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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8030F10.5
        

               
Conread position:
               
226-647
               

               
Cow position:
               
chr22:8100038-8099619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 46
               

               
Conread position:
               
257-406
               

               
Cow position:
               
chr22:11037235-11037381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
257-461
               

               
Cow position:
               
chr22:14845232-14845022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
257-467
               

               
Cow position:
               
chr22:11806089-11805882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
85, 22
               

               
Conread position:
               
257-472
               

               
Cow position:
               
chr22:43238541-43238326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
257-473
               

               
Cow position:
               
chr22:50749-50969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 187
               

               
Conread position:
               
257-546
               

               
Cow position:
               
chr22:12728137-12727834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
257-581
               

               
Cow position:
               
chr22:11922525-11922206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 71
               

               
Conread position:
               
257-635
               

               
Cow position:
               
chr22:11698114-11697718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
257-645
               

               
Cow position:
               
chr22:31700807-31700402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
84, 152
               

               
Conread position:
               
257-646
               

               
Cow position:
               
chr22:17853603-17853206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 145
               

               
Conread position:
               
257-646
               

               
Cow position:
               
chr22:32210142-32210535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 161
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:102452-102857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:556802-556402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 106
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:8773475-8773072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 184
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:11746582-11746193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:21592953-21593343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 123
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:22967539-22967939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 103
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:26338835-26339232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:28144584-28144173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 185
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:28785641-28786045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:28996779-28996375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:33587260-33587670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 192
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:39902911-39903316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 187
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:41961577-41961169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:43261393-43261800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
257-647
               

               
Cow position:
               
chr22:44365680-44365275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 316
               

               
Conread position:
               
257-648
               

               
Cow position:
               
chr22:14893970-14894381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 135
               

               
Conread position:
               
258-436
               

               
Cow position:
               
chr22:42777187-42777369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
84, 110
               

               
Conread position:
               
258-635
               

               
Cow position:
               
chr22:23936257-23936650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 328
               

               
Conread position:
               
258-645
               

               
Cow position:
               
chr22:46439796-46439394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
258-648
               

               
Cow position:
               
chr22:1625323-1625727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 123
               

               
Conread position:
               
259-648
               

               
Cow position:
               
chr22:13272125-13272520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 127
               

               
Conread position:
               
269-437
               

               
Cow position:
               
chr22:31884469-31884308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
269-437
               

               
Cow position:
               
chr22:35934428-35934254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
269-613
               

               
Cow position:
               
chr22:8839920-8840277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 171
               

               
Conread position:
               
269-641
               

               
Cow position:
               
chr22:13735937-13735554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 178
               

               
Conread position:
               
269-642
               

               
Cow position:
               
chr22:30573811-30573422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 148
               

               
Conread position:
               
269-642
               

               
Cow position:
               
chr22:41928038-41927650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
269-646
               

               
Cow position:
               
chr22:11489881-11490276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
73, 126
               

               
Conread position:
               
269-646
               

               
Cow position:
               
chr22:25743644-25743256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 123
               

               
Conread position:
               
269-647
               

               
Cow position:
               
chr22:6498200-6497826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 175
               

               
Conread position:
               
269-647
               

               
Cow position:
               
chr22:14817099-14816709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 176
               

               
Conread position:
               
269-647
               

               
Cow position:
               
chr22:33448765-33448375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 176
               

               
Conread position:
               
269-647
               

               
Cow position:
               
chr22:42499824-42499435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
270-386
               

               
Cow position:
               
chr22:36503165-36503047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
270-388
               

               
Cow position:
               
chr22:43744288-43744165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
270-471
               

               
Cow position:
               
chr22:18192061-18192266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
74, 176
               

               
Conread position:
               
270-473
               

               
Cow position:
               
chr22:10161274-10161482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 175
               

               
Conread position:
               
270-589
               

               
Cow position:
               
chr22:11385914-11386245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
270-610
               

               
Cow position:
               
chr22:47698803-47698456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
205, 71
               

               
Conread position:
               
270-624
               

               
Cow position:
               
chr22:40386464-40386828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 292
               

               
Conread position:
               
270-627
               

               
Cow position:
               
chr22:30364378-30364755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 175
               

               
Conread position:
               
270-635
               

               
Cow position:
               
chr22:45354687-45355073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
270-642
               

               
Cow position:
               
chr22:21364071-21363683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 173
               

               
Conread position:
               
270-644
               

               
Cow position:
               
chr22:32304335-32304715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
74, 118
               

               
Conread position:
               
270-645
               

               
Cow position:
               
chr22:865188-864811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 175
               

               
Conread position:
               
270-646
               

               
Cow position:
               
chr22:30176251-30176628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
96, 52
               

               
Conread position:
               
270-646
               

               
Cow position:
               
chr22:31870929-31870541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 166
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:540678-541070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:1342070-1342453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:3011637-3011250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 104
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:4138787-4138395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:11212272-11211882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:13326439-13326052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 278
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:25912255-25912642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:31331329-31330940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:32710070-32709678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:35909943-35909551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 175
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:39473054-39472665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 174
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:41365265-41365641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 167
               

               
Conread position:
               
270-647
               

               
Cow position:
               
chr22:45358193-45357824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
270-648
               

               
Cow position:
               
chr22:26167257-26166862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 174
               

               
Conread position:
               
270-648
               

               
Cow position:
               
chr22:41353758-41353364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
271-390
               

               
Cow position:
               
chr22:38553760-38553884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
271-594
               

               
Cow position:
               
chr22:8505226-8505551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
71, 115
               

               
Conread position:
               
271-618
               

               
Cow position:
               
chr22:23006744-23006379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
271-634
               

               
Cow position:
               
chr22:47905892-47906274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
271-642
               

               
Cow position:
               
chr22:4323545-4323935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
73, 172
               

               
Conread position:
               
271-645
               

               
Cow position:
               
chr22:45106586-45106210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 297
               

               
Conread position:
               
271-647
               

               
Cow position:
               
chr22:8480981-8481359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 115
               

               
Conread position:
               
271-647
               

               
Cow position:
               
chr22:34605713-34606102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 152
               

               
Conread position:
               
271-647
               

               
Cow position:
               
chr22:36208242-36208639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 173
               

               
Conread position:
               
271-648
               

               
Cow position:
               
chr22:32358713-32358326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 116
               

               
Conread position:
               
272-365
               

               
Cow position:
               
chr22:13696381-13696286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
272-370
               

               
Cow position:
               
chr22:11767295-11767192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
272-373
               

               
Cow position:
               
chr22:15049460-15049566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
272-379
               

               
Cow position:
               
chr22:21567013-21567124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
272-380
               

               
Cow position:
               
chr22:15057820-15057933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
272-380
               

               
Cow position:
               
chr22:15060338-15060224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
272-386
               

               
Cow position:
               
chr22:15920300-15920181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
272-391
               

               
Cow position:
               
chr22:40121951-40121827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
272-439
               

               
Cow position:
               
chr22:15858324-15858499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
272-456
               

               
Cow position:
               
chr22:13293188-13293000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
68, 172
               

               
Conread position:
               
272-456
               

               
Cow position:
               
chr22:27321423-27321609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
272-465
               

               
Cow position:
               
chr22:20087908-20088104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
272-465
               

               
Cow position:
               
chr22:45845435-45845632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-467
               

               
Cow position:
               
chr22:322283-322088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
272-467
               

               
Cow position:
               
chr22:11260179-11259981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
272-467
               

               
Cow position:
               
chr22:11305432-11305631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 45
               

               
Conread position:
               
