Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8030K08.5
        

               Conread position:
               3-524
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               3-530
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 250
               

               Conread position:
               4-372
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               4-532
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 149
               

               Conread position:
               5-320
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-363
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-367
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               81, 92
               

               Conread position:
               5-400
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               249
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               336, 327
               

               Conread position:
               5-523
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               318
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               286, 72
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               524, 0
               

               Conread position:
               6-402
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-477
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-478
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-517
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               305
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-525
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 154
               

               Conread position:
               6-532
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               523, 0
               

               Conread position:
               6-532
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               523, 0
               

               Conread position:
               6-532
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 63
               

               Conread position:
               7-486
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               305
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               10, 159
               

               Conread position:
               8-496
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               304
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               56, 6
               

               Conread position:
               11-356
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-394
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               165, 142
               

               Conread position:
               11-523
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               310
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               241, 53
               

               Conread position:
               12-271
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               55, 61
               

               Conread position:
               12-400
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-448
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 42
               

               Conread position:
               12-463
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               415, 402
               

               Conread position:
               12-478
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               12-478
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               280
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               455, 446
               

               Conread position:
               12-484
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               288
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               107, 115
               

               Conread position:
               12-486
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-488
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-523
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               318
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               306, 322
               

               Conread position:
               12-523
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               393, 421
               

               Conread position:
               12-523
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               315
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               497, 491
               

               Conread position:
               12-523
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               320
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               105, 110
               

               Conread position:
               12-524
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               321
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               12-524
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               303
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               309, 315
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-530
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               319
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               392, 420
               

               Conread position:
               12-530
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               328
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               168, 149
               

               Conread position:
               12-532
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 144
               

               Conread position:
               13-280
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-483
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               299
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               41, 58
               

               Conread position:
               13-523
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               309
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-523
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-523
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 41
               

               Conread position:
               13-524
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               318
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               66, 57
               

               Conread position:
               14-502
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 59
               

               Conread position:
               14-532
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               515, 0
               

               Conread position:
               14-534
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               404, 35
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               15-400
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               325, 313
               

               Conread position:
               15-467
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 444
               

               Conread position:
               15-483
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               161, 154
               

               Conread position:
               15-486
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               381, 417
               

               Conread position:
               15-488
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 310
               

               Conread position:
               16-484
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 137
               

               Conread position:
               16-532
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 137
               

               Conread position:
               18-364
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               73, 52
               

               Conread position:
               18-441
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               241, 179
               

               Conread position:
               18-478
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 80
               

               Conread position:
               18-478
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               281
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               75, 82
               

               Conread position:
               18-478
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               59, 82
               

               Conread position:
               18-478
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               51, 72
               

               Conread position:
               18-479
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               292
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               147, 135
               

               Conread position:
               18-486
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-502
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-523
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               135, 140
               

               Conread position:
               18-523
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               313
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               462, 475
               

               Conread position:
               18-523
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               305
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               45, 55
               

               Conread position:
               18-523
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-523
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               379, 402
               

               Conread position:
               18-523
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 72
               

               Conread position:
               18-534
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               314
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               46, 36
               

               Conread position:
               26-478
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               274
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               43, 64
               

               Conread position:
               27-478
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               306, 294
               

               Conread position:
               78-478
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               243
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               243, 247
               

               Conread position:
               79-523
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               270
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               350, 360
               

               Conread position:
               90-403
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               239, 230
               

               Conread position:
               90-523
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               231, 235
               

               Conread position:
               94-517
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               83, 90
               

               Conread position:
               94-523
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               177, 168
               

               Conread position:
               94-532
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               96-523
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               252
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               98-488
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               190, 197
               

               Conread position:
               98-530
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               258
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               53, 62
               

               Conread position:
               100-525
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               221, 48
               

               Conread position:
               105-523
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 237
               

               Conread position:
               110-532
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               419, 0
               

               Conread position:
               111-523
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               205, 214
               

               Conread position:
               125-479
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               217, 201
               

               Conread position:
               126-530
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               162-524
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               171, 158
               

               Conread position:
               162-532
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               364, 0
               

               Conread position:
               173-490
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               148, 116
               

               Conread position:
               192-523
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               221, 226
               

               Conread position:
               195-526
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               248-532
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 76
               

               Conread position:
               255-530
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               175, 108
               

               Conread position:
               262-484
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.