-739
Cow position: chrX:14602730-14602454 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 158, 7

Show alignments to all cow chromosomes.