272-467
               

               
Cow position:
               
chr22:44462843-44463041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 108
               

               
Conread position:
               
272-470
               

               
Cow position:
               
chr22:2415436-2415634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
272-470
               

               
Cow position:
               
chr22:31513983-31513782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 132
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr22:3433418-3433214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr22:15918369-15918169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 85
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr22:19739274-19739074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 18
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr22:24906079-24906289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr22:27386011-27385807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-472
               

               
Cow position:
               
chr22:46568577-46568373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 174
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr22:697477-697682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr22:6123573-6123370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr22:11988174-11987971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr22:14825086-14825291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr22:23864353-23864558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr22:27513712-27513917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
66, 171
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr22:34610684-34610889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
70, 159
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr22:42683772-42683979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr22:45281486-45281691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-484
               

               
Cow position:
               
chr22:19822736-19822947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
272-498
               

               
Cow position:
               
chr22:35755148-35754921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 116
               

               
Conread position:
               
272-513
               

               
Cow position:
               
chr22:27508141-27508394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 101
               

               
Conread position:
               
272-530
               

               
Cow position:
               
chr22:48271478-48271210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 96
               

               
Conread position:
               
272-531
               

               
Cow position:
               
chr22:13897177-13897452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
272-531
               

               
Cow position:
               
chr22:14509982-14509706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
272-531
               

               
Cow position:
               
chr22:22607703-22607978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-537
               

               
Cow position:
               
chr22:16103849-16104123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 48
               

               
Conread position:
               
272-537
               

               
Cow position:
               
chr22:17834281-17834002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
272-546
               

               
Cow position:
               
chr22:3324895-3325181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
272-556
               

               
Cow position:
               
chr22:13081147-13080854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
70, 126
               

               
Conread position:
               
272-560
               

               
Cow position:
               
chr22:28130281-28130586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
272-561
               

               
Cow position:
               
chr22:36571993-36571700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
166, 70
               

               
Conread position:
               
272-575
               

               
Cow position:
               
chr22:5624098-5623776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
70, 170
               

               
Conread position:
               
272-582
               

               
Cow position:
               
chr22:36632172-36632487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-584
               

               
Cow position:
               
chr22:13243047-13242720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-591
               

               
Cow position:
               
chr22:12682447-12682125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
272-601
               

               
Cow position:
               
chr22:799410-799755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr22:5331234-5330906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
127, 47
               

               
Conread position:
               
272-608
               

               
Cow position:
               
chr22:33387079-33386722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
39, 173
               

               
Conread position:
               
272-611
               

               
Cow position:
               
chr22:28712869-28712515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-611
               

               
Cow position:
               
chr22:38439831-38439477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 301
               

               
Conread position:
               
272-613
               

               
Cow position:
               
chr22:24067048-24066690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
272-616
               

               
Cow position:
               
chr22:42994934-42995293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-617
               

               
Cow position:
               
chr22:981867-982228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-618
               

               
Cow position:
               
chr22:3488791-3488430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 173
               

               
Conread position:
               
272-619
               

               
Cow position:
               
chr22:8328895-8329243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 70
               

               
Conread position:
               
272-621
               

               
Cow position:
               
chr22:36254434-36254795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 121
               

               
Conread position:
               
272-624
               

               
Cow position:
               
chr22:1036410-1036777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
272-625
               

               
Cow position:
               
chr22:1521930-1521563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-625
               

               
Cow position:
               
chr22:37381812-37382173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
129, 70
               

               
Conread position:
               
272-626
               

               
Cow position:
               
chr22:19168968-19169335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-627
               

               
Cow position:
               
chr22:32894452-32894814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 165
               

               
Conread position:
               
272-631
               

               
Cow position:
               
chr22:37323808-37324175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 156
               

               
Conread position:
               
272-632
               

               
Cow position:
               
chr22:10302329-10302707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 119
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr22:14005478-14005850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 91
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr22:25240987-25240613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 178
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr22:25336696-25337075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr22:30675192-30674816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-635
               

               
Cow position:
               
chr22:33378998-33378620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-642
               

               
Cow position:
               
chr22:18233413-18233797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 123
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr22:1325757-1326129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr22:6286187-6285799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 181
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr22:8733987-8733610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr22:9269744-9270132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr22:10906665-10906273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 176
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr22:22154931-22155310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 65
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr22:29553629-29553241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-645
               

               
Cow position:
               
chr22:31316084-31316472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:1484187-1484572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:6622925-6622535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:6755628-6755237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 176
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:6756990-6756598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 176
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:9685350-9685730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:10602718-10603103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 145
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:12387685-12388061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:15013148-15012758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:23618963-23618576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
196, 70
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:32892029-32892410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 70
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:33200816-33201205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 173
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:34597267-34597642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
272-646
               

               
Cow position:
               
chr22:39695638-39696021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 59
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:1266613-1266228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:1280062-1279675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 145
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:1591578-1591965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:2560929-2560539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 64
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:3274812-3274424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:3807218-3807623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 152
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:3808611-3809001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:3941602-3941993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:4645114-4645488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 72
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:4930798-4930408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:5041655-5042039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:5262986-5262601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:5312762-5313152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:5640682-5640292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:5929363-5928970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
70, 331
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:5930788-5930397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:6924577-6924956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 123
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:6928773-6929161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 120
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:7303947-7303560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:7435934-7436321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:8299694-8300085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:8776173-8775786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 298
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:9285197-9284807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:10550411-10550810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 181
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:10578292-10578683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:10650330-10649945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:11127631-11128022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:11231753-11231363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:11643386-11642998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:11754108-11753720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 171
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:11837877-11837490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 107
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:12225362-12224973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 107
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:13017462-13017070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:13552901-13553288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 121
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:13688792-13688401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 174
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:13859732-13860115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 179
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:14807799-14808189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:15173883-15174271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 191
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:15308417-15308027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:15869224-15869601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 70
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:16203341-16203726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 121
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:19140161-19139773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 53
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:19597417-19597033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 71
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:19600256-19599869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:19712844-19712465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 113
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:19828651-19828267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 123
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:20237029-20236639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:20569497-20569107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:21192669-21192281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:22048656-22048266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:22107587-22107974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:22278634-22279024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:22563214-22563604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:25432115-25432502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 151
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:25456577-25456967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:25659211-25658824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:27243279-27243669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:27306419-27306041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:27790754-27791146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
70, 53
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:28127541-28127151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:29397625-29398015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:29464431-29464817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 243
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:29855395-29855782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:30483240-30483626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:30870631-30870250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 116
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:30963435-30963816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 170
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:31375511-31375902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 173
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:32220986-32221373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 76
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:32660851-32661227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 168
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:32811667-32811278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:32943993-32944383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:33093882-33094272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:33901754-33901364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 91
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:33951416-33951026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:34171995-34172385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:36193194-36193571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:36357735-36358125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:36858030-36857642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:37290309-37289922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:37535782-37535392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 302
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:40828522-40828132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:41271666-41271279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:41686303-41685922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
57, 101
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:41846024-41845637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:42234315-42234691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:42604953-42605345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:42923538-42923148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:43041203-43040812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:43279938-43279547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 173
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:44099523-44099133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:46566430-46566040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-647
               

               
Cow position:
               
chr22:46583114-46582724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr22:2070290-2070683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 173
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr22:6493421-6493810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr22:7302529-7302133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 172
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr22:9371866-9372250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr22:12893277-12892889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr22:14535988-14535600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 116
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr22:26759507-26759882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
70, 174
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr22:29501298-29501683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr22:35903387-35903008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 73
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr22:39464996-39464604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 173
               

