Cow genome map
Conread name: | Ss1.1-Pig4-TMW8030K08.5 |
Conread position: | 3-382 |
Cow position: | chr25:33127862-33128241 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 70 |
Conread position: | 3-486 |
Cow position: | chr25:34770064-34769581 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 155 |
Conread position: | 4-517 |
Cow position: | chr25:33298540-33299053 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 19 |
Conread position: | 4-524 |
Cow position: | chr25:33299128-33299648 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 315, 320 |
Conread position: | 5-355 |
Cow position: | chr25:23420529-23420879 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 233 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-516 |
Cow position: | chr25:34447084-34447595 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-523 |
Cow position: | chr25:33157327-33156809 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-525 |
Cow position: | chr25:34433667-34434172 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 318 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 119, 92 |
Conread position: | 5-525 |
Cow position: | chr25:34769978-34769458 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 69 |
Conread position: | 5-530 |
Cow position: | chr25:33157411-33156886 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 401, 427 |
Conread position: | 6-319 |
Cow position: | chr25:34769557-34769244 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 214 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-394 |
Cow position: | chr25:33305819-33305434 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 237 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 171, 95 |
Conread position: | 6-448 |
Cow position: | chr25:33127781-33128223 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-484 |
Cow position: | chr25:34713929-34714408 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 290 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 63, 73 |
Conread position: | 11-400 |
Cow position: | chr25:22235897-22236286 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 234 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 50, 68 |
Conread position: | 12-285 |
Cow position: | chr25:326992-327265 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 173 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 42, 60 |
Conread position: | 12-467 |
Cow position: | chr25:33157236-33156782 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 393, 421 |
Conread position: | 12-475 |
Cow position: | chr25:326650-327119 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 293 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 55, 61 |
Conread position: | 12-482 |
Cow position: | chr25:34769635-34769162 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 58 |
Conread position: | 12-482 |
Cow position: | chr25:36801528-36801994 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 294 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 307, 316 |
Conread position: | 12-484 |
Cow position: | chr25:326734-327213 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 299 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 55, 61 |
Conread position: | 12-484 |
Cow position: | chr25:34447259-34447729 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 239 |
Conread position: | 12-485 |
Cow position: | chr25:33306393-33305926 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 295 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 307, 42 |
Conread position: | 12-494 |
Cow position: | chr25:36800868-36801349 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 297 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 465, 0 |
Conread position: | 12-519 |
Cow position: | chr25:33298800-33299307 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-519 |
Cow position: | chr25:33299220-33299727 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 42 |
Conread position: | 12-523 |
Cow position: | chr25:33144918-33145426 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 309, 120 |
Conread position: | 12-523 |
Cow position: | chr25:36801120-36801619 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 324 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 68, 42 |
Conread position: | 12-524 |
Cow position: | chr25:34769803-34769291 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-526 |
Cow position: | chr25:33298884-33299398 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 69 |
Conread position: | 12-579 |
Cow position: | chr25:33299304-33299873 (view UCSC Genome Browser custom track) |
Alignm length: | 575 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 144 |
Conread position: | 13-319 |
Cow position: | chr25:18642185-18641876 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 196 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 54, 62 |
Conread position: | 13-365 |
Cow position: | chr25:33145084-33145436 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 227 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 140, 148 |
Conread position: | 13-523 |
Cow position: | chr25:33298717-33299227 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 65 |
Conread position: | 14-481 |
Cow position: | chr25:33305893-33305431 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 278 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 305, 40 |
Conread position: | 14-524 |
Cow position: | chr25:33298970-33299480 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 40 |
Conread position: | 15-502 |
Cow position: | chr25:34769884-34769397 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 330, 335 |
Conread position: | 16-490 |
Cow position: | chr25:36801448-36801923 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 64 |
Conread position: | 16-523 |
Cow position: | chr25:33127707-33128214 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 38 |
Conread position: | 17-485 |
Cow position: | chr25:36800705-36801173 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 150 |
Conread position: | 17-507 |
Cow position: | chr25:33305972-33305490 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 300 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 217, 27 |
Conread position: | 17-565 |
Cow position: | chr25:34714024-34714575 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 322 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 46, 37 |
Conread position: | 18-483 |
Cow position: | chr25:33305244-33304789 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 286 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 200, 137 |
Conread position: | 18-486 |
Cow position: | chr25:34769713-34769245 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 18-525 |
Cow position: | chr25:34447181-34447688 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 322, 309 |
Conread position: | 20-538 |
Cow position: | chr25:23420376-23420894 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 139 |
