Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8030K08.5
        

               Conread position:
               3-395
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               232, 88
               

               Conread position:
               3-485
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               338, 264
               

               Conread position:
               3-525
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 153
               

               Conread position:
               4-486
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               4-523
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               333, 317
               

               Conread position:
               4-566
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 160
               

               Conread position:
               5-335
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 49
               

               Conread position:
               5-399
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               156, 148
               

               Conread position:
               5-479
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-482
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               160, 149
               

               Conread position:
               5-502
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-506
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 92
               

               Conread position:
               5-519
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-523
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 67
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 319
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               335
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               79, 65
               

               Conread position:
               6-456
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 74
               

               Conread position:
               6-458
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               6-458
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 233
               

               Conread position:
               6-467
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 154
               

               Conread position:
               6-530
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 238
               

               Conread position:
               6-530
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 148
               

               Conread position:
               6-604
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 73
               

               Conread position:
               6-604
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               375, 382
               

               Conread position:
               11-446
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 62
               

               Conread position:
               11-619
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 80
               

               Conread position:
               12-311
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               246, 0
               

               Conread position:
               12-396
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               154, 147
               

               Conread position:
               12-445
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 314
               

               Conread position:
               12-484
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               413, 12
               

               Conread position:
               12-496
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-516
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 142
               

               Conread position:
               12-518
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 61
               

               Conread position:
               12-523
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 313
               

               Conread position:
               12-523
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               463, 480
               

               Conread position:
               12-523
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 80
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               392, 421
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 230
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 62
               

               Conread position:
               12-530
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 313
               

               Conread position:
               12-532
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               390, 405
               

               Conread position:
               12-607
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               372
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               392, 407
               

               Conread position:
               13-525
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-523
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 59
               

               Conread position:
               14-525
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 0
               

               Conread position:
               14-525
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-525
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 320
               

               Conread position:
               15-484
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 67
               

               Conread position:
               15-525
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 136
               

               Conread position:
               15-530
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 301
               

               Conread position:
               17-488
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 147
               

               Conread position:
               17-532
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 147
               

               Conread position:
               18-523
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 230
               

               Conread position:
               18-525
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-532
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 308
               

               Conread position:
               26-523
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 43
               

               Conread position:
               26-525
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               79-525
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 17
               

               Conread position:
               80-485
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 246
               

               Conread position:
               86-486
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               90-532
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               320, 329
               

               Conread position:
               91-486
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               344, 0
               

               Conread position:
               94-486
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               94-519
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 231
               

               Conread position:
               94-525
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               331, 322
               

               Conread position:
               94-604
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               453, 447
               

               Conread position:
               95-518
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 225
               

               Conread position:
               96-489
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 135
               

               Conread position:
               96-530
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 116
               

               Conread position:
               106-604
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               326
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               425, 16
               

               Conread position:
               112-486
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               42, 48
               

               Conread position:
               117-523
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               248
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               264, 68
               

               Conread position:
               121-485
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               30, 155
               

               Conread position:
               121-523
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               33, 42
               

               Conread position:
               125-523
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               281, 13
               

               Conread position:
               156-607
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               288
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               38, 53
               

               Conread position:
               190-532
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               313, 0
               

               Conread position:
               192-530
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               194-486
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               41, 16
               

               Conread position:
               199-486
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               215-485
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               274-484
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               176, 67
               

               Conread position:
               278-528
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.