               
Conread position:
               
272-648
               

               
Cow position:
               
chr22:43949313-43948923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
273-468
               

               
Cow position:
               
chr22:22322758-22322954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
273-473
               

               
Cow position:
               
chr22:31645645-31645843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
273-552
               

               
Cow position:
               
chr22:31593719-31593426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
69, 107
               

               
Conread position:
               
273-633
               

               
Cow position:
               
chr22:23951334-23950965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 69
               

               
Conread position:
               
273-638
               

               
Cow position:
               
chr22:3270286-3269919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 172
               

               
Conread position:
               
273-642
               

               
Cow position:
               
chr22:6340194-6340576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
273-646
               

               
Cow position:
               
chr22:36594664-36594276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 177
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr22:6721744-6721353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr22:18021694-18021307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 170
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr22:18030769-18031158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 301
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr22:29062660-29063046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 75
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr22:32951777-32952178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr22:36555602-36555217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr22:37829772-37829399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 171
               

               
Conread position:
               
273-647
               

               
Cow position:
               
chr22:46611508-46611117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 173
               

               
Conread position:
               
274-399
               

               
Cow position:
               
chr22:4061717-4061587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
274-473
               

               
Cow position:
               
chr22:14092426-14092220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
68, 173
               

               
Conread position:
               
274-530
               

               
Cow position:
               
chr22:8744177-8743908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
274-602
               

               
Cow position:
               
chr22:30918614-30918954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 170
               

               
Conread position:
               
274-647
               

               
Cow position:
               
chr22:15067735-15068119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 170
               

               
Conread position:
               
274-647
               

               
Cow position:
               
chr22:22045296-22045689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
274-647
               

               
Cow position:
               
chr22:40373932-40374317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
274-647
               

               
Cow position:
               
chr22:40376105-40376500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 170
               

               
Conread position:
               
275-388
               

               
Cow position:
               
chr22:36540689-36540571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
275-473
               

               
Cow position:
               
chr22:25341006-25341207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
67, 137
               

               
Conread position:
               
275-531
               

               
Cow position:
               
chr22:37088703-37088445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
61, 154
               

               
Conread position:
               
275-621
               

               
Cow position:
               
chr22:645394-645050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 52
               

               
Conread position:
               
275-647
               

               
Cow position:
               
chr22:26658324-26658720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 307
               

               
Conread position:
               
275-647
               

               
Cow position:
               
chr22:30514578-30514966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 300
               

               
Conread position:
               
275-647
               

               
Cow position:
               
chr22:43788813-43788419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
275-647
               

               
Cow position:
               
chr22:47462905-47463282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 215
               

               
Conread position:
               
277-437
               

               
Cow position:
               
chr22:44740388-44740549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
277-457
               

               
Cow position:
               
chr22:17813299-17813482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 149
               

               
Conread position:
               
277-472
               

               
Cow position:
               
chr22:34617973-34618174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
10, 169
               

               
Conread position:
               
277-632
               

               
Cow position:
               
chr22:32019018-32018636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
277-646
               

               
Cow position:
               
chr22:13249386-13249774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 111
               

               
Conread position:
               
277-647
               

               
Cow position:
               
chr22:1874066-1874433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 65
               

               
Conread position:
               
277-647
               

               
Cow position:
               
chr22:4076548-4076187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 60
               

               
Conread position:
               
277-647
               

               
Cow position:
               
chr22:25206641-25206258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 123
               

               
Conread position:
               
277-647
               

               
Cow position:
               
chr22:34665381-34665763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 164
               

               
Conread position:
               
277-648
               

               
Cow position:
               
chr22:13768819-13769199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
278-473
               

               
Cow position:
               
chr22:10361474-10361666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 109
               

               
Conread position:
               
278-645
               

               
Cow position:
               
chr22:46627045-46626659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
278-647
               

               
Cow position:
               
chr22:9465864-9466249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
278-647
               

               
Cow position:
               
chr22:38107029-38107410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 89
               

               
Conread position:
               
279-508
               

               
Cow position:
               
chr22:8064059-8063822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
279-566
               

               
Cow position:
               
chr22:10330693-10330976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 145
               

               
Conread position:
               
279-636
               

               
Cow position:
               
chr22:13721209-13720832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 58
               

               
Conread position:
               
279-640
               

               
Cow position:
               
chr22:40297451-40297098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
279-641
               

               
Cow position:
               
chr22:6611011-6610644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
279-642
               

               
Cow position:
               
chr22:26184839-26184454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 100
               

               
Conread position:
               
279-647
               

               
Cow position:
               
chr22:5015629-5016015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 167
               

               
Conread position:
               
279-647
               

               
Cow position:
               
chr22:12569970-12569563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr22:16915795-16915418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 165
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr22:32650843-32651221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 151
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr22:38549136-38549511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
57, 127
               

               
Conread position:
               
280-472
               

               
Cow position:
               
chr22:12572587-12572789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 170
               

               
Conread position:
               
280-642
               

               
Cow position:
               
chr22:1310389-1310021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
280-646
               

               
Cow position:
               
chr22:27171923-27171545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 269
               

               
Conread position:
               
280-647
               

               
Cow position:
               
chr22:17324948-17324568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
280-647
               

               
Cow position:
               
chr22:21414965-21415344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 176
               

               
Conread position:
               
281-555
               

               
Cow position:
               
chr22:35667926-35667644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
281-590
               

               
Cow position:
               
chr22:12968702-12968384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
61, 290
               

               
Conread position:
               
281-622
               

               
Cow position:
               
chr22:23830266-23830618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
281-643
               

               
Cow position:
               
chr22:15952105-15951739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 62
               

               
Conread position:
               
281-646
               

               
Cow position:
               
chr22:23807209-23806837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
281-646
               

               
Cow position:
               
chr22:36439980-36439600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 163
               

               
Conread position:
               
281-647
               

               
Cow position:
               
chr22:10596083-10596464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 163
               

               
Conread position:
               
281-647
               

               
Cow position:
               
chr22:18600463-18600083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 163
               

               
Conread position:
               
281-647
               

               
Cow position:
               
chr22:18807680-18807311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 59
               

               
Conread position:
               
281-647
               

               
Cow position:
               
chr22:23805646-23805270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
281-647
               

               
Cow position:
               
chr22:37032076-37031695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 163
               

               
Conread position:
               
281-647
               

               
Cow position:
               
chr22:41240581-41240961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 163
               

               
Conread position:
               
281-647
               

               
Cow position:
               
chr22:41477089-41476710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
281-647
               

               
Cow position:
               
chr22:44496435-44496807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 50
               

               
Conread position:
               
283-473
               

               
Cow position:
               
chr22:34608027-34608216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
283-618
               

               
Cow position:
               
chr22:22862213-22861867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
283-623
               

               
Cow position:
               
chr22:31632938-31632586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 104
               

               
Conread position:
               
283-636
               

               
Cow position:
               
chr22:26019145-26018781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 129
               

               
Conread position:
               
283-644
               

               
Cow position:
               
chr22:41980956-41980581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 265
               

               
Conread position:
               
283-647
               

               
Cow position:
               
chr22:1997717-1998101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
283-647
               

               
Cow position:
               
chr22:8417806-8418179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
283-648
               

               
Cow position:
               
chr22:1080715-1081099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 43
               

               
Conread position:
               
285-395
               

               
Cow position:
               
chr22:34711901-34712015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
286-391
               

               
Cow position:
               
chr22:25691640-25691530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
286-444
               

               
Cow position:
               
chr22:13609900-13609737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
286-472
               

