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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8030F10.5
        

               
Conread position:
               
101-648
               

               
Cow position:
               
chr2:57775519-57776065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
457, 0
               

               
Conread position:
               
213-647
               

               
Cow position:
               
chr2:14955169-14955607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
250-647
               

               
Cow position:
               
chr2:29041177-29041600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
250-647
               

               
Cow position:
               
chr2:67744190-67744587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 197
               

               
Conread position:
               
252-424
               

               
Cow position:
               
chr2:14556669-14556494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
253-428
               

               
Cow position:
               
chr2:10741081-10740906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
253-473
               

               
Cow position:
               
chr2:68417007-68416784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
253-624
               

               
Cow position:
               
chr2:14155144-14155533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
91, 190
               

               
Conread position:
               
255-611
               

               
Cow position:
               
chr2:53165532-53165882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
256-427
               

               
Cow position:
               
chr2:70916026-70916198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
86, 109
               

               
Conread position:
               
257-401
               

               
Cow position:
               
chr2:45936672-45936524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 129
               

               
Conread position:
               
257-454
               

               
Cow position:
               
chr2:72757623-72757827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
257-456
               

               
Cow position:
               
chr2:55256826-55256623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 185
               

               
Conread position:
               
257-462
               

               
Cow position:
               
chr2:54186902-54186694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 110
               

               
Conread position:
               
257-467
               

               
Cow position:
               
chr2:10972144-10972358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
84, 187
               

               
Conread position:
               
257-470
               

               
Cow position:
               
chr2:12752205-12751988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
84, 187
               

               
Conread position:
               
257-472
               

               
Cow position:
               
chr2:817514-817737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 122
               

               
Conread position:
               
257-472
               

               
Cow position:
               
chr2:35440962-35441182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
85, 130
               

               
Conread position:
               
257-472
               

               
Cow position:
               
chr2:46939928-46939713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
84, 174
               

               
Conread position:
               
257-472
               

               
Cow position:
               
chr2:77213756-77213539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
257-473
               

               
Cow position:
               
chr2:2762015-2761795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
85, 187
               

               
Conread position:
               
257-473
               

               
Cow position:
               
chr2:6883345-6883548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
203, 40
               

               
Conread position:
               
257-473
               

               
Cow position:
               
chr2:28816767-28816981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
257-476
               

               
Cow position:
               
chr2:51414013-51414245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
86, 190
               

               
Conread position:
               
257-527
               

               
Cow position:
               
chr2:6241401-6241673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
87, 188
               

               
Conread position:
               
257-537
               

               
Cow position:
               
chr2:36630099-36630395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 187
               

               
Conread position:
               
257-546
               

               
Cow position:
               
chr2:41300883-41301188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 187
               

               
Conread position:
               
257-605
               

               
Cow position:
               
chr2:56147648-56148018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
85, 129
               

               
Conread position:
               
257-605
               

               
Cow position:
               
chr2:82648777-82648421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 187
               

               
Conread position:
               
257-610
               

               
Cow position:
               
chr2:33279322-33279697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
257-619
               

               
Cow position:
               
chr2:6291945-6292321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 183
               

               
Conread position:
               
257-642
               

               
Cow position:
               
chr2:24882349-24882743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 149
               

               
Conread position:
               
257-646
               

               
Cow position:
               
chr2:9911348-9911744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 85
               

               
Conread position:
               
257-646
               

               
Cow position:
               
chr2:36878974-36878571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:301029-300628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:12596012-12596417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:15693507-15693907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 188
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:16301988-16302391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 95
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:16497051-16496642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:16752823-16752424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:17808308-17808715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 188
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:19048796-19048393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:23015175-23014774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 59
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:28632809-28632404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:30657282-30656877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:30751482-30751887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:34467586-34467175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 193
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:40248609-40248204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:45230503-45230911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 55
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:46182461-46182055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 196
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:48533918-48533513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 316
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:49461493-49461898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:53543013-53543418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:56054815-56055219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:60937298-60937704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 164
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:64088821-64088419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 131
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:66218236-66217825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 192
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:66924330-66924736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
87, 188
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:68422626-68423031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:71438065-71437666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:72535355-72535750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr2:80892997-80892594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 186
               

               
Conread position:
               
258-643
               

               
Cow position:
               
chr2:21210841-21211241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
258-645
               

               
Cow position:
               
chr2:83746097-83745693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
258-647
               

               
Cow position:
               
chr2:57508722-57509133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 187
               

               
Conread position:
               
259-647
               

               
Cow position:
               
chr2:43596854-43596455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 83
               

               
Conread position:
               
260-432
               

               
Cow position:
               
chr2:1434394-1434573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
261-633
               

               
Cow position:
               
chr2:14291445-14291817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 48
               

               
Conread position:
               
261-647
               

               
Cow position:
               
chr2:33263300-33262901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 176
               

               
Conread position:
               
267-643
               

               
Cow position:
               
chr2:42599225-42599636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
75, 122
               

               
Conread position:
               
268-647
               

               
Cow position:
               
chr2:65463896-65463515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
269-467
               

               
Cow position:
               
chr2:43877937-43878133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
72, 118
               

               
Conread position:
               
269-473
               

               
Cow position:
               
chr2:31354975-31355184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 176
               

               
Conread position:
               
269-530
               

               
Cow position:
               
chr2:35463792-35464062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 102
               

               
Conread position:
               
269-647
               

               
Cow position:
               
chr2:13603442-13603835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
269-647
               

               
Cow position:
               
chr2:21357541-21357158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 154
               

               
Conread position:
               
270-444
               

               
Cow position:
               
chr2:4742451-4742630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
270-456
               

               
Cow position:
               
chr2:74210610-74210419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 88
               

               
Conread position:
               
270-472
               

               
Cow position:
               
chr2:1303073-1303272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
270-472
               

               
Cow position:
               
chr2:28725548-28725742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
74, 140
               

               
Conread position:
               
270-472
               

               
Cow position:
               
chr2:43525753-43525545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 176
               

               
Conread position:
               
270-472
               

               
Cow position:
               
chr2:53323525-53323725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 133
               

               
Conread position:
               
270-473
               

               
Cow position:
               
chr2:31752241-31752038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
270-504
               

               
Cow position:
               
chr2:65717053-65716819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 104
               

               
Conread position:
               
270-550
               

               
Cow position:
               
chr2:86508349-86508053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
270-553
               

               
Cow position:
               
chr2:36997446-36997744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
74, 174
               

               
Conread position:
               
270-605
               

               
Cow position:
               
chr2:38831249-38830895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
270-611
               

               
Cow position:
               
chr2:36084088-36084435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
194, 56
               

               
Conread position:
               
270-627
               

               
Cow position:
               
chr2:2590618-2590247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
270-630
               

               
Cow position:
               
chr2:30380362-30380735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 173
               

               
Conread position:
               
270-634
               

               
Cow position:
               
chr2:32659517-32659896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
270-635
               

               
Cow position:
               
chr2:4726058-4726441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
72, 117
               

               
Conread position:
               
270-636
               

               
Cow position:
               
chr2:71164395-71164017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
270-642
               

               
Cow position:
               
chr2:36571853-36572233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
270-646
               

               
Cow position:
               
chr2:4796082-4796479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
17, 6
               

               
Conread position:
               
270-646
               

               
Cow position:
               
chr2:13860985-13860596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 106
               

               
Conread position:
               
270-646
               

               
Cow position:
               
chr2:49455289-49454906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:2181187-2180797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:8345801-8345413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
17, 6
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:9407652-9408043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 66
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:9956143-9955753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 142
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:10608709-10608318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:12547672-12548051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:20522013-20521626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 174
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:23271608-23271214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:23642468-23642076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:28654419-28654031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:34642755-34643142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:37044359-37044751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:52621862-52622254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:54740554-54740954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 311
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:55632100-55632490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 153
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:63067786-63067406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:67417683-67417291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:70638478-70638870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 164
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr2:72963274-72962886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 299
               

               
Conread position:
               
270-648
               

               
Cow position:
               
chr2:23798767-23799159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
271-472
               

               
Cow position:
               
chr2:49344027-49343826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
271-531
               

               
Cow position:
               
chr2:45504986-45505269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 179
               

               
Conread position:
               
271-584
               

               
Cow position:
               
chr2:51480257-51480591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 177
               

               
Conread position:
               
271-621
               

               
Cow position:
               
chr2:28480748-28480407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 173
               

               
Conread position:
               
271-647
               

               
Cow position:
               
chr2:72646268-72645887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
203, 90
               

               
Conread position:
               
272-370
               

               
Cow position:
               
chr2:5797715-5797612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
272-378
               

               
Cow position:
               
chr2:73467289-73467177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
272-389
               

               
Cow position:
               
chr2:5318233-5318355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
272-392
               

               
Cow position:
               
chr2:3840323-3840448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
272-404
               

               
Cow position:
               
chr2:5600373-5600504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
272-405
               

               
Cow position:
               
chr2:72542899-72543038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
272-411
               

               
Cow position:
               
chr2:2095719-2095576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
272-422
               

               
Cow position:
               
chr2:36910055-36909900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
272-423
               

               
Cow position:
               
chr2:48130380-48130540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
272-426
               

               
Cow position:
               
chr2:17345822-17345979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
272-427
               

               
Cow position:
               
chr2:38636224-38636065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 140
               

               
Conread position:
               
272-427
               

               
Cow position:
               
chr2:74861035-74861194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
272-428
               

               
Cow position:
               
chr2:62674913-62674755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 115
               

               
Conread position:
               
272-437
               

               
Cow position:
               
chr2:34574007-34574180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
272-437
               

               
Cow position:
               
chr2:54354099-54353928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
272-449
               

               
Cow position:
               
chr2:14954997-14955178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-449
               

               
Cow position:
               
chr2:74468904-74468723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-456
               

               
Cow position:
               
chr2:37324974-37325160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
70, 147
               

               
Conread position:
               
272-460
               

               
Cow position:
               
chr2:65451932-65452123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-467
               

               
Cow position:
               
chr2:65930323-65930131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 98
               

               
Conread position:
               
272-468
               

               
Cow position:
               
chr2:86309325-86309127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
72, 106
               

               
Conread position:
               
272-469
               

               
Cow position:
               
chr2:11962132-11962333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 172
               

               
Conread position:
               
272-470
               

               
Cow position:
               
chr2:31732874-31732677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
272-471
               

