Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8030K08.5
        

               Conread position:
               3-523
               

               Cow position:
               chr16:14627525-14627003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 411
               

               Conread position:
               6-461
               

               Cow position:
               chr16:14627184-14626729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-486
               

               Cow position:
               chr16:14627856-14627376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-525
               

               Cow position:
               chr16:14627352-14626833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               489, 482
               

               Conread position:
               6-532
               

               Cow position:
               chr16:14627772-14627247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 62
               

               Conread position:
               11-525
               

               Cow position:
               chr16:14627263-14626749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               458, 482
               

               Conread position:
               86-468
               

               Cow position:
               chr16:14627943-14627562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               91-523
               

               Cow position:
               chr16:14627857-14627423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               189-524
               

               Cow position:
               chr16:14627925-14627590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               224, 217
               

               Conread position:
               282-525
               

               Cow position:
               chr16:14627916-14627673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               215, 206
               
Show alignments to all cow chromosomes.