Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8030K08.5
        

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               66, 79
               

               Conread position:
               4-320
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               4-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               305
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               295, 50
               

               Conread position:
               4-525
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               331
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               398, 117
               

               Conread position:
               5-484
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 85
               

               Conread position:
               5-517
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               300
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               316, 323
               

               Conread position:
               6-487
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               289
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               147, 161
               

               Conread position:
               6-491
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               6-528
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               330
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               85, 33
               

               Conread position:
               11-298
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 43
               

               Conread position:
               11-485
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-287
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-368
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               309, 313
               

               Conread position:
               12-379
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 61
               

               Conread position:
               12-463
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               34, 51
               

               Conread position:
               12-466
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 40
               

               Conread position:
               12-485
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 0
               

               Conread position:
               12-485
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 67
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               475, 481
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 58
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 232
               

               Conread position:
               12-530
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               337
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               52, 42
               

               Conread position:
               12-530
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               322
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               132, 152
               

               Conread position:
               12-532
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 41
               

               Conread position:
               12-587
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               13-442
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-485
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 62
               

               Conread position:
               18-483
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 22
               

               Conread position:
               18-519
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 63
               

               Conread position:
               18-523
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               304
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               45, 55
               

               Conread position:
               23-519
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               310
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               24-519
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 127
               

               Conread position:
               26-490
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               281, 295
               

               Conread position:
               72-327
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               72-525
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 17
               

               Conread position:
               78-480
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               49, 10
               

               Conread position:
               83-530
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               260
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               385, 12
               

               Conread position:
               94-485
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               252
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               94-487
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               380, 0
               

               Conread position:
               94-545
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               227, 231
               

               Conread position:
               95-486
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               100-523
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               45, 109
               

               Conread position:
               109-504
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               111-502
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               199, 214
               

               Conread position:
               113-519
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 178
               

               Conread position:
               121-486
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 46
               

               Conread position:
               124-464
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               148, 129
               

               Conread position:
               126-519
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               170-525
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               226, 234
               

               Conread position:
               185-519
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 144
               

               Conread position:
               193-532
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               282, 291
               

               Conread position:
               195-530
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               124, 130
               
Show alignments to all cow chromosomes.