               
Cow position:
               
chr2:41045778-41045575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-471
               

               
Cow position:
               
chr2:41392238-41392439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr2:2491433-2491634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 169
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr2:5867236-5867029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
72, 175
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr2:20878926-20878730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr2:29219051-29219253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
70, 168
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr2:30909584-30909784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
74, 155
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr2:52380043-52379840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 181
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr2:52857224-52857020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr2:53175463-53175667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr2:53850101-53850302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
69, 169
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr2:60674652-60674854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
70, 81
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr2:63590185-63589984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:825864-825659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:2084294-2084089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:2212403-2212198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:4274545-4274340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:6528916-6529121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:11705723-11705923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:14938759-14938964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:23981004-23981197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:36047232-36047031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:36357428-36357223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
69, 171
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:36629038-36628833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:39107340-39107544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:41173369-41173569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 140
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:47618669-47618874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:49827449-49827244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:50612719-50612514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:51359111-51358908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
69, 109
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:53485749-53485551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:57586994-57586789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:61517030-61516825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:65023488-65023694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr2:86496736-86496941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-476
               

               
Cow position:
               
chr2:5980612-5980818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
68, 172
               

               
Conread position:
               
272-487
               

               
Cow position:
               
chr2:20917102-20916886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
272-489
               

               
Cow position:
               
chr2:84866813-84867034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-504
               

               
Cow position:
               
chr2:44987061-44986828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
70, 101
               

               
Conread position:
               
272-526
               

               
Cow position:
               
chr2:2018644-2018905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-530
               

               
Cow position:
               
chr2:2721413-2721688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-536
               

               
Cow position:
               
chr2:32062651-32062372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
272-536
               

               
Cow position:
               
chr2:70498551-70498271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-536
               

               
Cow position:
               
chr2:72931003-72930723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 173
               

               
Conread position:
               
272-537
               

               
Cow position:
               
chr2:4070403-4070136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
10, 173
               

               
Conread position:
               
272-538
               

               
Cow position:
               
chr2:19014438-19014720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-546
               

               
Cow position:
               
chr2:56199212-56199501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 151
               

               
Conread position:
               
272-547
               

               
Cow position:
               
chr2:17426507-17426799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
272-547
               

               
Cow position:
               
chr2:56007839-56008130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-550
               

               
Cow position:
               
chr2:18673936-18674230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-560
               

               
Cow position:
               
chr2:9186812-9186510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
272-561
               

               
Cow position:
               
chr2:6739218-6738920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
272-561
               

               
Cow position:
               
chr2:70656289-70656578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
69, 40
               

               
Conread position:
               
272-566
               

               
Cow position:
               
chr2:33555259-33554966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
272-567
               

               
Cow position:
               
chr2:44006363-44006673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 166
               

               
Conread position:
               
272-567
               

               
Cow position:
               
chr2:74238857-74238536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 168
               

               
Conread position:
               
272-577
               

               
Cow position:
               
chr2:63070200-63069885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
272-578
               

               
Cow position:
               
chr2:7466508-7466833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
72, 306
               

               
Conread position:
               
272-580
               

               
Cow position:
               
chr2:16410618-16410934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 40
               

               
Conread position:
               
272-580
               

               
Cow position:
               
chr2:47833631-47833954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
104, 91
               

               
Conread position:
               
272-583
               

               
Cow position:
               
chr2:4224309-4223981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
272-583
               

               
Cow position:
               
chr2:31512109-31512434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-584
               

               
Cow position:
               
chr2:24688769-24689096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-584
               

               
Cow position:
               
chr2:52159580-52159257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
72, 29
               

               
Conread position:
               
272-584
               

               
Cow position:
               
chr2:79978002-79977675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 169
               

               
Conread position:
               
272-587
               

               
Cow position:
               
chr2:40577380-40577050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
272-589
               

               
Cow position:
               
chr2:43878979-43879311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
184, 70
               

               
Conread position:
               
272-590
               

               
Cow position:
               
chr2:4931075-4930742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-595
               

               
Cow position:
               
chr2:29733616-29733949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 70
               

               
Conread position:
               
272-605
               

               
Cow position:
               
chr2:35359079-35359427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
272-606
               

               
Cow position:
               
chr2:45917678-45917330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 125
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr2:209016-208666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
272-611
               

               
Cow position:
               
chr2:15702270-15701912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
272-614
               

               
Cow position:
               
chr2:13726542-13726190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
70, 121
               

               
Conread position:
               
272-614
               

               
Cow position:
               
chr2:19293973-19294331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 174
               

               
Conread position:
               
272-615
               

               
Cow position:
               
chr2:50776903-50777252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
272-616
               

               
Cow position:
               
chr2:43046682-43046329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-618
               

               
Cow position:
               
chr2:7534464-7534110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
272-618
               

               
Cow position:
               
chr2:58537646-58537283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 177
               

               
Conread position:
               
272-619
               

               
Cow position:
               
chr2:36722368-36722729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
272-621
               

               
Cow position:
               
chr2:64765827-64765476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
272-623
               

               
Cow position:
               
chr2:10656521-10656150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-625
               

               
Cow position:
               
chr2:13066919-13066551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-625
               

               
Cow position:
               
chr2:48716816-48717184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-630
               

               
Cow position:
               
chr2:16333956-16334322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
197, 46
               

               
Conread position:
               
272-632
               

               
Cow position:
               
chr2:34491506-34491884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
272-633
               

               
Cow position:
               
chr2:11805671-11806020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
216, 73
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr2:4017529-4017153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr2:35194795-35195172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-634
               

               
Cow position:
               
chr2:57938484-57938861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr2:3669149-3669524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 124
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr2:21606631-21607008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr2:53533472-53533104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 156
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr2:67682873-67683251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-640
               

               
Cow position:
               
chr2:34048838-34048457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 158
               

               
Conread position:
               
272-641
               

               
Cow position:
               
chr2:16304626-16304998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 146
               

               
Conread position:
               
272-642
               

               
Cow position:
               
chr2:14349094-14349484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
272-642
               

               
Cow position:
               
chr2:28637942-28637572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
272-642
               

               
Cow position:
               
chr2:41058349-41057962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
272-642
               

               
Cow position:
               
chr2:57339031-57339416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-642
               

               
Cow position:
               
chr2:80840082-80839701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-643
               

               
Cow position:
               
chr2:4180028-4179643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
272-643
               

               
Cow position:
               
chr2:38659448-38659068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 140
               

               
Conread position:
               
272-643
               

               
Cow position:
               
chr2:56076409-56076782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 46
               

               
Conread position:
               
272-644
               

               
Cow position:
               
chr2:18062309-18061922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 146
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:5152331-5152719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:24876114-24875726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:31125111-31125497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 107
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:34617290-34617676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 150
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:39677161-39677549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:41954086-41954471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:42191771-42192160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 174
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:42361317-42361703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:42502614-42503009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 165
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:51161663-51162051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:54788792-54789182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 173
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:63288829-63288436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 172
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr2:81396872-81397265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 173
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr2:425096-425480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr2:16319521-16319911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 115
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr2:19212716-19212329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr2:32499553-32499160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr2:40312605-40312999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr2:48749394-48748999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 173
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr2:56830724-56830345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr2:60955712-60956096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr2:70023519-70023907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 151
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr2:77158026-77157640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 108
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:362443-362053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:841398-841787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:1063221-1063611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:1186767-1186378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 173
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:1199762-1199372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 175
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:1849347-1849736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 114
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:2065980-2065592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:2208579-2208189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:2603751-2604137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 229
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:3079340-3078950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:3623611-3624001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:4237459-4237069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:4340447-4340837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:4400042-4399652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:4833230-4832841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:4916968-4916578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:5117027-5117414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:5459632-5459234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:5597864-5598253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 173
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:5606491-5606869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 132
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:6003733-6003345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 171
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:6282659-6282274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:6539915-6539522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 170
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:6593798-6594188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:6945138-6945532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:7432738-7433128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 174
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:8121787-8122170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:8529760-8530150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:9688216-9687849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
202, 70
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:9714750-9715124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:10196190-10195797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:10262321-10261931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:10468714-10469104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 171
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:10565968-10566361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 159
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:10692098-10691717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:10729844-10729461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 70
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:11726462-11726852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:11813460-11813070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:11883943-11884332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 158
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:11899477-11899868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:12203416-12203806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:12221206-12220820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 106
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:12237935-12237547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
67, 120
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:12443048-12443437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:12736750-12736361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 92
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:12935160-12934767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:14710783-14710406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:14807010-14806619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 101
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:14853647-14854038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 179
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:14883599-14883998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 312
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:15686474-15686866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:15884785-15884395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:15963459-15963063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:15984070-15983681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:16172184-16171794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:16322425-16322812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:16326845-16326455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:16331269-16331666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 181
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:17118989-17118604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:17265346-17264955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:17940956-17940571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 278
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:18020824-18020431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:18350309-18349919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:18520733-18520351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:19288238-19287847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:19540342-19539952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:21169428-21169814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 134
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:21981668-21981278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:22080992-22081396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 135
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:22345107-22345493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:23492863-23493249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:23994936-23994547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:24130618-24130227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:24422940-24422551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 151
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:24928472-24928862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:25742183-25741795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:25885462-25885072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:25979185-25979575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:25992322-25992712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:26906330-26906720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 166
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:28646537-28646148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:28847661-28848051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:29955996-29955606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:29967246-29966856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:30816247-30816624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:30959220-30959609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 139
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:31501519-31501908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:31910692-31910307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
73, 36
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:32286521-32286133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 316
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:34592216-34591823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:35949326-35948965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:36104570-36104971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 181
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:36983741-36984130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:38260111-38259736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:38650339-38650729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:39119719-39120109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:39424900-39425290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 174
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:39630025-39629635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:39912855-39913251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 315
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:39936230-39936620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:40727692-40728082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 164
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:40729577-40729967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:41009344-41008962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:41157271-41157648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 7
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:41451549-41451943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 176
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:42363466-42363076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:42667618-42667228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 174
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:42939059-42938675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 70
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:43210219-43210609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:43978580-43978186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 313
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:44189493-44189887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:44221957-44222334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 169
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:44476400-44476010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:45913305-45912923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:47034595-47034197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 181
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:47181659-47181269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:47362172-47361805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:48721823-48722212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:48850153-48849763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:48887573-48887184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:49474990-49475380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:49630412-49630802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:49740858-49741247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:49905834-49905442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:50080653-50081042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:50327819-50328207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:50980083-50979688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:51226188-51225797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:51824264-51824655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 118
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:53182628-53182238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:53204036-53203656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:53557253-53557643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:54148376-54148766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:56112301-56112691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:56365857-56365468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:57557605-57557216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:58466146-58465756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:60051380-60050990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:62731613-62732003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:62999682-62999292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:63707061-63706669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 175
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:63752136-63752527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 163
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:64208964-64209371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 129
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:64531379-64531769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:65935121-65934731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:67635183-67635568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 157
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:68191263-68190903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
202, 37
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:70524845-70525233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:70669796-70670186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:70933865-70933473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 173
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:72693042-72693433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:72939665-72939277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 96
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:73187691-73188081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:74237576-74237192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 295
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:76341338-76340951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 166
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:77281267-77281652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 147
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:77468125-77467739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 51
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:77859407-77859797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:78362902-78363292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:78749866-78750252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 133
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:78906267-78906649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 151
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:79076373-79075978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:80161931-80161541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:80288665-80288274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 173
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:81259995-81260385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:82267998-82267614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 143
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:83887010-83887400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:84101581-84101193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:84964656-84964266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr2:86532599-86532989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr2:831077-831465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr2:16514113-16514505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr2:30388704-30389101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 166
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr2:31499323-31499717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 170
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr2:37396468-37396860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr2:46272144-46271764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 152
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr2:50352198-50352570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 91
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr2:53003125-53002734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr2:60947069-60947464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 161
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr2:63890151-63889766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 69
               

