Cow genome map
Conread name: | Ss1.1-Pig4-TMW8030K08.5 |
Conread position: | 1-318 |
Cow position: | chr7:8325799-8326116 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 212 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 254, 235 |
Conread position: | 1-400 |
Cow position: | chr7:8278326-8278716 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 253 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 152, 126 |
Conread position: | 1-419 |
Cow position: | chr7:1439865-1440282 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 269 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 59, 84 |
Conread position: | 1-484 |
Cow position: | chr7:8325295-8325778 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 150 |
Conread position: | 1-523 |
Cow position: | chr7:8277906-8278428 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 79 |
Conread position: | 1-959 |
Cow position: | chr7:11600961-11600027 (view UCSC Genome Browser custom track) |
Alignm length: | 963 |
Alignm identity: | 833 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 603, 551 |
Conread position: | 3-327 |
Cow position: | chr7:18390474-18390798 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 209 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 316, 322 |
Conread position: | 3-523 |
Cow position: | chr7:1014661-1015183 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 411 |
Conread position: | 5-484 |
Cow position: | chr7:3179843-3180322 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 5-489 |
Cow position: | chr7:18390308-18390793 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 69 |
Conread position: | 5-525 |
Cow position: | chr7:3180095-3180615 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 71 |
Conread position: | 5-529 |
Cow position: | chr7:18390224-18390748 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 68 |
Conread position: | 5-532 |
Cow position: | chr7:8324963-8325489 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 254, 218 |
Conread position: | 6-250 |
Cow position: | chr7:18390561-18390805 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 156 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-388 |
Cow position: | chr7:11434585-11434209 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 251 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 48, 55 |
Conread position: | 6-483 |
Cow position: | chr7:8243533-8244009 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 462, 0 |
Conread position: | 6-484 |
Cow position: | chr7:8243282-8243759 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 307 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 241, 115 |
Conread position: | 6-484 |
Cow position: | chr7:8325552-8326030 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 230 |
Conread position: | 6-486 |
Cow position: | chr7:8242862-8243342 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 301 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 74, 67 |
Conread position: | 6-486 |
Cow position: | chr7:8243030-8243509 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 303 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 253, 224 |
Conread position: | 6-486 |
Cow position: | chr7:8277323-8277803 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 309 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 85, 70 |
Conread position: | 6-486 |
Cow position: | chr7:8324880-8325360 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 69 |
Conread position: | 6-486 |
Cow position: | chr7:8325636-8326116 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 259, 230 |
Conread position: | 6-488 |
Cow position: | chr7:8277575-8278057 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 153 |
Conread position: | 6-503 |
Cow position: | chr7:1014918-1015415 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-505 |
Cow position: | chr7:8243617-8244113 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 158 |
Conread position: | 6-519 |
Cow position: | chr7:8243449-8243962 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 319 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 145, 169 |
Conread position: | 6-524 |
Cow position: | chr7:3180348-3180865 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 178 |
Conread position: | 6-525 |
Cow position: | chr7:1014834-1015353 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 375, 382 |
Conread position: | 6-530 |
Cow position: | chr7:42879213-42878689 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 72 |
Conread position: | 6-559 |
Cow position: | chr7:42878793-42878240 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 315, 328 |
Conread position: | 6-607 |
Cow position: | chr7:8277659-8278267 (view UCSC Genome Browser custom track) |
Alignm length: | 616 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 235, 258 |
Conread position: | 7-442 |
Cow position: | chr7:11434668-11434240 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 286 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 230, 139 |
Conread position: | 11-462 |
Cow position: | chr7:8278000-8278451 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 291 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 56, 68 |
Conread position: | 11-607 |
Cow position: | chr7:11601119-11600516 (view UCSC Genome Browser custom track) |
Alignm length: | 605 |
Alignm identity: | 427 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 523, 518 |
Conread position: | 12-403 |
Cow position: | chr7:1015092-1015485 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 256 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 367, 0 |
Conread position: | 12-485 |
Cow position: | chr7:42879039-42878566 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 384, 415 |
Conread position: | 12-486 |
Cow position: | chr7:8325138-8325612 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 161 |
Conread position: | 12-489 |
Cow position: | chr7:1439793-1440269 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 301 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 311, 68 |
Conread position: | 12-523 |
Cow position: | chr7:18390147-18390658 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 110 |
Conread position: | 12-525 |
Cow position: | chr7:3179934-3180447 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-525 |
Cow position: | chr7:3180186-3180699 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 69 |
Conread position: | 12-525 |
Cow position: | chr7:3180270-3180783 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 392, 400 |
Conread position: | 12-525 |
Cow position: | chr7:11601202-11600689 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 12-525 |
Cow position: | chr7:42878955-42878442 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 71 |
Conread position: | 12-525 |
Cow position: | chr7:42879123-42878610 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 69 |
Conread position: | 12-532 |
Cow position: | chr7:3179766-3180285 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 309, 314 |
Conread position: | 13-465 |
Cow position: | chr7:1015009-1015460 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 312 |
Conread position: | 14-523 |
Cow position: | chr7:1014260-1014763 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 314 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 55, 82 |
Conread position: | 14-525 |
Cow position: | chr7:1439712-1440220 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 57 |
Conread position: | 16-525 |
Cow position: | chr7:42879371-42878862 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 24 |
Conread position: | 18-446 |
Cow position: | chr7:8325732-8326163 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 269 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 241, 226 |
Conread position: | 18-483 |
Cow position: | chr7:8278091-8278555 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 74 |
Conread position: | 18-484 |
Cow position: | chr7:8325228-8325694 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 157 |
Conread position: | 18-486 |
Cow position: | chr7:1014348-1014810 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 281 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 310, 0 |
Conread position: | 19-523 |
Cow position: | chr7:11434824-11434327 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 312 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 107, 100 |
Conread position: | 63-525 |
Cow position: | chr7:3179733-3180195 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 79-496 |
Cow position: | chr7:1438301-1438718 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 255 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 72, 81 |
Conread position: | 90-486 |
Cow position: | chr7:18390141-18390537 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 343 |
Conread position: | 94-489 |
Cow position: | chr7:1439453-1439850 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 256 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 228, 133 |
Conread position: | 94-607 |
Cow position: | chr7:11601204-11600684 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 339 |
Conread position: | 95-466 |
Cow position: | chr7:1014257-1014628 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 237 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 113-525 |
Cow position: | chr7:8324735-8325147 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 42 |
Conread position: | 120-525 |
Cow position: | chr7:1014114-1014519 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 251 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 109, 97 |
Conread position: | 122-523 |
Cow position: | chr7:18390005-18390406 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 257 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 43, 32 |
Conread position: | 126-525 |
Cow position: | chr7:3179712-3180111 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 349, 368 |
Conread position: | 174-604 |
Cow position: | chr7:18390141-18390578 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 360, 351 |
Conread position: | 180-530 |
Cow position: | chr7:11601202-11600852 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 187-525 |
Cow position: | chr7:18389986-18390324 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 204 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 302, 306 |
Conread position: | 189-524 |
Cow position: | chr7:1014267-1014602 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 216 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 192-607 |
Cow position: | chr7:8324730-8325152 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 275 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 73, 45 |
Conread position: | 203-525 |
Cow position: | chr7:3179705-3180027 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 218 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 210, 203 |
Conread position: | 264-526 |
Cow position: | chr7:8244191-8244455 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 168 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 201, 0 |
Conread position: | 275-505 |
Cow position: | chr7:8324729-8324958 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 155 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 206, 220 |
Conread position: | 363-487 |
Cow position: | chr7:11434970-11434846 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 95 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.