Cow genome map

Conread name: Ss1.1-Pig4-TMW8030K08.5

Conread position: 3-486
Cow position: chr10:8996702-8996219 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 71

Conread position: 4-530
Cow position: chr10:8996785-8996259 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 154

Conread position: 5-519
Cow position: chr10:8996616-8996102 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-524
Cow position: chr10:8996531-8996013 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 337

Conread position: 12-420
Cow position: chr10:9010253-9009845 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 259
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 12-486
Cow position: chr10:9031400-9031856 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 266
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 401, 183

Conread position: 12-523
Cow position: chr10:9010505-9009994 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 321

Conread position: 12-531
Cow position: chr10:8996357-8995842 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 62

Conread position: 13-496
Cow position: chr10:9010336-9009853 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 68

Conread position: 15-452
Cow position: chr10:8996438-8996001 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-482
Cow position: chr10:21939003-21938534 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 303
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 113, 118

Conread position: 18-486
Cow position: chr10:9010415-9009947 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 293
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 109, 102

Conread position: 79-530
Cow position: chr10:21939110-21938661 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 293
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 220, 225

Conread position: 80-485
Cow position: chr10:9010521-9010116 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 88-444
Cow position: chr10:9031308-9031664 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 92-523
Cow position: chr10:9010593-9010162 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 276
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 62, 68

Conread position: 94-523
Cow position: chr10:8996863-8996434 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 95-475
Cow position: chr10:9031231-9031611 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 65

Conread position: 102-483
Cow position: chr10:21939171-21938789 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 238
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 236, 240

Conread position: 127-320
Cow position: chr10:9031664-9031858 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 150, 0

Conread position: 134-502
Cow position: chr10:21939223-21938855 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 231
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 100, 111

Conread position: 190-519
Cow position: chr10:9031242-9031571 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 54

Conread position: 190-525
Cow position: chr10:8996851-8996516 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 135

Conread position: 193-525
Cow position: chr10:9010574-9010244 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 215
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 225-607
Cow position: chr10:8996900-8996511 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 241
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 263, 268

Conread position: 263-525
Cow position: chr10:9031231-9031493 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 65

Conread position: 648-828
Cow position: chr10:38288874-38288690 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 31, 15

Show alignments to all cow chromosomes.