               
Conread position:
               
273-381
               

               
Cow position:
               
chr2:27172320-27172433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 95
               

               
Conread position:
               
273-391
               

               
Cow position:
               
chr2:75639148-75639026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
273-523
               

               
Cow position:
               
chr2:52128247-52127982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 171
               

               
Conread position:
               
273-632
               

               
Cow position:
               
chr2:26873694-26874064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 110
               

               
Conread position:
               
273-632
               

               
Cow position:
               
chr2:26878727-26879105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
273-635
               

               
Cow position:
               
chr2:12694582-12694204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 173
               

               
Conread position:
               
273-645
               

               
Cow position:
               
chr2:9591265-9591652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 173
               

               
Conread position:
               
273-645
               

               
Cow position:
               
chr2:23848477-23848092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 153
               

               
Conread position:
               
273-645
               

               
Cow position:
               
chr2:78854875-78855265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
71, 180
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr2:1988616-1989005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 171
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr2:25385512-25385896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
14, 115
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr2:27179460-27179848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 169
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr2:43473512-43473905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 172
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr2:44931927-44931546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 113
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr2:51406006-51406393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 124
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr2:68110387-68110027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 106
               

               
Conread position:
               
273-648
               

               
Cow position:
               
chr2:33080694-33080305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 154
               

               
Conread position:
               
274-431
               

               
Cow position:
               
chr2:15569004-15568840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
274-432
               

               
Cow position:
               
chr2:22254873-22254711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 149
               

               
Conread position:
               
274-472
               

               
Cow position:
               
chr2:9700615-9700817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
68, 171
               

               
Conread position:
               
274-642
               

               
Cow position:
               
chr2:53497568-53497188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
68, 100
               

               
Conread position:
               
274-646
               

               
Cow position:
               
chr2:15812023-15812398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
274-646
               

               
Cow position:
               
chr2:61052211-61052598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 170
               

               
Conread position:
               
274-647
               

               
Cow position:
               
chr2:31407254-31406866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 170
               

               
Conread position:
               
274-647
               

               
Cow position:
               
chr2:38335466-38335855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 167
               

               
Conread position:
               
274-647
               

               
Cow position:
               
chr2:51921475-51921083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
274-647
               

               
Cow position:
               
chr2:55162164-55161773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
274-647
               

               
Cow position:
               
chr2:55164215-55163824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
274-647
               

               
Cow position:
               
chr2:56081768-56082156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 170
               

               
Conread position:
               
274-647
               

               
Cow position:
               
chr2:57516577-57516965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 170
               

               
Conread position:
               
275-421
               

               
Cow position:
               
chr2:43621210-43621059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
275-471
               

               
Cow position:
               
chr2:25930319-25930130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 117
               

               
Conread position:
               
275-584
               

               
Cow position:
               
chr2:72789919-72789603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
67, 104
               

               
Conread position:
               
275-643
               

               
Cow position:
               
chr2:2688467-2688856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 170
               

               
Conread position:
               
275-647
               

               
Cow position:
               
chr2:4450959-4450573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 170
               

               
Conread position:
               
275-647
               

               
Cow position:
               
chr2:5297065-5297454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 130
               

               
Conread position:
               
275-647
               

               
Cow position:
               
chr2:9173938-9173545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 137
               

               
Conread position:
               
276-645
               

               
Cow position:
               
chr2:15488784-15488394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 169
               

               
Conread position:
               
277-395
               

               
Cow position:
               
chr2:15061967-15061847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 102
               

               
Conread position:
               
277-502
               

               
Cow position:
               
chr2:24435811-24435583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
5, 171
               

               
Conread position:
               
277-547
               

               
Cow position:
               
chr2:243237-242965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 168
               

               
Conread position:
               
277-590
               

               
Cow position:
               
chr2:4255215-4254888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 168
               

               
Conread position:
               
277-605
               

               
Cow position:
               
chr2:20979680-20980024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 168
               

               
Conread position:
               
277-632
               

               
Cow position:
               
chr2:62819384-62819013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
277-634
               

               
Cow position:
               
chr2:40540619-40540995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
277-645
               

               
Cow position:
               
chr2:16018953-16018566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
277-647
               

               
Cow position:
               
chr2:9528501-9528884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 165
               

               
Conread position:
               
277-647
               

               
Cow position:
               
chr2:16308716-16309100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
277-647
               

               
Cow position:
               
chr2:32409172-32408797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 168
               

               
Conread position:
               
278-403
               

               
Cow position:
               
chr2:50019631-50019761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 115
               
UCSC Genome Browser

               
Conread position:
               
278-628
               

               
Cow position:
               
chr2:29383786-29383410 (view  custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               
UCSC Genome Browser

               
               
               
Conread position:
278-634

               
               
               
Cow position:
chr2:41162341-41162707 (view  custom track)

               
               
               
Alignm length:
373

               
               
               
Alignm identity:
257

               
               
               
Alignm E-value:
9.99995e-41

               
               
               
Alignm gaps (pig, cow):
59, 9
UCSC Genome Browser

               
               
               
Conread position:
278-647

               
               
               
Cow position:
chr2:34572137-34571753 (view  custom track)

               
               
               
Alignm length:
389

               
               
               
Alignm identity:
288

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
60, 114

               
               
               Conread position:278-647
               
               
               Cow position:chr2:38343803-38344192 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:395
               
               
               Alignm identity:266
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):9, 110

               
               
               Conread position:279-459
               
               
               Cow position:chr2:72680420-72680234 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:131
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:279-473
               
               
               Cow position:chr2:32045940-32046138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:166
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):63, 165

               
               
               Conread position:279-559
               
               
               Cow position:chr2:193786-193491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:210
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):63, 102

               
               
               Conread position:279-618
               
               
               Cow position:chr2:29031917-29032269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:238
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):19, 156

               
               
               Conread position:279-645
               
               
               Cow position:chr2:12331029-12331408 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:385
               
               
               Alignm identity:259
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):20, 111

               
               
               Conread position:279-646
               
               
               Cow position:chr2:25025309-25025693 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):63, 107

               
               
               Conread position:279-647
               
               
               Cow position:chr2:59397721-59397344 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:292
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):65, 138

               
               
               Conread position:279-647
               
               
               Cow position:chr2:85739462-85739845 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):63, 164

               
               
               Conread position:279-648
               
               
               Cow position:chr2:57054931-57055313 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:387
               
               
               Alignm identity:277
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):63, 106

               
               
               Conread position:280-443
               
               
               Cow position:chr2:43609914-43609750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:127
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):64, 32

               
               
               Conread position:280-645
               
               
               Cow position:chr2:76123253-76122885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):179, 60

               
               
               Conread position:281-469
               
               
               Cow position:chr2:28767981-28767789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:113
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):60, 135

               
               
               Conread position:281-470
               
               
               Cow position:chr2:9190443-9190250 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:154
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):61, 163

               
               
               Conread position:281-473
               
               
               Cow position:chr2:4416970-4416771 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):34, 14

               
               
               Conread position:281-555
               
               
               Cow position:chr2:31381509-31381796 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:214
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):61, 163

               
               
               Conread position:281-621
               
               
               Cow position:chr2:66615614-66615255 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:363
               
               
               Alignm identity:264
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 14

               
               
               Conread position:281-624
               
               
               Cow position:chr2:31272554-31272196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:361
               
               
               Alignm identity:272
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):60, 163

               
               
               Conread position:281-625
               
               
               Cow position:chr2:28616987-28616631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:361
               
               
               Alignm identity:251
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):61, 7

               
               
               Conread position:281-635
               
               
               Cow position:chr2:49481255-49480880 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:258
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):60, 160

               
               
               Conread position:281-647
               
               
               Cow position:chr2:6978470-6978087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 165

               
               
               Conread position:281-647
               
               
               Cow position:chr2:32113635-32113257 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:281
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):63, 97

               
               
               Conread position:281-647
               
               
               Cow position:chr2:33288027-33287645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:385
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 163

               
               
               Conread position:281-647
               
               
               Cow position:chr2:33752828-33753209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:284
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 163

               
               
               Conread position:281-647
               
               
               Cow position:chr2:37008753-37009133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 292

               
               
               Conread position:281-647
               
               
               Cow position:chr2:46350781-46350401 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 161

               
               
               Conread position:281-647
               
               
               Cow position:chr2:49449557-49449174 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:389
               
               
               Alignm identity:276
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 168

               
               
               Conread position:283-472
               
               
               Cow position:chr2:21698014-21698200 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:137
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):61, 76

               
               
               Conread position:283-473
               
               
               Cow position:chr2:12178219-12178411 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):58, 141

               
               
               Conread position:283-645
               
               
               Cow position:chr2:62225515-62225895 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:278
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 158

               
               
               Conread position:283-647
               
               
               Cow position:chr2:20946685-20947063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:279
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):61, 162

               
               
               Conread position:283-647
               
               
               Cow position:chr2:24270558-24270939 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:290
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):59, 163

               
               
               Conread position:283-647
               
               
               Cow position:chr2:27146009-27145646 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:260
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):59, 102

               
               
               Conread position:283-647
               
               
               Cow position:chr2:31783284-31783659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:273
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):58, 140

               
               
               Conread position:284-472
               
               
               Cow position:chr2:41460455-41460634 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:134
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:284-647
               
               
               Cow position:chr2:41184404-41184781 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:381
               
               
               Alignm identity:276
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):58, 160

               
               
               Conread position:285-555
               
               
               Cow position:chr2:48590646-48590925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:209
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):59, 101

               
               
               Conread position:285-647
               
               
               Cow position:chr2:56205769-56205413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:248
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):50, 41

