Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8030K08.5 |
| Conread position: | 3-296 |
| Cow position: | chr24:17013224-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 283, 0 |
| Conread position: | 3-464 |
| Cow position: | chr24:17035394-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 444, 0 |
| Conread position: | 3-479 |
| Cow position: | chr24:17035646-17035170 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 322 |
| Conread position: | 3-503 |
| Cow position: | chr24:17036486-17035986 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 322 |
| Conread position: | 3-523 |
| Cow position: | chr24:17035898-17035378 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-294 |
| Cow position: | chr24:17070773-17071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-375 |
| Cow position: | chr24:17070689-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-523 |
| Cow position: | chr24:17036565-17036050 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 390, 12 |
| Conread position: | 6-484 |
| Cow position: | chr24:17077946-17077469 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 442, 0 |
| Conread position: | 6-523 |
| Cow position: | chr24:17035559-17035042 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 67 |
| Conread position: | 6-523 |
| Cow position: | chr24:17036147-17035630 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 471, 487 |
| Conread position: | 6-523 |
| Cow position: | chr24:17036399-17035882 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 319 |
| Conread position: | 6-530 |
| Cow position: | chr24:17035811-17035287 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-459 |
| Cow position: | chr24:17070612-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 233 |
| Conread position: | 12-484 |
| Cow position: | chr24:17070528-17071001 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 463, 0 |
| Conread position: | 12-486 |
| Cow position: | chr24:17036309-17035835 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 315 |
| Conread position: | 12-524 |
| Cow position: | chr24:17035469-17034957 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 314 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 395, 399 |
| Conread position: | 12-524 |
| Cow position: | chr24:17078108-17077596 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 313 |
| Conread position: | 12-525 |
| Cow position: | chr24:17078276-17077763 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 313 |
| Conread position: | 12-530 |
| Cow position: | chr24:17035721-17035203 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 313 |
| Conread position: | 12-530 |
| Cow position: | chr24:17070444-17070962 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-532 |
| Cow position: | chr24:17036225-17035706 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 13-484 |
| Cow position: | chr24:17036056-17035585 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-486 |
| Cow position: | chr24:17078022-17077550 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 93-464 |
| Cow position: | chr24:17013146-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 0 |
| Conread position: | 94-502 |
| Cow position: | chr24:17078110-17077702 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-532 |
| Cow position: | chr24:17078362-17077925 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 251 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 95-523 |
| Cow position: | chr24:17070443-17070871 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 117-525 |
| Cow position: | chr24:17036621-17036216 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 265 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 40 |
| Conread position: | 193-527 |
| Cow position: | chr24:17013162-17013496 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 148, 134 |
| Conread position: | 263-530 |
| Cow position: | chr24:17013148-17013415 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 58, 63 |
Show alignments to all cow chromosomes.