               
Cow position:
               
chr22:36188601-36188787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 104
               

               
Conread position:
               
286-529
               

               
Cow position:
               
chr22:19225264-19225512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
286-554
               

               
Cow position:
               
chr22:43044926-43044646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
286-634
               

               
Cow position:
               
chr22:2389712-2389352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
286-645
               

               
Cow position:
               
chr22:29955666-29955288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
286-646
               

               
Cow position:
               
chr22:5281841-5282218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 161
               

               
Conread position:
               
286-646
               

               
Cow position:
               
chr22:9370440-9370813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 152
               

               
Conread position:
               
286-646
               

               
Cow position:
               
chr22:11969778-11969400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
286-647
               

               
Cow position:
               
chr22:12624990-12624615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 125
               

               
Conread position:
               
286-647
               

               
Cow position:
               
chr22:18811355-18810991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 54
               

               
Conread position:
               
286-647
               

               
Cow position:
               
chr22:23582260-23581872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 165
               

               
Conread position:
               
286-647
               

               
Cow position:
               
chr22:29623976-29624352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 158
               

               
Conread position:
               
286-647
               

               
Cow position:
               
chr22:36575489-36575113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 162
               

               
Conread position:
               
286-648
               

               
Cow position:
               
chr22:19656300-19655922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
287-464
               

               
Cow position:
               
chr22:28178728-28178907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 80
               

               
Conread position:
               
287-625
               

               
Cow position:
               
chr22:93018-92666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
287-632
               

               
Cow position:
               
chr22:33332149-33332504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
287-647
               

               
Cow position:
               
chr22:41387949-41388330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
54, 160
               

               
Conread position:
               
288-473
               

               
Cow position:
               
chr22:34822929-34823119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 156
               

               
Conread position:
               
288-561
               

               
Cow position:
               
chr22:14639080-14638792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
288-599
               

               
Cow position:
               
chr22:27223337-27223005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 156
               

               
Conread position:
               
288-646
               

               
Cow position:
               
chr22:22022225-22022600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 48
               

               
Conread position:
               
288-647
               

               
Cow position:
               
chr22:5338260-5337887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
288-647
               

               
Cow position:
               
chr22:25942820-25943192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 78
               

               
Conread position:
               
288-647
               

               
Cow position:
               
chr22:46528043-46528427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 140
               

               
Conread position:
               
288-648
               

               
Cow position:
               
chr22:46016210-46016582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
289-646
               

               
Cow position:
               
chr22:4984923-4984552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
290-473
               

               
Cow position:
               
chr22:23856016-23856203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
290-615
               

               
Cow position:
               
chr22:34749931-34750269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 263
               

               
Conread position:
               
290-647
               

               
Cow position:
               
chr22:4537566-4537938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 154
               

               
Conread position:
               
290-647
               

               
Cow position:
               
chr22:18487940-18487562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 157
               

               
Conread position:
               
291-647
               

               
Cow position:
               
chr22:10920512-10920150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 21
               

               
Conread position:
               
292-416
               

               
Cow position:
               
chr22:8876597-8876726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
292-467
               

               
Cow position:
               
chr22:9277347-9277533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
48, 159
               

               
Conread position:
               
292-647
               

               
Cow position:
               
chr22:23803338-23802972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 49
               

               
Conread position:
               
292-647
               

               
Cow position:
               
chr22:29575503-29575140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 38
               

               
Conread position:
               
292-647
               

               
Cow position:
               
chr22:32481120-32480754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 149
               

               
Conread position:
               
292-647
               

               
Cow position:
               
chr22:40720938-40720576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
293-647
               

               
Cow position:
               
chr22:5364402-5364027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
293-647
               

               
Cow position:
               
chr22:26081561-26081191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 261
               

               
Conread position:
               
294-444
               

               
Cow position:
               
chr22:32698189-32698344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
295-647
               

               
Cow position:
               
chr22:17993696-17993319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
49, 285
               

               
Conread position:
               
296-640
               

               
Cow position:
               
chr22:39516552-39516887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
118, 42
               

               
Conread position:
               
296-648
               

               
Cow position:
               
chr22:42934151-42933776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
297-647
               

               
Cow position:
               
chr22:5315794-5316157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 144
               

               
Conread position:
               
297-647
               

               
Cow position:
               
chr22:21502081-21502447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 149
               

               
Conread position:
               
297-647
               

               
Cow position:
               
chr22:39901365-39901010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 89
               

               
Conread position:
               
298-528
               

               
Cow position:
               
chr22:22145511-22145761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
298-647
               

               
Cow position:
               
chr22:3283598-3283249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
298-647
               

               
Cow position:
               
chr22:27285006-27285370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 147
               

               
Conread position:
               
298-647
               

               
Cow position:
               
chr22:46666137-46665776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 102
               

               
Conread position:
               
299-469
               

               
Cow position:
               
chr22:39451909-39452083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 145
               

               
Conread position:
               
299-592
               

               
Cow position:
               
chr22:23759637-23759327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 145
               

               
Conread position:
               
299-647
               

               
Cow position:
               
chr22:26321778-26322155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
45, 147
               

               
Conread position:
               
300-647
               

               
Cow position:
               
chr22:2624201-2623834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 146
               

               
Conread position:
               
300-647
               

               
Cow position:
               
chr22:34442297-34441935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 144
               

               
Conread position:
               
301-645
               

               
Cow position:
               
chr22:8283331-8283692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 145
               

               
Conread position:
               
302-635
               

               
Cow position:
               
chr22:39444717-39445063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
304-471
               

               
Cow position:
               
chr22:18195586-18195764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
304-645
               

               
Cow position:
               
chr22:35534024-35533668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
304-646
               

               
Cow position:
               
chr22:6567280-6566922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 139
               

               
Conread position:
               
305-536
               

               
Cow position:
               
chr22:2850236-2850017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
305-647
               

               
Cow position:
               
chr22:7280334-7280696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
305-647
               

               
Cow position:
               
chr22:34399081-34398744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
37, 141
               

               
Conread position:
               
305-647
               

               
Cow position:
               
chr22:34931397-34931042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
306-647
               

               
Cow position:
               
chr22:36587593-36587236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 139
               

               
Conread position:
               
306-647
               

               
Cow position:
               
chr22:40590252-40590605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 139
               

               
Conread position:
               
306-648
               

               
Cow position:
               
chr22:14925377-14925006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 138
               

               
Conread position:
               
307-473
               

               
Cow position:
               
chr22:17937172-17937002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 139
               

               
Conread position:
               
307-524
               

               
Cow position:
               
chr22:8766765-8766976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
307-647
               

               
Cow position:
               
chr22:299382-299737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
307-647
               

               
Cow position:
               
chr22:27337586-27337230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
308-537
               

               
Cow position:
               
chr22:14843469-14843718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
308-584
               

               
Cow position:
               
chr22:4372354-4372641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 207
               

               
Conread position:
               
308-646
               

               
Cow position:
               
chr22:44515368-44515017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 136
               

               
Conread position:
               
308-647
               

               
Cow position:
               
chr22:8643960-8644311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
308-647
               

               
Cow position:
               
chr22:11366015-11365685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
308-647
               

               
Cow position:
               
chr22:36564249-36563895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
309-437
               

               
Cow position:
               
chr22:34725849-34725977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
30, 34
               

               
Conread position:
               
309-647
               

               
Cow position:
               
chr22:898124-898469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 133
               

               
Conread position:
               
310-646
               

               
Cow position:
               
chr22:47866961-47867307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
310-647
               