               
               
               Conread position:286-437
               
               
               Cow position:chr2:6038385-6038541 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:128
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:286-468
               
               
               Cow position:chr2:24593182-24593368 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:142
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):55, 100

               
               
               Conread position:286-470
               
               
               Cow position:chr2:56797905-56797722 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:143
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):50, 104

               
               
               Conread position:286-471
               
               
               Cow position:chr2:9042556-9042366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):58, 120

               
               
               Conread position:286-472
               
               
               Cow position:chr2:25589913-25589725 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:161
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):58, 126

               
               
               Conread position:286-472
               
               
               Cow position:chr2:63274574-63274389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):56, 35

               
               
               Conread position:286-473
               
               
               Cow position:chr2:42838978-42838788 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:156
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):56, 157

               
               
               Conread position:286-473
               
               
               Cow position:chr2:52806550-52806741 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):56, 158

               
               
               Conread position:286-474
               
               
               Cow position:chr2:70776733-70776542 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:153
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):56, 158

               
               
               Conread position:286-504
               
               
               Cow position:chr2:50407194-50407409 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:170
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):56, 158

               
               
               Conread position:286-594
               
               
               Cow position:chr2:12286297-12286619 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):58, 158

               
               
               Conread position:286-611
               
               
               Cow position:chr2:4007603-4007949 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:245
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:286-633
               
               
               Cow position:chr2:14206928-14206568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:273
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 158

               
               
               Conread position:286-634
               
               
               Cow position:chr2:10183129-10182772 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:361
               
               
               Alignm identity:272
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):188, 132

               
               
               Conread position:286-642
               
               
               Cow position:chr2:64972401-64972763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:266
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):174, 50

               
               
               Conread position:286-644
               
               
               Cow position:chr2:1202510-1202857 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 141

               
               
               Conread position:286-647
               
               
               Cow position:chr2:279148-278776 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:278
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 11

               
               
               Conread position:286-647
               
               
               Cow position:chr2:549976-549604 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:278
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 157

               
               
               Conread position:286-647
               
               
               Cow position:chr2:982116-982492 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 158

               
               
               Conread position:286-647
               
               
               Cow position:chr2:3440638-3441019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:385
               
               
               Alignm identity:258
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):56, 158

               
               
               Conread position:286-647
               
               
               Cow position:chr2:7193537-7193920 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:394
               
               
               Alignm identity:278
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):56, 28

               
               
               Conread position:286-647
               
               
               Cow position:chr2:16387050-16387413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:369
               
               
               Alignm identity:260
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 50

               
               
               Conread position:286-647
               
               
               Cow position:chr2:21661820-21662196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 158

               
               
               Conread position:286-647
               
               
               Cow position:chr2:32417533-32417155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):58, 161

               
               
               Conread position:286-647
               
               
               Cow position:chr2:44094467-44094840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 158

               
               
               Conread position:286-647
               
               
               Cow position:chr2:45354042-45353666 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:279
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 158

               
               
               Conread position:286-647
               
               
               Cow position:chr2:46252995-46252620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:281
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 160

               
               
               Conread position:286-647
               
               
               Cow position:chr2:55876741-55877118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:381
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):58, 98

               
               
               Conread position:286-647
               
               
               Cow position:chr2:56306732-56306359 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 137

               
               
               Conread position:286-647
               
               
               Cow position:chr2:62238935-62239309 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:266
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):185, 55

               
               
               Conread position:286-647
               
               
               Cow position:chr2:62501989-62501604 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:391
               
               
               Alignm identity:266
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):52, 101

               
               
               Conread position:286-647
               
               
               Cow position:chr2:75364816-75364429 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:390
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 170

               
               
               Conread position:286-647
               
               
               Cow position:chr2:79242125-79241735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:394
               
               
               Alignm identity:268
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):56, 154

               
               
               Conread position:286-648
               
               
               Cow position:chr2:19809701-19810075 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 98

               
               
               Conread position:286-648
               
               
               Cow position:chr2:54797810-54797436 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:381
               
               
               Alignm identity:253
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):53, 102

               
               
               Conread position:287-415
               
               
               Cow position:chr2:33251500-33251381 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:103
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:287-473
               
               
               Cow position:chr2:26260291-26260101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):57, 157

               
               
               Conread position:287-624
               
               
               Cow position:chr2:24105866-24106226 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:247
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):57, 296

               
               
               Conread position:287-647
               
               
               Cow position:chr2:9358110-9357728 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:280
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):57, 157

               
               
               Conread position:287-647
               
               
               Cow position:chr2:49285005-49285380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:378
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 157

               
               
               Conread position:287-647
               
               
               Cow position:chr2:69223891-69223514 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 16

               
               
               Conread position:288-420
               
               
               Cow position:chr2:30353021-30352886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:112
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):54, 26

               
               
               Conread position:288-421
               
               
               Cow position:chr2:70894884-70895019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:109
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:288-437
               
               
               Cow position:chr2:44050406-44050553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:120
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:288-472
               
               
               Cow position:chr2:10640160-10640351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):28, 58

               
               
               Conread position:288-472
               
               
               Cow position:chr2:24126577-24126390 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):59, 155

               
               
               Conread position:288-473
               
               
               Cow position:chr2:43994305-43994495 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):56, 157

               
               
               Conread position:288-581
               
               
               Cow position:chr2:28796955-28797259 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:227
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 97

               
               
               Conread position:288-622
               
               
               Cow position:chr2:944113-944457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:248
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):56, 84

               
               
               Conread position:288-622
               
               
               Cow position:chr2:16313893-16314228 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:246
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 99

               
               
               Conread position:288-642
               
               
               Cow position:chr2:31456833-31457203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:269
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 151

               
               
               Conread position:288-644
               
               
               Cow position:chr2:32455355-32454976 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:386
               
               
               Alignm identity:266
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):34, 82

               
               
               Conread position:288-647
               
               
               Cow position:chr2:10744126-10743759 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:285
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):54, 102

               
               
               Conread position:288-647
               
               
               Cow position:chr2:11696482-11696851 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:381
               
               
               Alignm identity:268
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):54, 27

               
               
               Conread position:288-647
               
               
               Cow position:chr2:45517742-45518115 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:273
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):54, 139

               
               
               Conread position:288-647
               
               
               Cow position:chr2:49849482-49849856 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:281
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 156

               
               
               Conread position:288-648
               
               
               Cow position:chr2:27076066-27076425 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:269
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):54, 106

               
               
               Conread position:289-472
               
               
               Cow position:chr2:13682952-13683138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:150
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):55, 134

               
               
               Conread position:289-516
               
               
               Cow position:chr2:2204802-2204587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:159
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):179, 48

               
               
               Conread position:289-522
               
               
               Cow position:chr2:4817922-4818171 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):52, 155

               
               
               Conread position:289-584
               
               
               Cow position:chr2:78356608-78356925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:234
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):51, 163

               
               
               Conread position:289-623
               
               
               Cow position:chr2:55480903-55480560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:253
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 27

               
               
               Conread position:289-647
               
               
               Cow position:chr2:4394555-4394184 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:275
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):53, 154

               
               
               Conread position:290-414
               
               
               Cow position:chr2:33392141-33392015 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:98
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:290-643
               
               
               Cow position:chr2:41710081-41710441 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:372
               
               
               Alignm identity:265
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):51, 90

               
               
               Conread position:290-647
               
               
               Cow position:chr2:778347-777977 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:376
               
               
               Alignm identity:274
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):52, 133

               
               
               Conread position:290-647
               
               
               Cow position:chr2:12424778-12424406 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:283
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):51, 154

               
               
               Conread position:290-647
               
               
               Cow position:chr2:46309459-46309822 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:268
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):52, 157

               
               
               Conread position:290-647
               
               
               Cow position:chr2:50418632-50419011 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:381
               
               
               Alignm identity:263
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):54, 156

               
               
               Conread position:290-647
               
               
               Cow position:chr2:76984811-76984441 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):54, 158

               
               
               Conread position:291-561
               
               
               Cow position:chr2:30112441-30112155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):51, 153

               
               
               Conread position:291-647
               
               
               Cow position:chr2:50862124-50861753 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:374
               
               
               Alignm identity:281
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):51, 153

               
               
               Conread position:292-471
               
               
               Cow position:chr2:28711682-28711494 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:141
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):50, 75

               
               
               Conread position:292-546
               
               
               Cow position:chr2:42581918-42582188 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):50, 154

               
               
               Conread position:292-639
               
               
               Cow position:chr2:16072072-16071723 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:356
               
               
               Alignm identity:256
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):50, 98

               
               
               Conread position:292-647
               
               
               Cow position:chr2:14825631-14825999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:375
               
               
               Alignm identity:282
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):23, 114

               
               
               Conread position:292-647
               
               
               Cow position:chr2:46798793-46799163 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:271
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):50, 153

               
               
               Conread position:292-647
               
               
               Cow position:chr2:79111518-79111888 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:279
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):49, 152

               
               
               Conread position:293-647
               
               
               Cow position:chr2:38272893-38273255 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:248
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):49, 137

               
               
               Conread position:294-646
               
               
               Cow position:chr2:23348161-23348527 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:370
               
               
               Alignm identity:274
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 91

               
               
               Conread position:295-647
               
               
               Cow position:chr2:17186080-17185704 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:379
               
               
               Alignm identity:269
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):49, 150

               
               
               Conread position:297-468
               
               
               Cow position:chr2:80584999-80585173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:145
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):47, 147

               
               
               Conread position:297-601
               
               
               Cow position:chr2:29908029-29907711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:246
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):44, 98

               
               
               Conread position:297-647
               
               
               Cow position:chr2:2100229-2099863 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:370
               
               
               Alignm identity:270
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):45, 147

               
               
               Conread position:298-472
               
               
               Cow position:chr2:71119548-71119723 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):46, 75

               
               
               Conread position:298-647
               
               
               Cow position:chr2:57706689-57707054 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:271
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):7, 148

               
               
               Conread position:299-472
               
               
               Cow position:chr2:53031193-53031370 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):43, 145

               
               
               Conread position:299-647
               
               
               Cow position:chr2:21042216-21042570 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:360
               
               
               Alignm identity:271
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):176, 130

               
               
               Conread position:300-646
               
               
               Cow position:chr2:67724764-67724411 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:355
               
               
               Alignm identity:271
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):42, 266

               
               
               Conread position:300-647
               
               
               Cow position:chr2:4151309-4151671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:271
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):42, 144

               
               
               Conread position:301-622
               
               
               Cow position:chr2:65864330-65864670 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:245
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):41, 142

               
               
               Conread position:301-625
               
               
               Cow position:chr2:54655249-54654930 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:228
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):41, 107

