Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8030K08.5
        

               Conread position:
               6-525
               

               Cow position:
               chr29:39627445-39626929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               522
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               471, 189
               

               Conread position:
               13-285
               

               Cow position:
               chr29:39627105-39626833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               50, 60
               

               Conread position:
               13-489
               

               Cow position:
               chr29:39627354-39626880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               303
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               14-368
               

               Cow position:
               chr29:39627188-39626835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               295, 311
               

               Conread position:
               87-525
               

               Cow position:
               chr29:39627532-39627097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               273
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               79, 67
               

               Conread position:
               94-445
               

               Cow position:
               chr29:39627609-39627258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-453
               

               Cow position:
               chr29:39627188-39626833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               223, 227
               

               Conread position:
               165-530
               

               Cow position:
               chr29:39627622-39627257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               312, 327
               

               Conread position:
               628-873
               

               Cow position:
               chr29:5058871-5058627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               46, 17
               
Show alignments to all cow chromosomes.