Conread position: | 24-524 |
Cow position: | chr25:36801372-36801872 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 98 |
Conread position: | 24-530 |
Cow position: | chr25:33144846-33145349 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 315 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 372, 192 |
Conread position: | 26-319 |
Cow position: | chr25:366724-367017 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 183 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 226, 233 |
Conread position: | 27-496 |
Cow position: | chr25:36800799-36801268 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 54 |
Conread position: | 72-525 |
Cow position: | chr25:34770163-34769710 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 78-523 |
Cow position: | chr25:33157506-33157061 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 79 |
Conread position: | 79-369 |
Cow position: | chr25:326975-327265 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 196 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 63, 78 |
Conread position: | 79-448 |
Cow position: | chr25:33145066-33145435 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 237 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 79-523 |
Cow position: | chr25:33157421-33156977 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 79-524 |
Cow position: | chr25:36801343-36801788 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 280 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 257, 263 |
Conread position: | 87-521 |
Cow position: | chr25:34713842-34714277 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 274 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 26, 35 |
Conread position: | 89-406 |
Cow position: | chr25:414796-414485 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 204 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 89-521 |
Cow position: | chr25:33306069-33305643 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 281 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 86, 92 |
Conread position: | 90-489 |
Cow position: | chr25:22235892-22236291 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 247 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 247, 237 |
Conread position: | 90-523 |
Cow position: | chr25:33305421-33304994 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 285 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 312, 15 |
Conread position: | 90-524 |
Cow position: | chr25:36800526-36800960 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 267 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 335, 323 |
Conread position: | 90-525 |
Cow position: | chr25:34447001-34447436 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 253, 245 |
Conread position: | 92-467 |
Cow position: | chr25:34433506-34433877 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 231 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 266, 5 |
Conread position: | 94-315 |
Cow position: | chr25:34433003-34433224 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 152 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 57, 63 |
Conread position: | 94-414 |
Cow position: | chr25:18642188-18641865 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 206 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 59, 81 |
Conread position: | 94-519 |
Cow position: | chr25:34770057-34769632 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 94-523 |
Cow position: | chr25:23420213-23420627 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 282 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 59, 73 |
Conread position: | 96-537 |
Cow position: | chr25:34713935-34714377 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 271 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 85, 91 |
Conread position: | 102-524 |
Cow position: | chr25:33298470-33298892 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 226 |
Conread position: | 105-530 |
Cow position: | chr25:23420377-23420802 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 111-489 |
Cow position: | chr25:414696-414321 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 232 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 281, 217 |
Conread position: | 111-523 |
Cow position: | chr25:34446938-34447350 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 253 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 122-523 |
Cow position: | chr25:36800642-36801043 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 257 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 199, 206 |
Conread position: | 124-523 |
Cow position: | chr25:346461-346860 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 253 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 173, 178 |
Conread position: | 135-453 |
Cow position: | chr25:326947-327265 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 206 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 29, 19 |
Conread position: | 141-519 |
Cow position: | chr25:23420329-23420707 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 186 |
Conread position: | 146-530 |
Cow position: | chr25:34446889-34447273 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 243 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 33, 37 |
Conread position: | 180-379 |
Cow position: | chr25:34433005-34433204 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 139 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 141, 145 |
Conread position: | 189-523 |
Cow position: | chr25:33157563-33157229 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 203 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 31, 43 |
Conread position: | 189-523 |
Cow position: | chr25:34732614-34732280 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 212 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 215, 243 |
Conread position: | 190-486 |
Cow position: | chr25:346443-346739 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 188 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 192-524 |
Cow position: | chr25:326494-326826 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 209 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 144, 150 |
Conread position: | 193-525 |
Cow position: | chr25:23420228-23420545 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 215 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 45, 56 |
Conread position: | 194-524 |
Cow position: | chr25:366724-367054 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 208 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 213-481 |
Cow position: | chr25:34432954-34433222 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 179 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 95, 112 |
Conread position: | 265-522 |
Cow position: | chr25:34433510-34433764 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 167 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 141, 97 |
Show alignments to all cow chromosomes.