               
               
               Conread position:301-647
               
               
               Cow position:chr2:38376242-38376602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:370
               
               
               Alignm identity:256
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):43, 15

               
               
               Conread position:301-647
               
               
               Cow position:chr2:52386581-52386207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:271
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):41, 203

               
               
               Conread position:302-416
               
               
               Cow position:chr2:55892418-55892537 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:120
               
               
               Alignm identity:99
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):40, 0

               
               
               Conread position:302-470
               
               
               Cow position:chr2:55919103-55919275 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):40, 142

               
               
               Conread position:302-513
               
               
               Cow position:chr2:81350189-81349961 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:169
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):42, 108

               
               
               Conread position:302-646
               
               
               Cow position:chr2:16717791-16717431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:363
               
               
               Alignm identity:274
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):40, 141

               
               
               Conread position:303-473
               
               
               Cow position:chr2:63332539-63332366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):39, 96

               
               
               Conread position:303-584
               
               
               Cow position:chr2:46226439-46226727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:204
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):165, 42

               
               
               Conread position:303-647
               
               
               Cow position:chr2:31857630-31857267 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:262
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):39, 141

               
               
               Conread position:303-647
               
               
               Cow position:chr2:58024680-58025027 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:360
               
               
               Alignm identity:257
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):39, 85

               
               
               Conread position:303-647
               
               
               Cow position:chr2:68488649-68488290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:264
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):41, 143

               
               
               Conread position:304-643
               
               
               Cow position:chr2:6055229-6055583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:238
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):38, 14

               
               
               Conread position:305-473
               
               
               Cow position:chr2:76561235-76561407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):39, 137

               
               
               Conread position:305-622
               
               
               Cow position:chr2:10868551-10868216 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:251
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 135

               
               
               Conread position:305-646
               
               
               Cow position:chr2:1961835-1962195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:364
               
               
               Alignm identity:266
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 143

               
               
               Conread position:305-648
               
               
               Cow position:chr2:43358642-43358285 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:251
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 139

               
               
               Conread position:306-641
               
               
               Cow position:chr2:86307484-86307143 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:235
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):38, 147

               
               
               Conread position:306-647
               
               
               Cow position:chr2:1657651-1657995 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:255
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):38, 129

               
               
               Conread position:306-647
               
               
               Cow position:chr2:3173529-3173885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:268
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):36, 139

               
               
               Conread position:306-647
               
               
               Cow position:chr2:12185396-12185743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:261
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):38, 138

               
               
               Conread position:307-647
               
               
               Cow position:chr2:24723570-24723215 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:265
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):34, 138

               
               
               Conread position:307-647
               
               
               Cow position:chr2:29380538-29380183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:261
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):34, 138

               
               
               Conread position:307-647
               
               
               Cow position:chr2:47783746-47784089 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:255
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):77, 34

               
               
               Conread position:308-478
               
               
               Cow position:chr2:27318006-27318179 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:131
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):34, 136

               
               
               Conread position:308-601
               
               
               Cow position:chr2:8575735-8575426 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:224
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):33, 55

               
               
               Conread position:308-647
               
               
               Cow position:chr2:11152866-11152512 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:357
               
               
               Alignm identity:269
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):34, 136

               
               
               Conread position:308-647
               
               
               Cow position:chr2:11616410-11616767 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:362
               
               
               Alignm identity:265
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):33, 204

               
               
               Conread position:308-647
               
               
               Cow position:chr2:31506493-31506143 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:357
               
               
               Alignm identity:272
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):34, 136

               
               
               Conread position:308-647
               
               
               Cow position:chr2:67187730-67187374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:359
               
               
               Alignm identity:257
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):30, 139

               
               
               Conread position:309-640
               
               
               Cow position:chr2:6063783-6063443 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:348
               
               
               Alignm identity:241
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):36, 107

               
               
               Conread position:309-647
               
               
               Cow position:chr2:18620743-18621076 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:352
               
               
               Alignm identity:234
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):12, 48

               
               
               Conread position:309-647
               
               
               Cow position:chr2:28611731-28611375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:361
               
               
               Alignm identity:269
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):31, 115

               
               
               Conread position:309-647
               
               
               Cow position:chr2:28681559-28681194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:264
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):34, 144

               
               
               Conread position:309-647
               
               
               Cow position:chr2:39116944-39117283 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:234
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):28, 134

               
               
               Conread position:309-647
               
               
               Cow position:chr2:78765844-78766197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:356
               
               
               Alignm identity:258
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):30, 136

               
               
               Conread position:311-578
               
               
               Cow position:chr2:46450142-46450425 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:202
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):31, 68

               
               
               Conread position:311-647
               
               
               Cow position:chr2:50812733-50813079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:348
               
               
               Alignm identity:258
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):31, 257

               
               
               Conread position:313-472
               
               
               Cow position:chr2:11733601-11733756 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:313-646
               
               
               Cow position:chr2:2672895-2673239 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:255
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):29, 64

               
               
               Conread position:314-471
               
               
               Cow position:chr2:6698124-6697962 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:136
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):30, 132

               
               
               Conread position:314-473
               
               
               Cow position:chr2:54699766-54699926 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:126
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):30, 79

               
               
               Conread position:314-635
               
               
               Cow position:chr2:54469430-54469092 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:236
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):30, 73

               
               
               Conread position:314-646
               
               
               Cow position:chr2:23639825-23640166 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:351
               
               
               Alignm identity:243
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):30, 94

               
               
               Conread position:316-647
               
               
               Cow position:chr2:6911375-6911705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:251
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):26, 84

               
               
               Conread position:317-634
               
               
               Cow position:chr2:39280574-39280894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:251
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):154, 25

               
               
               Conread position:317-646
               
               
               Cow position:chr2:469009-469360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:243
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):25, 130

               
               
               Conread position:317-646
               
               
               Cow position:chr2:37120564-37120903 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:347
               
               
               Alignm identity:260
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):25, 13

               
               
               Conread position:317-647
               
               
               Cow position:chr2:7506251-7505905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:260
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):6, 129

               
               
               Conread position:318-565
               
               
               Cow position:chr2:2908937-2909201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):24, 126

               
               
               Conread position:319-647
               
               
               Cow position:chr2:36397305-36397645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:249
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):22, 122

               
               
               Conread position:320-647
               
               
               Cow position:chr2:2558643-2558985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:257
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 125

               
               
               Conread position:320-647
               
               
               Cow position:chr2:19493588-19493919 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:245
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):149, 17

               
               
               Conread position:321-615
               
               
               Cow position:chr2:36435397-36435697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:221
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):11, 5

               
               
               Conread position:321-615
               
               
               Cow position:chr2:36467545-36467845 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:220
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):11, 5

               
               
               Conread position:321-635
               
               
               Cow position:chr2:38914891-38914574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:207
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):21, 31

               
               
               Conread position:321-646
               
               
               Cow position:chr2:41725008-41725351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:346
               
               
               Alignm identity:226
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):153, 18

               
               
               Conread position:321-647
               
               
               Cow position:chr2:356178-355841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):153, 64

               
               
               Conread position:321-647
               
               
               Cow position:chr2:45051308-45050973 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:339
               
               
               Alignm identity:234
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):154, 44

               
               
               Conread position:321-647
               
               
               Cow position:chr2:78832551-78832210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:249
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):21, 124

               
               
               Conread position:323-473
               
               
               Cow position:chr2:35883187-35883041 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):13, 21

               
               
               Conread position:328-646
               
               
               Cow position:chr2:59953465-59953139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):160, 23

               
               
               Conread position:331-635
               
               
               Cow position:chr2:47116513-47116202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:220
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):138, 36

               
               
               Conread position:337-561
               
               
               Cow position:chr2:53574527-53574761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:181
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):131, 102

               
               
               Conread position:341-473
               
               
               Cow position:chr2:16052840-16052709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:105
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:341-473
               
               
               Cow position:chr2:48718529-48718398 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:106
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:341-647
               
               
               Cow position:chr2:2430995-2430679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:233
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):134, 106

               
               
               Conread position:341-647
               
               
               Cow position:chr2:20933106-20933405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:214
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):99, 0

               
               
               Conread position:341-647
               
               
               Cow position:chr2:26129676-26129360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:238
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):134, 99

               
               
               Conread position:341-647
               
               
               Cow position:chr2:41916021-41915710 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:246
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):128, 18

               
               
               Conread position:341-647
               
               
               Cow position:chr2:65306047-65306363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):134, 99

               
               
               Conread position:342-437
               
               
               Cow position:chr2:15808151-15808246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:96
               
               
               Alignm identity:84
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:342-472
               
               
               Cow position:chr2:78743884-78744009 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:103
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:342-647
               
               
               Cow position:chr2:45562854-45563169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):39, 74

               
               
               Conread position:342-647
               
               
               Cow position:chr2:56059015-56059330 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:240
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):128, 98

               
               
               Conread position:342-647
               
               
               Cow position:chr2:62663333-62663648 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:238
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):133, 98

               
               
               Conread position:342-647
               
               
               Cow position:chr2:70396274-70396583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:200
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):15, 19

               
               
               Conread position:343-473
               
               
               Cow position:chr2:79403269-79403398 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:131
               
               
               Alignm identity:105
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:344-647
               
               
               Cow position:chr2:13006456-13006763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:244
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):131, 50

               
               
               Conread position:345-584
               
               
               Cow position:chr2:80796299-80796553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:191
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):129, 93

               
               
               Conread position:345-647
               
               
               Cow position:chr2:14748839-14749153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:227
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):120, 37

               
               
               Conread position:346-624
               
               
               Cow position:chr2:47008944-47008661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:211
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):127, 84

               
               
               Conread position:346-647
               
               
               Cow position:chr2:25216640-25216958 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:217
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):121, 94

               
               
               Conread position:347-563
               
               
               Cow position:chr2:104366-104140 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:162
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):80, 101

               
               
               Conread position:347-611
               
               
               Cow position:chr2:64318701-64318431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:200
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):119, 20

               
               
               Conread position:347-647
               
               
               Cow position:chr2:36073550-36073240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):121, 93

               
               
               Conread position:348-645
               
               
               Cow position:chr2:9242305-9242609 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:207
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):38, 80

               
               
               Conread position:348-647
               
               
               Cow position:chr2:45312510-45312199 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:225
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):127, 46

               
               
               Conread position:349-501
               
               
               Cow position:chr2:78300962-78300810 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:112
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):35, 91

               
               
               Conread position:349-647
               
               
               Cow position:chr2:7629516-7629208 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:233
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):126, 91

               
               
               Conread position:349-647
               
               
               Cow position:chr2:31299297-31299605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):126, 91