               
Cow position:
               
chr22:30712109-30712460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 134
               

               
Conread position:
               
311-647
               

               
Cow position:
               
chr22:994687-995038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
311-647
               

               
Cow position:
               
chr22:5368644-5368995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 134
               

               
Conread position:
               
311-648
               

               
Cow position:
               
chr22:13209959-13210315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
312-606
               

               
Cow position:
               
chr22:7156376-7156684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 132
               

               
Conread position:
               
312-647
               

               
Cow position:
               
chr22:21355790-21355450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 101
               

               
Conread position:
               
312-647
               

               
Cow position:
               
chr22:33196685-33196335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 133
               

               
Conread position:
               
312-647
               

               
Cow position:
               
chr22:36583265-36582918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 138
               

               
Conread position:
               
314-645
               

               
Cow position:
               
chr22:47525064-47525421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
314-647
               

               
Cow position:
               
chr22:23205787-23205445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 27
               

               
Conread position:
               
316-647
               

               
Cow position:
               
chr22:35639763-35640109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 129
               

               
Conread position:
               
317-645
               

               
Cow position:
               
chr22:10314471-10314801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
27, 126
               

               
Conread position:
               
319-615
               

               
Cow position:
               
chr22:58776-59087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 123
               

               
Conread position:
               
319-635
               

               
Cow position:
               
chr22:26088659-26088328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 126
               

               
Conread position:
               
319-645
               

               
Cow position:
               
chr22:42682233-42681895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 122
               

               
Conread position:
               
319-647
               

               
Cow position:
               
chr22:3251620-3251275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
319-647
               

               
Cow position:
               
chr22:17003616-17003276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 13
               

               
Conread position:
               
319-647
               

               
Cow position:
               
chr22:22135580-22135923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 133
               

               
Conread position:
               
320-647
               

               
Cow position:
               
chr22:6623471-6623813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 125
               

               
Conread position:
               
320-647
               

               
Cow position:
               
chr22:34902381-34902719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 21
               

               
Conread position:
               
321-536
               

               
Cow position:
               
chr22:17073191-17073415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
145, 17
               

               
Conread position:
               
322-536
               

               
Cow position:
               
chr22:18121602-18121374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 121
               

               
Conread position:
               
323-504
               

               
Cow position:
               
chr22:31307431-31307618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
327-647
               

               
Cow position:
               
chr22:22160093-22160432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 116
               

               
Conread position:
               
327-647
               

               
Cow position:
               
chr22:36546753-36546424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 113
               

               
Conread position:
               
338-472
               

               
Cow position:
               
chr22:44834838-44834971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
339-648
               

               
Cow position:
               
chr22:15049552-15049879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
11, 105
               

               
Conread position:
               
340-625
               

               
Cow position:
               
chr22:39601887-39602176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
340-642
               

               
Cow position:
               
chr22:11600201-11600501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
340-647
               

               
Cow position:
               
chr22:15039773-15039474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 54
               

               
Conread position:
               
341-473
               

               
Cow position:
               
chr22:1835487-1835618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
341-473
               

               
Cow position:
               
chr22:13677840-13677971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
341-591
               

               
Cow position:
               
chr22:11137802-11137541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
79, 100
               

               
Conread position:
               
341-624
               

               
Cow position:
               
chr22:7101977-7102276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
96, 249
               

               
Conread position:
               
341-646
               

               
Cow position:
               
chr22:37137282-37137597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
341-647
               

               
Cow position:
               
chr22:3837842-3837530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
130, 28
               

               
Conread position:
               
341-647
               

               
Cow position:
               
chr22:10984824-10985138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
341-647
               

               
Cow position:
               
chr22:15729509-15729825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 99
               

               
Conread position:
               
341-647
               

               
Cow position:
               
chr22:21331050-21330735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 99
               

               
Conread position:
               
341-648
               

               
Cow position:
               
chr22:43557524-43557210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 99
               

               
Conread position:
               
342-635
               

               
Cow position:
               
chr22:28730927-28731221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 47
               

               
Conread position:
               
342-647
               

               
Cow position:
               
chr22:12868648-12868335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 51
               

               
Conread position:
               
342-647
               

               
Cow position:
               
chr22:15759759-15760067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 97
               

               
Conread position:
               
342-647
               

               
Cow position:
               
chr22:39254796-39255110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 98
               

               
Conread position:
               
343-647
               

               
Cow position:
               
chr22:8411923-8412235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 95
               

               
Conread position:
               
345-516
               

               
Cow position:
               
chr22:41983336-41983160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
345-643
               

               
Cow position:
               
chr22:28352280-28351974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 94
               

               
Conread position:
               
345-645
               

               
Cow position:
               
chr22:6713484-6713185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
141, 94
               

               
Conread position:
               
345-647
               

               
Cow position:
               
chr22:34625879-34626183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 64
               

               
Conread position:
               
346-634
               

               
Cow position:
               
chr22:22147348-22147653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
348-648
               

               
Cow position:
               
chr22:31598798-31599102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
139, 91
               

               
Conread position:
               
349-647
               

               
Cow position:
               
chr22:11820298-11819992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
349-647
               

               
Cow position:
               
chr22:30954443-30954750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 91
               
UCSC Genome Browser

               
Conread position:
               
349-647
               

               
Cow position:
               
chr22:36326880-36327185 (view  custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 91
               
UCSC Genome Browser

               
               
               
Conread position:
349-647

               
               
               
Cow position:
chr22:39707856-39708163 (view  custom track)

               
               
               
Alignm length:
311

               
               
               
Alignm identity:
226

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
126, 91
UCSC Genome Browser

               
               
               
Conread position:
350-647

               
               
               
Cow position:
chr22:27577137-27577444 (view  custom track)

               
               
               
Alignm length:
310

               
               
               
Alignm identity:
233

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
125, 90

               
               
               Conread position:351-647
               
               
               Cow position:chr22:6130783-6130477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):124, 89

               
               
               Conread position:351-647
               
               
               Cow position:chr22:28939171-28939477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):124, 89

               
               
               Conread position:351-648
               
               
               Cow position:chr22:32514109-32513795 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:224
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):124, 30

               
               
               Conread position:354-647
               
               
               Cow position:chr22:9969440-9969137 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:229
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):121, 86

               
               
               Conread position:354-647
               
               
               Cow position:chr22:13696007-13695705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):30, 87

               
               
               Conread position:355-546
               
               
               Cow position:chr22:5716843-5717044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):7, 85

               
               
               Conread position:355-646
               
               
               Cow position:chr22:11612837-11613138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:220
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):118, 85

               
               
               Conread position:355-648
               
               
               Cow position:chr22:28664380-28664680 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:218
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):116, 53

               
               
               Conread position:358-646
               
               
               Cow position:chr22:27818413-27818710 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:217
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):97, 14

               
               
               Conread position:360-646
               
               
               Cow position:chr22:39032984-39033280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):115, 79

               
               
               Conread position:360-647
               
               
               Cow position:chr22:16045017-16044718 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:214
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):115, 61

               
               
               Conread position:362-472
               
               
               Cow position:chr22:23595903-23595794 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:111
               
               
               Alignm identity:88
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:365-645
               
               
               Cow position:chr22:40326656-40326945 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:214
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):73, 162

               
               
               Conread position:365-647
               
               
               Cow position:chr22:30819305-30819013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:209
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):16, 68

               
               
               Conread position:368-647
               
               
               Cow position:chr22:1986439-1986719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:206
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):107, 7

               
               
               Conread position:368-648
               
               
               Cow position:chr22:10685657-10685367 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:213
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):63, 73

