Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030K08.5 |
| Conread position: | 1-359 |
| Cow position: | chr13:39984545-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-487 |
| Cow position: | chr13:39984041-39984527 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 71 |
| Conread position: | 1-524 |
| Cow position: | chr13:39984377-39984900 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 73 |
| Conread position: | 5-267 |
| Cow position: | chr13:56292053-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 5-486 |
| Cow position: | chr13:56333777-56334267 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 301 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 46, 75 |
| Conread position: | 6-487 |
| Cow position: | chr13:39984130-39984611 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 144 |
| Conread position: | 6-525 |
| Cow position: | chr13:56333694-56334222 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 330 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 54, 90 |
| Conread position: | 6-605 |
| Cow position: | chr13:39984298-39984904 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 146 |
| Conread position: | 15-486 |
| Cow position: | chr13:39984223-39984694 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 15-607 |
| Cow position: | chr13:39983887-39984486 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 17-604 |
| Cow position: | chr13:39983973-39984567 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 135 |
| Conread position: | 72-402 |
| Cow position: | chr13:56317912-56318242 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 97, 82 |
| Conread position: | 80-435 |
| Cow position: | chr13:56292146-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 239, 248 |
| Conread position: | 90-487 |
| Cow position: | chr13:56317409-56317799 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 90-524 |
| Cow position: | chr13:56333610-56334044 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 82, 64 |
| Conread position: | 94-525 |
| Cow position: | chr13:29183755-29183328 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 181, 62 |
| Conread position: | 121-479 |
| Cow position: | chr13:56292186-56291830 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 237 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 328, 28 |
| Conread position: | 137-486 |
| Cow position: | chr13:39983841-39984190 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-437 |
| Cow position: | chr13:56334113-56334384 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 166-525 |
| Cow position: | chr13:56292301-56291953 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 180-487 |
| Cow position: | chr13:56317936-56318243 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 185-409 |
| Cow position: | chr13:56292708-56292484 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 192-503 |
| Cow position: | chr13:39983812-39984123 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 608-761 |
| Cow position: | chr13:986330-986481 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 96, 19 |
Show alignments to all cow chromosomes.