               
               
               Conread position:349-647
               
               
               Cow position:chr2:50061074-50061382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:233
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):126, 91

               
               
               Conread position:349-647
               
               
               Cow position:chr2:81927245-81927568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:239
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):124, 90

               
               
               Conread position:351-472
               
               
               Cow position:chr2:84088399-84088519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:122
               
               
               Alignm identity:98
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:351-647
               
               
               Cow position:chr2:29802727-29802416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):7, 90

               
               
               Conread position:351-647
               
               
               Cow position:chr2:39662111-39662413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:227
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):32, 62

               
               
               Conread position:351-648
               
               
               Cow position:chr2:3737713-3738020 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:203
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):43, 24

               
               
               Conread position:352-472
               
               
               Cow position:chr2:40980895-40980776 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:96
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:352-473
               
               
               Cow position:chr2:1992454-1992334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:122
               
               
               Alignm identity:99
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:352-473
               
               
               Cow position:chr2:7906337-7906457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:122
               
               
               Alignm identity:98
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):81, 0

               
               
               Conread position:352-592
               
               
               Cow position:chr2:69106095-69105846 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):111, 87

               
               
               Conread position:353-647
               
               
               Cow position:chr2:5914215-5914519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):121, 87

               
               
               Conread position:353-647
               
               
               Cow position:chr2:15970656-15970960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:227
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):122, 87

               
               
               Conread position:354-473
               
               
               Cow position:chr2:576959-577079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:122
               
               
               Alignm identity:100
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):22, 87

               
               
               Conread position:354-647
               
               
               Cow position:chr2:5998326-5998628 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):115, 36

               
               
               Conread position:354-648
               
               
               Cow position:chr2:32357385-32357689 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):121, 86

               
               
               Conread position:355-561
               
               
               Cow position:chr2:62684288-62684501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:155
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):107, 84

               
               
               Conread position:356-484
               
               
               Cow position:chr2:47143800-47143926 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:99
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:356-645
               
               
               Cow position:chr2:85496933-85496636 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:212
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):118, 84

               
               
               Conread position:356-648
               
               
               Cow position:chr2:52178162-52177861 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:218
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):119, 91

               
               
               Conread position:357-473
               
               
               Cow position:chr2:18296619-18296736 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:119
               
               
               Alignm identity:95
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):19, 84

               
               
               Conread position:357-621
               
               
               Cow position:chr2:66480921-66480636 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:213
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):113, 33

               
               
               Conread position:357-646
               
               
               Cow position:chr2:62564273-62563972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:208
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):115, 25

               
               
               Conread position:357-647
               
               
               Cow position:chr2:13579658-13579958 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):23, 84

               
               
               Conread position:357-647
               
               
               Cow position:chr2:36056382-36056082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:220
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 84

               
               
               Conread position:357-647
               
               
               Cow position:chr2:42292337-42292639 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:222
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):115, 73

               
               
               Conread position:357-647
               
               
               Cow position:chr2:70944821-70945113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:216
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):63, 84

               
               
               Conread position:357-647
               
               
               Cow position:chr2:76314437-76314140 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:222
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):25, 215

               
               
               Conread position:358-647
               
               
               Cow position:chr2:26483430-26483131 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):117, 82

               
               
               Conread position:358-647
               
               
               Cow position:chr2:54810993-54811289 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):130, 81

               
               
               Conread position:359-642
               
               
               Cow position:chr2:15059633-15059353 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:207
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):122, 80

               
               
               Conread position:359-647
               
               
               Cow position:chr2:52485564-52485273 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):85, 111

               
               
               Conread position:359-647
               
               
               Cow position:chr2:65604510-65604212 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:227
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):116, 80

               
               
               Conread position:360-647
               
               
               Cow position:chr2:29611981-29612280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:227
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):107, 80

               
               
               Conread position:360-647
               
               
               Cow position:chr2:33492663-33492365 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 81

               
               
               Conread position:361-644
               
               
               Cow position:chr2:73095585-73095294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:214
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):66, 22

               
               
               Conread position:364-647
               
               
               Cow position:chr2:30140799-30141094 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:210
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:364-647
               
               
               Cow position:chr2:39855207-39855502 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:209
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):110, 57

               
               
               Conread position:366-645
               
               
               Cow position:chr2:28319929-28319645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:203
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):64, 90

               
               
               Conread position:367-647
               
               
               Cow position:chr2:37742728-37743019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:216
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):103, 73

               
               
               Conread position:367-647
               
               
               Cow position:chr2:48360916-48361204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:205
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):107, 73

               
               
               Conread position:368-645
               
               
               Cow position:chr2:43826169-43826456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:214
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):100, 71

               
               
               Conread position:368-646
               
               
               Cow position:chr2:894278-893990 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):106, 72

               
               
               Conread position:369-621
               
               
               Cow position:chr2:82259426-82259167 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:178
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):106, 69

               
               
               Conread position:369-646
               
               
               Cow position:chr2:14218191-14218478 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:208
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):15, 72

               
               
               Conread position:369-647
               
               
               Cow position:chr2:46360080-46359785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:212
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):88, 63

               
               
               Conread position:370-647
               
               
               Cow position:chr2:34705343-34705057 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:204
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):97, 11

               
               
               Conread position:372-647
               
               
               Cow position:chr2:5317958-5317673 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:209
               
               
               Alignm E-value:6.02558e-44
               
               
               Alignm gaps (pig, cow):103, 68

               
               
               Conread position:372-647
               
               
               Cow position:chr2:9370367-9370081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:207
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):102, 68

               
               
               Conread position:372-647
               
               
               Cow position:chr2:32219046-32219331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):103, 68

               
               
               Conread position:372-647
               
               
               Cow position:chr2:49300626-49300342 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:207
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):95, 32

               
               
               Conread position:372-647
               
               
               Cow position:chr2:68869460-68869175 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:207
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):98, 68

               
               
               Conread position:373-648
               
               
               Cow position:chr2:50431259-50430974 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:208
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):102, 67

               
               
               Conread position:375-635
               
               
               Cow position:chr2:71494794-71495070 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):97, 72

               
               
               Conread position:375-645
               
               
               Cow position:chr2:11235418-11235128 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:203
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):11, 67

               
               
               Conread position:375-646
               
               
               Cow position:chr2:18049890-18049619 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:188
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):127, 66

               
               
               Conread position:375-647
               
               
               Cow position:chr2:10738345-10738066 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:210
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):99, 73

               
               
               Conread position:375-647
               
               
               Cow position:chr2:18997175-18997453 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:208
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):100, 65

               
               
               Conread position:375-647
               
               
               Cow position:chr2:31645568-31645850 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):100, 65

               
               
               Conread position:375-647
               
               
               Cow position:chr2:53659086-53658802 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:211
               
               
               Alignm E-value:6.02558e-44
               
               
               Alignm gaps (pig, cow):99, 65

               
               
               Conread position:375-647
               
               
               Cow position:chr2:64830112-64830393 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:203
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):97, 65

               
               
               Conread position:375-647
               
               
               Cow position:chr2:72527395-72527669 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:200
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):89, 72

               
               
               Conread position:376-632
               
               
               Cow position:chr2:35135412-35135677 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:192
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):93, 64

               
               
               Conread position:376-647
               
               
               Cow position:chr2:44483200-44482931 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):162, 63

               
               
               Conread position:376-647
               
               
               Cow position:chr2:46302410-46302139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):142, 71

               
               
               Conread position:378-647
               
               
               Cow position:chr2:73467064-73466799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):62, 0

               
               
               Conread position:379-645
               
               
               Cow position:chr2:5761256-5760987 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:197
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):109, 61

               
               
               Conread position:379-645
               
               
               Cow position:chr2:84996754-84997029 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:205
               
               
               Alignm E-value:6.02558e-44
               
               
               Alignm gaps (pig, cow):86, 61

               
               
               Conread position:380-646
               
               
               Cow position:chr2:72902832-72902557 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):89, 19

               
               
               Conread position:381-647
               
               
               Cow position:chr2:618707-618979 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:200
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):94, 34

               
               
               Conread position:381-647
               
               
               Cow position:chr2:38691885-38691611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):89, 18

               
               
               Conread position:383-647
               
               
               Cow position:chr2:12803209-12802935 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):91, 57

               
               
               Conread position:383-647
               
               
               Cow position:chr2:69237716-69237988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:192
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):92, 57

               
               
               Conread position:384-645
               
               
               Cow position:chr2:45543153-45542881 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:204
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):55, 188

               
               
               Conread position:384-647
               
               
               Cow position:chr2:21645012-21644738 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:208
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):24, 58

               
               
               Conread position:384-647
               
               
               Cow position:chr2:32078775-32078501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:196
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):25, 57

               
               
               Conread position:385-647
               
               
               Cow position:chr2:41445182-41445454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:195
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):90, 55

               
               
               Conread position:386-626
               
               
               Cow position:chr2:6950678-6950925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):88, 54

               
               
               Conread position:386-647
               
               
               Cow position:chr2:72184170-72183904 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):80, 22

               
               
               Conread position:387-647
               
               
               Cow position:chr2:30150869-30150599 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):88, 53

               
               
               Conread position:388-642
               
               
               Cow position:chr2:31119463-31119727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:199
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):81, 50

               
               
               Conread position:389-647
               
               
               Cow position:chr2:37806888-37807156 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:199
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):86, 50

               
               
               Conread position:390-647
               
               
               Cow position:chr2:1352660-1352394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):65, 22

               
               
               Conread position:390-647
               
               
               Cow position:chr2:39386426-39386161 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:190
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):85, 50

               
               
               Conread position:390-647
               
               
               Cow position:chr2:47454184-47453917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:193
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):37, 51

               
               
               Conread position:390-647
               
               
               Cow position:chr2:58310104-58310374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:201
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):27, 8

               
               
               Conread position:390-647
               
               
               Cow position:chr2:72714074-72713807 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:196
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):85, 50

               
               
               Conread position:391-647
               
               
               Cow position:chr2:12448326-12448068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):97, 36

               
               
               Conread position:393-647
               
               
               Cow position:chr2:29924283-29924547 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:197
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):82, 47

               
               
               Conread position:393-647
               
               
               Cow position:chr2:43625078-43624812 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:201
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):46, 179

               
               
               Conread position:393-647
               
               
               Cow position:chr2:61974234-61974493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:193
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):74, 47

               
               
               Conread position:394-648
               
               
               Cow position:chr2:31672732-31672994 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):38, 25

               
               
               Conread position:395-644
               
               
               Cow position:chr2:47137820-47138079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:176
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):72, 52

               
               