               
               
               Conread position:369-647
               
               
               Cow position:chr22:4974960-4974681 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):179, 82

               
               
               Conread position:370-634
               
               
               Cow position:chr22:13950606-13950876 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):72, 20

               
               
               Conread position:371-634
               
               
               Cow position:chr22:4292209-4292478 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:206
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):104, 18

               
               
               Conread position:371-641
               
               
               Cow position:chr22:32488031-32487752 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):103, 69

               
               
               Conread position:372-647
               
               
               Cow position:chr22:13234962-13235247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:208
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):112, 68

               
               
               Conread position:372-647
               
               
               Cow position:chr22:25646104-25645819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:211
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):103, 68

               
               
               Conread position:375-627
               
               
               Cow position:chr22:37138870-37139132 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):100, 28

               
               
               Conread position:375-645
               
               
               Cow position:chr22:15929550-15929265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):94, 27

               
               
               Conread position:375-645
               
               
               Cow position:chr22:41971724-41971444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):99, 47

               
               
               Conread position:375-647
               
               
               Cow position:chr22:19340633-19340911 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:202
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):108, 55

               
               
               Conread position:375-647
               
               
               Cow position:chr22:34894403-34894685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:214
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):63, 73

               
               
               Conread position:375-647
               
               
               Cow position:chr22:44936602-44936884 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:204
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):93, 64

               
               
               Conread position:375-648
               
               
               Cow position:chr22:8882450-8882730 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:213
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):59, 118

               
               
               Conread position:376-608
               
               
               Cow position:chr22:19841728-19841970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:178
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):99, 64

               
               
               Conread position:376-641
               
               
               Cow position:chr22:30190393-30190668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):100, 64

               
               
               Conread position:376-646
               
               
               Cow position:chr22:25906487-25906760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):14, 65

               
               
               Conread position:376-647
               
               
               Cow position:chr22:3986942-3987223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:194
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):95, 64

               
               
               Conread position:376-647
               
               
               Cow position:chr22:13329565-13329284 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):99, 64

               
               
               Conread position:376-647
               
               
               Cow position:chr22:43743874-43743596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:208
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):98, 64

               
               
               Conread position:377-642
               
               
               Cow position:chr22:8303415-8303135 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:196
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):79, 194

               
               
               Conread position:377-647
               
               
               Cow position:chr22:11037706-11037985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:196
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):14, 47

               
               
               Conread position:377-647
               
               
               Cow position:chr22:15059402-15059683 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:207
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):92, 63

               
               
               Conread position:378-647
               
               
               Cow position:chr22:36540243-36539964 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:206
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):51, 40

               
               
               Conread position:382-647
               
               
               Cow position:chr22:15537781-15538056 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):93, 58

               
               
               Conread position:383-646
               
               
               Cow position:chr22:779817-780087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:208
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):92, 57

               
               
               Conread position:383-646
               
               
               Cow position:chr22:39748177-39747895 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:204
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):92, 57

               
               
               Conread position:383-647
               
               
               Cow position:chr22:24510278-24509999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):78, 64

               
               
               Conread position:383-647
               
               
               Cow position:chr22:31497671-31497392 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):92, 43

               
               
               Conread position:385-635
               
               
               Cow position:chr22:6718818-6719078 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:196
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):90, 55

               
               
               Conread position:385-647
               
               
               Cow position:chr22:2403358-2403599 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:385-647
               
               
               Cow position:chr22:3301858-3301611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):185, 61

               
               
               Conread position:385-647
               
               
               Cow position:chr22:4120126-4119857 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):52, 132

               
               
               Conread position:386-646
               
               
               Cow position:chr22:1925991-1926268 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:187
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):76, 61

               
               
               Conread position:388-642
               
               
               Cow position:chr22:47740874-47741122 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):6, 48

               
               
               Conread position:388-645
               
               
               Cow position:chr22:36761057-36761316 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:203
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):87, 60

               
               
               Conread position:389-648
               
               
               Cow position:chr22:5836681-5836946 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:185
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):99, 51

               
               
               Conread position:390-647
               
               
               Cow position:chr22:10415359-10415626 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):77, 50

               
               
               Conread position:391-647
               
               
               Cow position:chr22:28356198-28356463 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):83, 49

               
               
               Conread position:392-645
               
               
               Cow position:chr22:4631467-4631715 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):69, 48

               
               
               Conread position:393-645
               
               
               Cow position:chr22:40121417-40121153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:192
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):53, 178

               
               
               Conread position:393-647
               
               
               Cow position:chr22:45113788-45113526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):42, 25

               
               
               Conread position:393-648
               
               
               Cow position:chr22:34900381-34900649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:197
               
               
               Alignm E-value:6e-39
               
               
               Alignm gaps (pig, cow):13, 50

               
               
               Conread position:394-648
               
               
               Cow position:chr22:21567450-21567719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):81, 46

               
               
               Conread position:395-647
               
               
               Cow position:chr22:38959931-38959669 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):80, 52

               
               
               Conread position:397-646
               
               
               Cow position:chr22:10294510-10294762 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):82, 6

               
               
               Conread position:397-647
               
               
               Cow position:chr22:18523700-18523451 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):77, 50

               
               
               Conread position:399-610
               
               
               Cow position:chr22:27510987-27511204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:160
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):60, 41

               
               
               Conread position:400-647
               
               
               Cow position:chr22:2668899-2669156 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):75, 40

               
               
               Conread position:400-647
               
               
               Cow position:chr22:22934940-22935195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):86, 40

               
               
               Conread position:401-647
               
               
               Cow position:chr22:1907491-1907747 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):74, 39

               
               
               Conread position:402-626
               
               
               Cow position:chr22:17295460-17295232 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):74, 38

               
               
               Conread position:408-635
               
               
               Cow position:chr22:982223-982460 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:171
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):67, 32

               
               
               Conread position:409-647
               
               
               Cow position:chr22:39494731-39494493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):98, 40

               
               
               Conread position:410-618
               
               
               Cow position:chr22:7912948-7913170 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):65, 30

               
               
               Conread position:412-647
               
               
               Cow position:chr22:26315945-26316190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):63, 35

               
               
               Conread position:413-645
               
               
               Cow position:chr22:876990-877232 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):48, 27

               
               
               Conread position:413-647
               
               
               Cow position:chr22:8876742-8876982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:165
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):26, 128

               
               
               Conread position:413-647
               
               
               Cow position:chr22:14882644-14882400 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:173
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):61, 27

               
               
               Conread position:415-645
               
               
               Cow position:chr22:28370425-28370655 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:167
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):16, 26

               
               
               Conread position:416-647
               
               
               Cow position:chr22:14376924-14376680 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:177
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):59, 24

               
               
               Conread position:418-646
               
               
               Cow position:chr22:30268815-30269052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:178
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):56, 22

               
               
               Conread position:418-647
               
               
               Cow position:chr22:43292441-43292191 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:188
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):49, 22

               
               
               Conread position:419-645
               
               
               Cow position:chr22:34726149-34726383 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:170
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):42, 28

               
               
               Conread position:437-633
               
               
               Cow position:chr22:18192600-18192795 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):28, 104

               
               
               Conread position:443-597
               
               
               Cow position:chr22:35028979-35029139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:119
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):103, 123

               
               
               Conread position:447-647
               
               
               Cow position:chr22:13011768-13011566 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:146
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):28, 114

               
               
               Conread position:451-648
               
               
               Cow position:chr22:34476485-34476288 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:147
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):24, 16

               
               
