Cow genome map

Conread name: Ss1.1-Pig4-TMW8030K08.5

Conread position: 1-318
Cow position: chr7:8325799-8326116 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 254, 235

Conread position: 1-400
Cow position: chr7:8278326-8278716 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 253
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 152, 126

Conread position: 1-419
Cow position: chr7:1439865-1440282 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 269
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 59, 84

Conread position: 1-484
Cow position: chr7:8325295-8325778 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 150

Conread position: 1-523
Cow position: chr7:8277906-8278428 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 79

Conread position: 1-959
Cow position: chr7:11600961-11600027 (view UCSC Genome Browser custom track)
Alignm length: 963
Alignm identity: 833
Alignm E-value: 0
Alignm gaps (pig, cow): 603, 551

Conread position: 3-327
Cow position: chr7:18390474-18390798 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 316, 322

Conread position: 3-523
Cow position: chr7:1014661-1015183 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 411

Conread position: 5-484
Cow position: chr7:3179843-3180322 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 5-489
Cow position: chr7:18390308-18390793 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 69

Conread position: 5-525
Cow position: chr7:3180095-3180615 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 71

Conread position: 5-529
Cow position: chr7:18390224-18390748 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 68

Conread position: 5-532
Cow position: chr7:8324963-8325489 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 218

Conread position: 6-250
Cow position: chr7:18390561-18390805 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 6-388
Cow position: chr7:11434585-11434209 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 251
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 48, 55

Conread position: 6-483
Cow position: chr7:8243533-8244009 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 0

Conread position: 6-484
Cow position: chr7:8243282-8243759 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 307
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 241, 115

Conread position: 6-484
Cow position: chr7:8325552-8326030 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 230

Conread position: 6-486
Cow position: chr7:8242862-8243342 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 301
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 74, 67

Conread position: 6-486
Cow position: chr7:8243030-8243509 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 303
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 253, 224

Conread position: 6-486
Cow position: chr7:8277323-8277803 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 309
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 85, 70

Conread position: 6-486
Cow position: chr7:8324880-8325360 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 69

Conread position: 6-486
Cow position: chr7:8325636-8326116 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 230

Conread position: 6-488
Cow position: chr7:8277575-8278057 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 153

Conread position: 6-503
Cow position: chr7:1014918-1015415 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-505
Cow position: chr7:8243617-8244113 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 158

Conread position: 6-519
Cow position: chr7:8243449-8243962 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 319
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 145, 169

Conread position: 6-524
Cow position: chr7:3180348-3180865 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 178

Conread position: 6-525
Cow position: chr7:1014834-1015353 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 382

Conread position: 6-530
Cow position: chr7:42879213-42878689 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 72

Conread position: 6-559
Cow position: chr7:42878793-42878240 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 328

Conread position: 6-607
Cow position: chr7:8277659-8278267 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 258

Conread position: 7-442
Cow position: chr7:11434668-11434240 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 286
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 230, 139

Conread position: 11-462
Cow position: chr7:8278000-8278451 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 291
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 56, 68

Conread position: 11-607
Cow position: chr7:11601119-11600516 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 523, 518

Conread position: 12-403
Cow position: chr7:1015092-1015485 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 256
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 367, 0

Conread position: 12-485
Cow position: chr7:42879039-42878566 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 415

Conread position: 12-486
Cow position: chr7:8325138-8325612 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 161

Conread position: 12-489
Cow position: chr7:1439793-1440269 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 301
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 311, 68

Conread position: 12-523
Cow position: chr7:18390147-18390658 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 110

Conread position: 12-525
Cow position: chr7:3179934-3180447 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-525
Cow position: chr7:3180186-3180699 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 69

Conread position: 12-525
Cow position: chr7:3180270-3180783 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 400

Conread position: 12-525
Cow position: chr7:11601202-11600689 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 12-525
Cow position: chr7:42878955-42878442 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 71

Conread position: 12-525
Cow position: chr7:42879123-42878610 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 69

Conread position: 12-532
Cow position: chr7:3179766-3180285 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 314

Conread position: 13-465
Cow position: chr7:1015009-1015460 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 312

Conread position: 14-523
Cow position: chr7:1014260-1014763 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 314
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 55, 82

Conread position: 14-525
Cow position: chr7:1439712-1440220 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 57

Conread position: 16-525
Cow position: chr7:42879371-42878862 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 24

Conread position: 18-446
Cow position: chr7:8325732-8326163 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 269
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 241, 226

Conread position: 18-483
Cow position: chr7:8278091-8278555 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 74

Conread position: 18-484
Cow position: chr7:8325228-8325694 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 157

Conread position: 18-486
Cow position: chr7:1014348-1014810 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 281
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 310, 0

Conread position: 19-523
Cow position: chr7:11434824-11434327 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 312
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 107, 100

Conread position: 63-525
Cow position: chr7:3179733-3180195 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 79-496
Cow position: chr7:1438301-1438718 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 255
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 81

Conread position: 90-486
Cow position: chr7:18390141-18390537 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 343

Conread position: 94-489
Cow position: chr7:1439453-1439850 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 256
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 228, 133

Conread position: 94-607
Cow position: chr7:11601204-11600684 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 339

Conread position: 95-466
Cow position: chr7:1014257-1014628 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 237
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 113-525
Cow position: chr7:8324735-8325147 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 42

Conread position: 120-525
Cow position: chr7:1014114-1014519 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 251
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 109, 97

Conread position: 122-523
Cow position: chr7:18390005-18390406 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 257
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 43, 32

Conread position: 126-525
Cow position: chr7:3179712-3180111 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 368

Conread position: 174-604
Cow position: chr7:18390141-18390578 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 351

Conread position: 180-530
Cow position: chr7:11601202-11600852 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 187-525
Cow position: chr7:18389986-18390324 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 204
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 302, 306

Conread position: 189-524
Cow position: chr7:1014267-1014602 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 216
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 192-607
Cow position: chr7:8324730-8325152 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 275
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 45

Conread position: 203-525
Cow position: chr7:3179705-3180027 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 210, 203

Conread position: 264-526
Cow position: chr7:8244191-8244455 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 168
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 201, 0

Conread position: 275-505
Cow position: chr7:8324729-8324958 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 206, 220

Conread position: 363-487
Cow position: chr7:11434970-11434846 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.