               Conread position:395-647
               
               
               Cow position:chr2:15216042-15216304 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):77, 33

               
               
               Conread position:396-643
               
               
               Cow position:chr2:50631970-50632226 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:184
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):71, 44

               
               
               Conread position:397-647
               
               
               Cow position:chr2:12950699-12950452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):108, 21

               
               
               Conread position:398-647
               
               
               Cow position:chr2:42236242-42236491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:147
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):67, 160

               
               
               Conread position:398-647
               
               
               Cow position:chr2:86004986-86004723 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:188
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:400-642
               
               
               Cow position:chr2:69657358-69657610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:184
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):75, 40

               
               
               Conread position:400-643
               
               
               Cow position:chr2:71624929-71624665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):70, 40

               
               
               Conread position:402-646
               
               
               Cow position:chr2:6270626-6270380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):56, 45

               
               
               Conread position:402-646
               
               
               Cow position:chr2:6273544-6273298 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):56, 45

               
               
               Conread position:402-647
               
               
               Cow position:chr2:12371028-12371283 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):73, 38

               
               
               Conread position:404-647
               
               
               Cow position:chr2:78518719-78518972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:186
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):71, 43

               
               
               Conread position:407-647
               
               
               Cow position:chr2:81931996-81931746 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):61, 40

               
               
               Conread position:408-645
               
               
               Cow position:chr2:26102212-26102464 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:190
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):67, 32

               
               
               Conread position:408-647
               
               
               Cow position:chr2:6638310-6638061 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):67, 32

               
               
               Conread position:410-646
               
               
               Cow position:chr2:43120571-43120814 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):58, 20

               
               
               Conread position:412-647
               
               
               Cow position:chr2:39815808-39815565 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):63, 28

               
               
               Conread position:414-647
               
               
               Cow position:chr2:1752503-1752745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):60, 26

               
               
               Conread position:418-647
               
               
               Cow position:chr2:16593805-16594044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):57, 22

               
               
               Conread position:418-647
               
               
               Cow position:chr2:16632134-16632373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):57, 22

               
               
               Conread position:418-647
               
               
               Cow position:chr2:31743086-31742847 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:175
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):57, 22

               
               
               Conread position:419-647
               
               
               Cow position:chr2:28750450-28750684 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):56, 21

               
               
               Conread position:420-647
               
               
               Cow position:chr2:39262962-39263207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):55, 20

               
               
               Conread position:421-644
               
               
               Cow position:chr2:46171390-46171158 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:172
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):54, 19

               
               
               Conread position:425-635
               
               
               Cow position:chr2:75226719-75226937 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:155
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):63, 15

               
               
               Conread position:426-619
               
               
               Cow position:chr2:43609597-43609405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):153, 14

               
               
               Conread position:427-647
               
               
               Cow position:chr2:47644554-47644778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):36, 13

               
               
               Conread position:441-647
               
               
               Cow position:chr2:16327998-16328208 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):128, 103

               
               
               Conread position:445-647
               
               
               Cow position:chr2:51414428-51414635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:145
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):94, 13

               
               
               Conread position:446-647
               
               
               Cow position:chr2:45463057-45462855 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:148
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):8, 13

               
               
               Conread position:447-645
               
               
               Cow position:chr2:50277539-50277735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:151
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):28, 74

               
               
               Conread position:450-647
               
               
               Cow position:chr2:32264882-32264688 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:136
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:453-643
               
               
               Cow position:chr2:65036893-65036697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):35, 111

               
               
               Conread position:453-648
               
               
               Cow position:chr2:46184754-46184558 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:141
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):35, 114

               
               
               Conread position:455-642
               
               
               Cow position:chr2:69420049-69419857 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):82, 28

               
               
               Conread position:457-645
               
               
               Cow position:chr2:2093574-2093761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:139
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):100, 0

               
               
               Conread position:457-647
               
               
               Cow position:chr2:14089307-14089495 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:143
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:458-647
               
               
               Cow position:chr2:42837707-42837520 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):113, 99

               
               
               Conread position:459-645
               
               
               Cow position:chr2:78197075-78197266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:134
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:461-647
               
               
               Cow position:chr2:9713592-9713404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):31, 99

               
               
               Conread position:461-648
               
               
               Cow position:chr2:16415424-16415609 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):97, 135

               
               
               Conread position:462-647
               
               
               Cow position:chr2:1939948-1939763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):12, 5

               
               
               Conread position:464-615
               
               
               Cow position:chr2:29052160-29052010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):27, 32

               
               
               Conread position:464-617
               
               
               Cow position:chr2:50765981-50766138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:118
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:464-619
               
               
               Cow position:chr2:971175-971328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):116, 93

               
               
               Conread position:464-642
               
               
               Cow position:chr2:13467238-13467415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:464-643
               
               
               Cow position:chr2:46909888-46909711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:129
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:464-644
               
               
               Cow position:chr2:82581397-82581218 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:133
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:464-645
               
               
               Cow position:chr2:35882794-35882615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:464-645
               
               
               Cow position:chr2:55387083-55387262 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:464-645
               
               
               Cow position:chr2:58248323-58248152 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:131
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):30, 0

               
               
               Conread position:464-645
               
               
               Cow position:chr2:77359008-77359194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:142
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):75, 101

               
               
               Conread position:464-645
               
               
               Cow position:chr2:82527281-82527102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:139
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):31, 94

               
               
               Conread position:464-646
               
               
               Cow position:chr2:14108995-14108820 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:464-646
               
               
               Cow position:chr2:19748944-19749123 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:135
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:464-646
               
               
               Cow position:chr2:35483780-35483969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):139, 93

               
               
               Conread position:464-646
               
               
               Cow position:chr2:43104893-43105074 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:134
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-646
               
               
               Cow position:chr2:58321258-58321071 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:135
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):51, 59

               
               
               Conread position:464-646
               
               
               Cow position:chr2:63865794-63865617 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:136
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):75, 95

               
               
               Conread position:464-647
               
               
               Cow position:chr2:1827274-1827085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:143
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):31, 134

               
               
               Conread position:464-647
               
               
               Cow position:chr2:1992181-1991999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:6070552-6070370 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:10124919-10124742 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):18, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:15568777-15568595 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:15660244-15660062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:16421980-16422161 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:18324234-18324052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:140
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:20856297-20856108 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:134
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:20913945-20913763 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:22254627-22254446 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:24540125-24540307 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:139
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):84, 94

               
               
               Conread position:464-647
               
               
               Cow position:chr2:25967728-25967552 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:129
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:26439192-26439011 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:131
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:27338254-27338068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:134
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):83, 161

               
               
               Conread position:464-647
               
               
               Cow position:chr2:31567651-31567833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:31900696-31900878 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:35981156-35980975 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:37072342-37072527 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:136
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):50, 98

               
               
               Conread position:464-647
               
               
               Cow position:chr2:39500512-39500693 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:142
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:39583928-39584110 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:39810508-39810690 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):69, 79

               
               
               Conread position:464-647
               
               
               Cow position:chr2:40254140-40254322 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:41022877-41022696 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:140
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):107, 90

               
               
               Conread position:464-647
               
               
               Cow position:chr2:42226737-42226555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:141
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):101, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:44170093-44170271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:45723360-45723542 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:46058799-46058617 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:46264868-46264686 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:46311986-46312166 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:142
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:46357381-46357563 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:130
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:54882696-54882878 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):69, 95

               
               
               Conread position:464-647
               
               
               Cow position:chr2:56737829-56737643 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):30, 94

               
               
               Conread position:464-647
               
               
               Cow position:chr2:62438913-62438729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:135
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):107, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:64197462-64197276 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):84, 100

               
               
               Conread position:464-647
               
               
               Cow position:chr2:64532879-64533057 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:133
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:67596465-67596284 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:140
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):95, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:70776038-70775851 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):47, 99

               
               
               Conread position:464-647
               
               
               Cow position:chr2:70908790-70908600 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:139
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:72758135-72758324 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:144
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):24, 42

               
               
               Conread position:464-647
               
               
               Cow position:chr2:74510539-74510357 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:138
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:76334915-76335103 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr2:78744234-78744416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:142
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):89, 106

               
               
               Conread position:464-648
               
               
               Cow position:chr2:1365361-1365178 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):87, 95

               
               
               Conread position:464-648
               
               
               Cow position:chr2:29297019-29296834 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):34, 96

               
               
               Conread position:464-648
               
               
               Cow position:chr2:34694769-34694954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:136
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):25, 51

               
               
               Conread position:464-648
               
               
               Cow position:chr2:39941029-39941209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:135
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-648
               
               
               Cow position:chr2:40790793-40790978 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):75, 107

               
               
               Conread position:464-648
               
               
               Cow position:chr2:41147408-41147592 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):85, 96

               
               
               Conread position:464-648
               
               
               Cow position:chr2:46995355-46995173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:134
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):39, 70

               
               
               Conread position:464-648
               
               
               Cow position:chr2:56355315-56355133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:465-647
               
               
               Cow position:chr2:42393968-42394148 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:133
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:466-645
               
               
               Cow position:chr2:64322548-64322732 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:137
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:466-647
               
               
               Cow position:chr2:50561803-50561990 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:133
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):24, 106

               
               
               Conread position:467-627
               
               
               Cow position:chr2:34646688-34646853 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:127
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:467-643
               
               
               Cow position:chr2:36423568-36423743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:136
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:467-645
               
               
               Cow position:chr2:86100417-86100589 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:129
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:467-646
               
               
               Cow position:chr2:52409737-52409558 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:467-646
               
               
               Cow position:chr2:63250854-63250676 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:128
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:467-647
               
               
               Cow position:chr2:2010876-2010697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:467-647
               
               
               Cow position:chr2:10640391-10640568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:130
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):175, 60

               
               
               Conread position:467-647
               
               
               Cow position:chr2:15808543-15808722 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:132
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:467-647
               
               
               Cow position:chr2:19502818-19502633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):77, 16

               
               
               Conread position:467-647
               
               
               Cow position:chr2:24148478-24148658 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):77, 107

               
               
               Conread position:467-647
               
               
               Cow position:chr2:38882908-38882728 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:137
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):76, 68

               
               
               Conread position:467-647
               
               
               Cow position:chr2:39385321-39385147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:467-647
               
               
               Cow position:chr2:42800587-42800765 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):19, 99

               
               
               Conread position:467-647
               
               
               Cow position:chr2:42871754-42871934 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):158, 90

               
               
               Conread position:467-647
               
               
               Cow position:chr2:48617507-48617693 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):72, 158

               
               
               Conread position:467-647
               
               
               Cow position:chr2:52776795-52776969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):85, 71

               
               