               Conread position:453-647
               
               
               Cow position:chr22:138446-138638 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):37, 26

               
               
               Conread position:455-647
               
               
               Cow position:chr22:27385523-27385331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:136
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):8, 103

               
               
               Conread position:455-648
               
               
               Cow position:chr22:15920116-15919923 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:152
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):11, 104

               
               
               Conread position:457-646
               
               
               Cow position:chr22:37230525-37230721 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):94, 76

               
               
               Conread position:457-647
               
               
               Cow position:chr22:32189317-32189127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:135
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):8, 110

               
               
               Conread position:459-642
               
               
               Cow position:chr22:1610235-1610050 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):16, 67

               
               
               Conread position:461-645
               
               
               Cow position:chr22:2147648-2147831 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):104, 0

               
               
               Conread position:461-645
               
               
               Cow position:chr22:11258211-11258029 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:461-647
               
               
               Cow position:chr22:3433069-3432884 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:461-647
               
               
               Cow position:chr22:15568525-15568331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):87, 155

               
               
               Conread position:461-647
               
               
               Cow position:chr22:17810870-17811055 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:142
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:461-647
               
               
               Cow position:chr22:44463057-44463242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:461-648
               
               
               Cow position:chr22:16883702-16883519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:139
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):96, 0

               
               
               Conread position:461-648
               
               
               Cow position:chr22:41136847-41137024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:463-622
               
               
               Cow position:chr22:15976804-15976963 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:122
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):69, 26

               
               
               Conread position:463-647
               
               
               Cow position:chr22:891613-891428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:132
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):28, 97

               
               
               Conread position:463-647
               
               
               Cow position:chr22:25967974-25967792 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:463-647
               
               
               Cow position:chr22:35934018-35933837 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:464-633
               
               
               Cow position:chr22:3540148-3540316 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:128
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-633
               
               
               Cow position:chr22:13293270-13293437 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:120
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:464-635
               
               
               Cow position:chr22:4535790-4535624 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:126
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:464-635
               
               
               Cow position:chr22:31513634-31513458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:129
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):84, 171

               
               
               Conread position:464-635
               
               
               Cow position:chr22:32326340-32326509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):23, 102

               
               
               Conread position:464-643
               
               
               Cow position:chr22:11489072-11489248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:464-644
               
               
               Cow position:chr22:36609941-36609765 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:126
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:464-645
               
               
               Cow position:chr22:2523055-2523234 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:136
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:464-645
               
               
               Cow position:chr22:25246439-25246619 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:464-646
               
               
               Cow position:chr22:4061542-4061363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:533962-534144 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:137
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):74, 15

               
               
               Conread position:464-647
               
               
               Cow position:chr22:697965-698147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:135
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:1710094-1710275 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):95, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:3027610-3027792 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:134
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:3254268-3254087 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:4043468-4043647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:132
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:7360078-7359896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:11679012-11678830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:12889892-12889711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:12901745-12901927 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:13241964-13242147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):70, 102

               
               
               Conread position:464-647
               
               
               Cow position:chr22:13299964-13300131 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:136
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:15398113-15397931 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:135
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:17059648-17059830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:19591932-19592125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:23861666-23861484 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:134
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):87, 19

               
               
               Conread position:464-647
               
               
               Cow position:chr22:26070152-26070339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):67, 106

               
               
               Conread position:464-647
               
               
               Cow position:chr22:26098079-26097899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:26799788-26799606 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:136
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:27432452-27432269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:141
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):24, 103

               
               
               Conread position:464-647
               
               
               Cow position:chr22:31213100-31213280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):24, 94

               
               
               Conread position:464-647
               
               
               Cow position:chr22:33196303-33196121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:33986233-33986054 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:135
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:38949385-38949203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:40399736-40399915 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:44490355-44490537 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:136
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-647
               
               
               Cow position:chr22:45365651-45365833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:464-648
               
               
               Cow position:chr22:10323239-10323422 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):94, 0

               
               
               Conread position:464-648
               
               
               Cow position:chr22:18844016-18843828 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):75, 169

               
               
               Conread position:464-648
               
               
               Cow position:chr22:23854468-23854650 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:186
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):31, 76

               
               
               Conread position:464-648
               
               
               Cow position:chr22:33952662-33952487 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:465-647
               
               
               Cow position:chr22:24911594-24911784 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):23, 108

               
               
               Conread position:467-601
               
               
               Cow position:chr22:24411114-24410979 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:101
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:467-645
               
               
               Cow position:chr22:911640-911811 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:133
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):92, 0

               
               
               Conread position:467-645
               
               
               Cow position:chr22:12637215-12637391 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:467-646
               
               
               Cow position:chr22:30689162-30689341 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):28, 77

               
               
               Conread position:467-646
               
               
               Cow position:chr22:44402164-44402342 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:467-647
               
               
               Cow position:chr22:321954-321775 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:138
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:467-647
               
               
               Cow position:chr22:1727357-1727535 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:126
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:467-647
               
               
               Cow position:chr22:8323784-8323959 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:129
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):160, 90

               
               
               Conread position:467-647
               
               
               Cow position:chr22:8357146-8357325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:138
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):103, 0

               
               
               Conread position:467-647
               
               
               Cow position:chr22:13940381-13940558 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:467-647
               
               
               Cow position:chr22:18258759-18258939 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:140
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:467-647
               
               
               Cow position:chr22:19241657-19241478 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:140
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:467-647
               
               
               Cow position:chr22:44740637-44740817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):42, 93

               
               
               Conread position:467-648
               
               
               Cow position:chr22:26106589-26106770 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:140
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):83, 93

               
               
               Conread position:468-644
               
               
               Cow position:chr22:15960236-15960067 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:129
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):27, 65

               
               
               Conread position:468-645
               
               
               Cow position:chr22:21011926-21012102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):97, 0

               
               
               Conread position:468-647
               
               
               Cow position:chr22:3960768-3960585 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:135
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:468-647
               
               
               Cow position:chr22:10161499-10161677 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:468-647
               
               
               Cow position:chr22:10165153-10165331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:125
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:468-647
               
               
               Cow position:chr22:12975078-12974900 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:181
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):22, 15

               
               
               Conread position:468-647
               
               
               Cow position:chr22:18026023-18025846 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:134
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:469-646
               
               
               Cow position:chr22:23742167-23741994 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:135
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:469-647
               
               
               Cow position:chr22:1274628-1274451 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:469-647
               
               
               Cow position:chr22:5467834-5467657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:136
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:469-647
               
               
               Cow position:chr22:10532030-10532207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:144
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:469-647
               
               
               Cow position:chr22:25691484-25691306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:132
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):19, 90

               
               
               Conread position:470-642
               
               
               Cow position:chr22:47373997-47373822 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:133
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):69, 25

               
               
               Conread position:470-647
               
               
               Cow position:chr22:18925887-18926065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:136
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):74, 98

               
               
               Conread position:470-647
               
               
               Cow position:chr22:34735185-34735361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:470-647
               
               
               Cow position:chr22:44382365-44382541 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:132
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:471-627
               
               
               Cow position:chr22:8117150-8116995 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:118
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:471-647
               
               
               Cow position:chr22:18196044-18196219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:135
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):87, 0

               
               
               Conread position:471-647
               
               
               Cow position:chr22:19574530-19574354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:130
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):11, 87

               
               
               Conread position:471-647
               
               
               Cow position:chr22:26785674-26785850 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:134
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):147, 87

               
               
               Conread position:471-648
               
               
               Cow position:chr22:28071094-28071270 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:136
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):171, 51

               
               
