Cow genome map

Conread name: Ss1.1-Pig4-TMW8030K08.5

Conread position: 2-486
Cow position:
Alignm length: 487
Alignm identity: 304
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 71

Conread position: 2-530
Cow position:
Alignm length: 533
Alignm identity: 316
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 68, 79

Conread position: 3-530
Cow position:
Alignm length: 532
Alignm identity: 331
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 51, 69

Conread position: 4-311
Cow position:
Alignm length: 308
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 4-400
Cow position:
Alignm length: 399
Alignm identity: 257
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 149, 154

Conread position: 4-486
Cow position:
Alignm length: 487
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 69

Conread position: 4-525
Cow position:
Alignm length: 539
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 5-312
Cow position:
Alignm length: 310
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 87

Conread position: 5-364
Cow position:
Alignm length: 362
Alignm identity: 235
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 151, 146

Conread position: 5-371
Cow position:
Alignm length: 368
Alignm identity: 239
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 72, 86

Conread position: 5-396
Cow position:
Alignm length: 395
Alignm identity: 249
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 231, 259

Conread position: 5-403
Cow position:
Alignm length: 401
Alignm identity: 250
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 109, 117

Conread position: 5-486
Cow position:
Alignm length: 487
Alignm identity: 302
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 109, 117

Conread position: 5-486
Cow position:
Alignm length: 486
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 70

Conread position: 5-486
Cow position:
Alignm length: 483
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 49

Conread position: 5-486
Cow position:
Alignm length: 484
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 67

Conread position: 5-486
Cow position:
Alignm length: 484
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 240

Conread position: 5-486
Cow position:
Alignm length: 487
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 84

Conread position: 5-517
Cow position:
Alignm length: 516
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 322

Conread position: 5-519
Cow position:
Alignm length: 519
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 244

Conread position: 5-525
Cow position:
Alignm length: 523
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 333

Conread position: 5-530
Cow position:
Alignm length: 530
Alignm identity: 327
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 18

Conread position: 5-532
Cow position:
Alignm length: 531
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 146

Conread position: 6-400
Cow position:
Alignm length: 398
Alignm identity: 252
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 153, 145

Conread position: 6-401
Cow position:
Alignm length: 398
Alignm identity: 236
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 91

Conread position: 6-455
Cow position:
Alignm length: 455
Alignm identity: 286
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 167, 157

Conread position: 6-456
Cow position:
Alignm length: 451
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-456
Cow position:
Alignm length: 451
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-486
Cow position:
Alignm length: 482
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 230

Conread position: 6-491
Cow position:
Alignm length: 488
Alignm identity: 300
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 337, 327

Conread position: 6-517
Cow position:
Alignm length: 517
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 68

Conread position: 6-523
Cow position:
Alignm length: 525
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 83

Conread position: 6-525
Cow position:
Alignm length: 521
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 469, 486

Conread position: 6-528
Cow position:
Alignm length: 524
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 230

Conread position: 6-529
Cow position:
Alignm length: 524
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-530
Cow position:
Alignm length: 526
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 69

Conread position: 6-530
Cow position:
Alignm length: 527
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 415

Conread position: 7-479
Cow position:
Alignm length: 473
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-523
Cow position:
Alignm length: 520
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 6

Conread position: 12-368
Cow position:
Alignm length: 357
Alignm identity: 228
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 12-452
Cow position:
Alignm length: 442
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 322

Conread position: 12-485
Cow position:
Alignm length: 477
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 169

Conread position: 12-486
Cow position:
Alignm length: 476
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 42

Conread position: 12-519
Cow position:
Alignm length: 509
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 313

Conread position: 12-519
Cow position:
Alignm length: 511
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 151

Conread position: 12-523
Cow position:
Alignm length: 514
Alignm identity: 318
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 402, 406

Conread position: 12-523
Cow position:
Alignm length: 515
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 42

Conread position: 12-523
Cow position:
Alignm length: 513
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 322

Conread position: 12-523
Cow position:
Alignm length: 513
Alignm identity: 311
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 418, 427

Conread position: 12-525
Cow position:
Alignm length: 518
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 12-525
Cow position:
Alignm length: 516
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 140

Conread position: 12-525
Cow position:
Alignm length: 514
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-525
Cow position:
Alignm length: 514
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-525
Cow position:
Alignm length: 518
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 140

Conread position: 12-527
Cow position:
Alignm length: 517
Alignm identity: 312
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 463, 481