               Conread position:467-647
               
               
               Cow position:chr2:61681130-61681306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:129
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:467-647
               
               
               Cow position:chr2:67235691-67235871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):25, 92

               
               
               Conread position:467-647
               
               
               Cow position:chr2:73279467-73279282 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:133
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):65, 98

               
               
               Conread position:467-647
               
               
               Cow position:chr2:85091500-85091321 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:468-645
               
               
               Cow position:chr2:19871997-19872173 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:468-647
               
               
               Cow position:chr2:34574776-34574954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:132
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:468-647
               
               
               Cow position:chr2:44191017-44191199 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):145, 89

               
               
               Conread position:468-647
               
               
               Cow position:chr2:45710578-45710756 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:468-647
               
               
               Cow position:chr2:46194190-46194372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):76, 15

               
               
               Conread position:468-647
               
               
               Cow position:chr2:47147253-47147431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:126
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:468-647
               
               
               Cow position:chr2:50606045-50606229 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:132
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):81, 0

               
               
               Conread position:468-647
               
               
               Cow position:chr2:60470720-60470897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:468-647
               
               
               Cow position:chr2:82055598-82055418 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):101, 25

               
               
               Conread position:469-647
               
               
               Cow position:chr2:9040175-9040352 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:469-647
               
               
               Cow position:chr2:62273393-62273215 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:129
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):19, 89

               
               
               Conread position:470-647
               
               
               Cow position:chr2:25633949-25634126 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):101, 87

               
               
               Conread position:470-647
               
               
               Cow position:chr2:47467149-47467324 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:133
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):98, 0

               
               
               Conread position:470-647
               
               
               Cow position:chr2:71800551-71800376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:144
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:471-645
               
               
               Cow position:chr2:27066595-27066770 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):98, 168

               
               
               Conread position:471-646
               
               
               Cow position:chr2:62744754-62744580 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:471-647
               
               
               Cow position:chr2:28819905-28820079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:125
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:471-648
               
               
               Cow position:chr2:304819-304633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:472-642
               
               
               Cow position:chr2:70580176-70580001 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:128
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):67, 91

               
               
               Conread position:472-647
               
               
               Cow position:chr2:64522516-64522342 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:131
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:473-647
               
               
               Cow position:chr2:67746949-67747122 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:129
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:474-647
               
               
               Cow position:chr2:18614011-18613834 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):65, 32

               
               
               Conread position:474-647
               
               
               Cow position:chr2:40980259-40980085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:129
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:475-647
               
               
               Cow position:chr2:5901427-5901258 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:128
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:475-647
               
               
               Cow position:chr2:32490157-32489980 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:137
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):64, 89

               
               
               Conread position:475-647
               
               
               Cow position:chr2:52806768-52806935 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:476-647
               
               
               Cow position:chr2:37325729-37325899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):81, 0

               
               
               Conread position:478-647
               
               
               Cow position:chr2:14624413-14624586 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:133
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:478-647
               
               
               Cow position:chr2:59906768-59906602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:479-634
               
               
               Cow position:chr2:55660636-55660790 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:112
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:479-647
               
               
               Cow position:chr2:6697924-6697756 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):22, 76

               
               
               Conread position:479-648
               
               
               Cow position:chr2:36146535-36146367 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:118
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:479-648
               
               
               Cow position:chr2:46745436-46745603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:120
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):27, 0

               
               
               Conread position:480-647
               
               
               Cow position:chr2:25930024-25929854 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):68, 84

               
               
               Conread position:481-647
               
               
               Cow position:chr2:37749316-37749491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:129
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:483-618
               
               
               Cow position:chr2:55497009-55497143 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:101
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:483-635
               
               
               Cow position:chr2:29044177-29044328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:114
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:483-646
               
               
               Cow position:chr2:70674289-70674451 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:483-647
               
               
               Cow position:chr2:988242-988406 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):12, 77

               
               
               Conread position:483-647
               
               
               Cow position:chr2:2378523-2378360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:483-647
               
               
               Cow position:chr2:8707291-8707127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):11, 75

               
               
               Conread position:483-647
               
               
               Cow position:chr2:17680088-17680251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:126
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:483-647
               
               
               Cow position:chr2:28733126-28733290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:125
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):8, 75

               
               
               Conread position:483-647
               
               
               Cow position:chr2:41723199-41723362 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:122
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:483-647
               
               
               Cow position:chr2:42383956-42384119 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:128
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:483-647
               
               
               Cow position:chr2:43644178-43644340 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):95, 59

               
               
               Conread position:483-647
               
               
               Cow position:chr2:44681132-44680967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):16, 76

               
               
               Conread position:483-648
               
               
               Cow position:chr2:36963087-36963251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:126
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):88, 12

               
               
               Conread position:484-647
               
               
               Cow position:chr2:7524581-7524421 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:121
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:484-648
               
               
               Cow position:chr2:818134-818293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:125
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:484-648
               
               
               Cow position:chr2:40691033-40691203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:485-631
               
               
               Cow position:chr2:30909965-30910110 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:109
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:485-645
               
               
               Cow position:chr2:50789989-50790154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:485-647
               
               
               Cow position:chr2:1303504-1303663 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:488-647
               
               
               Cow position:chr2:22197750-22197908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:161
               
               
               Alignm identity:119
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):22, 6

               
               
               Conread position:488-647
               
               
               Cow position:chr2:29159188-29159344 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):75, 82

               
               
               Conread position:488-647
               
               
               Cow position:chr2:49910937-49911095 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:488-647
               
               
               Cow position:chr2:82270028-82270185 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:489-647
               
               
               Cow position:chr2:20349559-20349403 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:121
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:491-624
               
               
               Cow position:chr2:82696712-82696580 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:103
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:491-647
               
               
               Cow position:chr2:76561671-76561826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:126
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:493-646
               
               
               Cow position:chr2:10972460-10972612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:110
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:493-647
               
               
               Cow position:chr2:1080254-1080407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:118
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:493-647
               
               
               Cow position:chr2:38628478-38628631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:493-647
               
               
               Cow position:chr2:77967437-77967285 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:112
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:494-647
               
               
               Cow position:chr2:13369216-13369375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:122
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:494-647
               
               
               Cow position:chr2:49463530-49463682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:111
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:495-647
               
               
               Cow position:chr2:44986761-44986608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:112
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):115, 64

               
               
               Conread position:497-645
               
               
               Cow position:chr2:2761473-2761326 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:114
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:497-645
               
               
               Cow position:chr2:4745122-4745269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:114
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:497-647
               
               
               Cow position:chr2:25589550-25589401 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:112
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:497-647
               
               
               Cow position:chr2:26259933-26259784 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:113
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:497-647
               
               
               Cow position:chr2:35180963-35181112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):74, 61

               
               
               Conread position:497-647
               
               
               Cow position:chr2:47766496-47766347 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:497-647
               
               
               Cow position:chr2:59593186-59593037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:497-647
               
               
               Cow position:chr2:76358389-76358538 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:115
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:497-647
               
               
               Cow position:chr2:86497257-86497404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:113
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:498-647
               
               
               Cow position:chr2:577362-577513 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:112
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:499-647
               
               
               Cow position:chr2:9767856-9767709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:109
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:499-647
               
               
               Cow position:chr2:20900901-20900754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:114
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:499-647
               
               
               Cow position:chr2:33988802-33988656 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:499-647
               
               
               Cow position:chr2:36076918-36077063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:110
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:499-647
               
               
               Cow position:chr2:44081016-44081164 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:116
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):40, 61

               
               
               Conread position:499-647
               
               
               Cow position:chr2:65801193-65801340 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:113
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:499-648
               
               
               Cow position:chr2:4416514-4416367 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:113
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:499-648
               
               
               Cow position:chr2:69676967-69676819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:110
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:500-647
               
               
               Cow position:chr2:31355276-31355422 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:117
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:500-647
               
               
               Cow position:chr2:41176289-41176434 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:109
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:500-647
               
               
               Cow position:chr2:58564697-58564545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:117
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:501-647
               
               
               Cow position:chr2:15598154-15598002 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:119
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):38, 70

               
               
               Conread position:502-647
               
               
               Cow position:chr2:40879660-40879804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:109
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):56, 0

               
               
               Conread position:502-647
               
               
               Cow position:chr2:74468372-74468228 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:108
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:502-647
               
               
               Cow position:chr2:75638238-75638094 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:109
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:503-647
               
               
               Cow position:chr2:48895861-48896004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:108
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:503-648
               
               
               Cow position:chr2:85042422-85042566 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:146
               
               
               Alignm identity:107
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:504-645
               
               
               Cow position:chr2:28711401-28711264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:109
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:506-646
               
               
               Cow position:chr2:53032496-53032634 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:109
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):46, 54

               
               
               Conread position:506-647
               
               
               Cow position:chr2:840735-840874 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:109
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):36, 0

               
               
               Conread position:506-647
               
               
               Cow position:chr2:13693973-13693833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:108
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:506-647
               
               
               Cow position:chr2:23557998-23557858 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:104
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:506-647
               
               
               Cow position:chr2:37556970-37557110 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:104
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:506-647
               
               
               Cow position:chr2:61516052-61515912 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:506-648
               
               
               Cow position:chr2:22162-22023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:107
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:506-648
               
               
               Cow position:chr2:25254618-25254759 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:506-648
               
               
               Cow position:chr2:69672419-69672560 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:507-647
               
               
               Cow position:chr2:306270-306131 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:110
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:507-647
               
               
               Cow position:chr2:66962370-66962231 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:106
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:511-647
               
               
               Cow position:chr2:40456323-40456187 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:105
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):5, 47

               
               
               Conread position:512-647
               
               
               Cow position:chr2:31620416-31620282 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:101
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:513-647
               
               
               Cow position:chr2:23794189-23794056 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:102
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):44, 0

               
               
               Conread position:514-647
               
               
               Cow position:chr2:12287744-12287876 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:101
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):43, 0

               
               
               Conread position:515-647
               
               
               Cow position:chr2:22198706-22198837 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:100
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:515-647
               
               
               Cow position:chr2:43121983-43122113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:133
               
               
               Alignm identity:101
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:516-647
               
               
               Cow position:chr2:14312140-14312269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:100
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:516-647
               
               
               Cow position:chr2:29106104-29105974 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:132
               
               
               Alignm identity:100
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:519-647
               
               
               Cow position:chr2:58821835-58821708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:98
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:541-647
               
               
               Cow position:chr2:45259466-45259361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:107
               
               
               Alignm identity:87
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:559-647
               
               
               Cow position:chr2:46294407-46294319 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:89
               
               
               Alignm identity:77
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0
Show alignments to all cow chromosomes.