               Conread position:472-647
               
               
               Cow position:chr22:26151580-26151408 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:129
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:472-647
               
               
               Cow position:chr22:28289622-28289796 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):93, 0

               
               
               Conread position:473-647
               
               
               Cow position:chr22:16292117-16292290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:138
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):16, 157

               
               
               Conread position:473-648
               
               
               Cow position:chr22:27321855-27322035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):81, 171

               
               
               Conread position:474-635
               
               
               Cow position:chr22:31646033-31646193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:124
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:474-645
               
               
               Cow position:chr22:11146442-11146614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:131
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):37, 85

               
               
               Conread position:475-645
               
               
               Cow position:chr22:40366150-40365989 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:171
               
               
               Alignm identity:124
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:475-647
               
               
               Cow position:chr22:15837531-15837702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:130
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:478-632
               
               
               Cow position:chr22:16236106-16235954 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:124
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:478-647
               
               
               Cow position:chr22:10065367-10065193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:131
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):65, 93

               
               
               Conread position:479-647
               
               
               Cow position:chr22:32407533-32407366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:479-647
               
               
               Cow position:chr22:43238063-43237896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:169
               
               
               Alignm identity:132
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):86, 0

               
               
               Conread position:483-645
               
               
               Cow position:chr22:4337657-4337818 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:483-645
               
               
               Cow position:chr22:11805590-11805430 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:122
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:483-645
               
               
               Cow position:chr22:23832821-23832982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:119
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:483-647
               
               
               Cow position:chr22:6123337-6123174 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:123
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:483-647
               
               
               Cow position:chr22:6754700-6754540 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:129
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):84, 0

               
               
               Conread position:483-647
               
               
               Cow position:chr22:11987665-11987503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):66, 43

               
               
               Conread position:483-647
               
               
               Cow position:chr22:14825012-14824848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:126
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):95, 74

               
               
               Conread position:483-647
               
               
               Cow position:chr22:14986489-14986326 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):83, 0

               
               
               Conread position:483-647
               
               
               Cow position:chr22:17074625-17074783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:483-647
               
               
               Cow position:chr22:19822972-19823133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:120
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:483-647
               
               
               Cow position:chr22:25341371-25341535 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:123
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):133, 74

               
               
               Conread position:483-647
               
               
               Cow position:chr22:30206701-30206540 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:119
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):67, 72

               
               
               Conread position:483-647
               
               
               Cow position:chr22:34611018-34611180 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:119
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:484-634
               
               
               Cow position:chr22:24527510-24527363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):82, 0

               
               
               Conread position:485-624
               
               
               Cow position:chr22:28640582-28640444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:105
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):61, 75

               
               
               Conread position:485-646
               
               
               Cow position:chr22:1835654-1835812 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:485-647
               
               
               Cow position:chr22:1289956-1289796 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:117
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:485-647
               
               
               Cow position:chr22:25764260-25764099 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:128
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:485-647
               
               
               Cow position:chr22:32698345-32698506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):50, 58

               
               
               Conread position:487-625
               
               
               Cow position:chr22:45112815-45112682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:109
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):134, 13

               
               
               Conread position:487-648
               
               
               Cow position:chr22:11371022-11370859 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:118
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):78, 17

               
               
               Conread position:488-647
               
               
               Cow position:chr22:19713851-19713693 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:160
               
               
               Alignm identity:123
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:489-647
               
               
               Cow position:chr22:44717277-44717431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:124
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:489-647
               
               
               Cow position:chr22:45513965-45513809 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:492-647
               
               
               Cow position:chr22:24185847-24185695 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:118
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:493-627
               
               
               Cow position:chr22:8446411-8446544 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:100
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):73, 0

               
               
               Conread position:493-647
               
               
               Cow position:chr22:3731081-3730928 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:115
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:493-647
               
               
               Cow position:chr22:36188882-36189035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:114
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:494-647
               
               
               Cow position:chr22:10586418-10586268 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:119
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:497-647
               
               
               Cow position:chr22:17191340-17191489 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:113
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:498-647
               
               
               Cow position:chr22:13620182-13620034 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:150
               
               
               Alignm identity:113
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:499-645
               
               
               Cow position:chr22:14091664-14091519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:114
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:499-646
               
               
               Cow position:chr22:1307396-1307249 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:113
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):79, 59

               
               
               Conread position:499-647
               
               
               Cow position:chr22:6085232-6085085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:108
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:499-647
               
               
               Cow position:chr22:16048067-16048214 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:112
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):58, 0

               
               
               Conread position:499-647
               
               
               Cow position:chr22:38313918-38313771 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:115
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:500-648
               
               
               Cow position:chr22:17813802-17813949 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:149
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:502-646
               
               
               Cow position:chr22:34618301-34618446 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:111
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):11, 65

               
               
               Conread position:502-647
               
               
               Cow position:chr22:34615878-34616023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:108
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):47, 56

               
               
               Conread position:502-648
               
               
               Cow position:chr22:8227735-8227589 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:113
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):141, 55

               
               
               Conread position:503-646
               
               
               Cow position:chr22:20626414-20626552 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:115
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:505-647
               
               
               Cow position:chr22:17936393-17936252 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:108
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:506-647
               
               
               Cow position:chr22:817506-817364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:143
               
               
               Alignm identity:104
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:506-647
               
               
               Cow position:chr22:26018485-26018345 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:108
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:506-647
               
               
               Cow position:chr22:30709975-30710116 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:109
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:506-647
               
               
               Cow position:chr22:31307888-31308034 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:147
               
               
               Alignm identity:112
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):55, 0

               
               
               Conread position:506-647
               
               
               Cow position:chr22:32338571-32338711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:107
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:506-647
               
               
               Cow position:chr22:45039722-45039862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:109
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:507-647
               
               
               Cow position:chr22:39246902-39247041 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:107
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:507-648
               
               
               Cow position:chr22:21890787-21890647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:110
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:508-646
               
               
               Cow position:chr22:25537560-25537703 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:111
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):31, 63

               
               
               Conread position:508-647
               
               
               Cow position:chr22:19376179-19376323 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:113
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:509-647
               
               
               Cow position:chr22:9277785-9277922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:106
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:509-647
               
               
               Cow position:chr22:27616788-27616650 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:107
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):8, 49

               
               
               Conread position:512-647
               
               
               Cow position:chr22:10267050-10266917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:136
               
               
               Alignm identity:102
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):53, 0

               
               
               Conread position:515-641
               
               
               Cow position:chr22:13206262-13206139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:102
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:519-647
               
               
               Cow position:chr22:19503427-19503554 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:100
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:520-647
               
               
               Cow position:chr22:34311440-34311566 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:128
               
               
               Alignm identity:97
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:522-642
               
               
               Cow position:chr22:11046781-11046898 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:96
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:522-647
               
               
               Cow position:chr22:38940361-38940237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:126
               
               
               Alignm identity:97
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):48, 0

               
               
               Conread position:531-647
               
               
               Cow position:chr22:30583086-30583201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:117
               
               
               Alignm identity:92
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):27, 0

               
               
               Conread position:535-647
               
               
               Cow position:chr22:13279949-13280062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:114
               
               
               Alignm identity:90
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:541-647
               
               
               Cow position:chr22:28938302-28938197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:107
               
               
               Alignm identity:87
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:544-647
               
               
               Cow position:chr22:29658306-29658204 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:104
               
               
               Alignm identity:86
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:553-647
               
               
               Cow position:chr22:36569925-36569831 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:95
               
               
               Alignm identity:79
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):0, 0
Show alignments to all cow chromosomes.