Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8030K08.5
        

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 70
               

               Conread position:
               3-486
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 155
               

               Conread position:
               4-517
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               4-524
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 320
               

               Conread position:
               5-355
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-516
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-523
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-525
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               119, 92
               

               Conread position:
               5-525
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 69
               

               Conread position:
               5-530
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               401, 427
               

               Conread position:
               6-319
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-394
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               171, 95
               

               Conread position:
               6-448
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-484
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 73
               

               Conread position:
               11-400
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               50, 68
               

               Conread position:
               12-285
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 60
               

               Conread position:
               12-467
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               393, 421
               

               Conread position:
               12-475
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               55, 61
               

               Conread position:
               12-482
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               12-482
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               294
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               307, 316
               

               Conread position:
               12-484
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               299
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               55, 61
               

               Conread position:
               12-484
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 239
               

               Conread position:
               12-485
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               307, 42
               

               Conread position:
               12-494
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               297
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               465, 0
               

               Conread position:
               12-519
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-519
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 42
               

               Conread position:
               12-523
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 120
               

               Conread position:
               12-523
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               324
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               68, 42
               

               Conread position:
               12-524
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-526
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 69
               

               Conread position:
               12-579
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 144
               

               Conread position:
               13-319
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               54, 62
               

               Conread position:
               13-365
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               140, 148
               

               Conread position:
               13-523
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               14-481
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               305, 40
               

               Conread position:
               14-524
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 40
               

               Conread position:
               15-502
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 335
               

               Conread position:
               16-490
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               16-523
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 38
               

               Conread position:
               17-485
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 150
               

               Conread position:
               17-507
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               217, 27
               

               Conread position:
               17-565
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               322
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               18-483
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               200, 137
               

               Conread position:
               18-486
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-525
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 309
               

               Conread position:
               20-538
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 139
               

               Conread position:
               24-524
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 98
               

               Conread position:
               24-530
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               315
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               372, 192
               

               Conread position:
               26-319
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               226, 233
               

               Conread position:
               27-496
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 54
               

               Conread position:
               72-525
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               78-523
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 79
               

               Conread position:
               79-369
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               63, 78
               

               Conread position:
               79-448
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-523
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-524
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               257, 263
               

               Conread position:
               87-521
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               89-406
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               89-521
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               86, 92
               

               Conread position:
               90-489
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               247, 237
               

               Conread position:
               90-523
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               312, 15
               

               Conread position:
               90-524
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               335, 323
               

               Conread position:
               90-525
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 245
               

               Conread position:
               92-467
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               266, 5
               

               Conread position:
               94-315
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               57, 63
               

               Conread position:
               94-414
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               59, 81
               

               Conread position:
               94-519
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               94-523
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               282
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               96-537
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               85, 91
               

               Conread position:
               102-524
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 226
               

               Conread position:
               105-530
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               111-489
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               281, 217
               

               Conread position:
               111-523
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               253
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               122-523
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               199, 206
               

               Conread position:
               124-523
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               173, 178
               

               Conread position:
               135-453
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               141-519
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 186
               

               Conread position:
               146-530
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               33, 37
               

               Conread position:
               180-379
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               141, 145
               

               Conread position:
               189-523
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               31, 43
               

               Conread position:
               189-523
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               215, 243
               

               Conread position:
               190-486
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               192-524
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               144, 150
               

               Conread position:
               193-525
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               194-524
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               213-481
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               95, 112
               

               Conread position:
               265-522
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               141, 97
               
Show alignments to all cow chromosomes.