Conread position: 12-530
Cow position:
Alignm length: 520
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 469, 480

Conread position: 12-532
Cow position:
Alignm length: 524
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 313

Conread position: 12-532
Cow position:
Alignm length: 522
Alignm identity: 316
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 55, 61

Conread position: 12-532
Cow position:
Alignm length: 522
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 313

Conread position: 12-537
Cow position:
Alignm length: 529
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 63

Conread position: 13-467
Cow position:
Alignm length: 461
Alignm identity: 298
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 63, 55

Conread position: 13-480
Cow position:
Alignm length: 469
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 321

Conread position: 13-484
Cow position:
Alignm length: 474
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 60

Conread position: 13-486
Cow position:
Alignm length: 478
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 238

Conread position: 13-486
Cow position:
Alignm length: 474
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 13-530
Cow position:
Alignm length: 520
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 405

Conread position: 13-530
Cow position:
Alignm length: 520
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 405

Conread position: 15-483
Cow position:
Alignm length: 472
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 221

Conread position: 15-523
Cow position:
Alignm length: 511
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 140

Conread position: 15-524
Cow position:
Alignm length: 512
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 140

Conread position: 16-530
Cow position:
Alignm length: 515
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 16-530
Cow position:
Alignm length: 515
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-484
Cow position:
Alignm length: 468
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 459, 0

Conread position: 18-486
Cow position:
Alignm length: 470
Alignm identity: 291
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 303, 316

Conread position: 18-486
Cow position:
Alignm length: 472
Alignm identity: 291
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 61

Conread position: 18-486
Cow position:
Alignm length: 472
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 72

Conread position: 18-486
Cow position:
Alignm length: 475
Alignm identity: 306
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 60, 50

Conread position: 18-532
Cow position:
Alignm length: 515
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 511, 0

Conread position: 20-484
Cow position:
Alignm length: 467
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 137

Conread position: 20-530
Cow position:
Alignm length: 517
Alignm identity: 329
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 52

Conread position: 24-523
Cow position:
Alignm length: 504
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 134

Conread position: 29-523
Cow position:
Alignm length: 498
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 298

Conread position: 63-486
Cow position:
Alignm length: 426
Alignm identity: 263
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 57

Conread position: 79-485
Cow position:
Alignm length: 411
Alignm identity: 252
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 29

Conread position: 79-486
Cow position:
Alignm length: 408
Alignm identity: 245
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 89-452
Cow position:
Alignm length: 366
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 236

Conread position: 90-486
Cow position:
Alignm length: 399
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 15

Conread position: 94-524
Cow position:
Alignm length: 436
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 247

Conread position: 94-526
Cow position:
Alignm length: 433
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 95-525
Cow position:
Alignm length: 431
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 96-519
Cow position:
Alignm length: 431
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 64

Conread position: 96-525
Cow position:
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 238

Conread position: 101-484
Cow position:
Alignm length: 384
Alignm identity: 231
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 112-526
Cow position:
Alignm length: 416
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 213

Conread position: 114-483
Cow position:
Alignm length: 372
Alignm identity: 238
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 293, 304

Conread position: 114-484
Cow position:
Alignm length: 371
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 8, 0

Conread position: 116-486
Cow position:
Alignm length: 372
Alignm identity: 231
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 310, 7

Conread position: 121-526
Cow position:
Alignm length: 406
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-530
Cow position:
Alignm length: 411
Alignm identity: 247
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 30, 38

Conread position: 124-532
Cow position:
Alignm length: 410
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 125-530
Cow position:
Alignm length: 406
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-486
Cow position:
Alignm length: 363
Alignm identity: 226
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 34

Conread position: 145-523
Cow position:
Alignm length: 382
Alignm identity: 234
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 191, 174

Conread position: 171-484
Cow position:
Alignm length: 318
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 178, 157

Conread position: 191-478
Cow position:
Alignm length: 291
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 130, 135

Conread position: 196-400
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 125, 129

Conread position: 198-525
Cow position:
Alignm length: 328
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 0

Conread position: 208-485
Cow position:
Alignm length: 278
Alignm identity: 175
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 208-530
Cow position:
Alignm length: 323
Alignm identity: 196
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 258-519
Cow position:
Alignm length: 263
Alignm identity: 182
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 167, 157

Conread position: 263-530
Cow position:
Alignm length: 268
Alignm identity: 169
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 276-530
Cow position:
Alignm length: 255
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.