Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8030K08.5
        

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               254, 235
               

               Conread position:
               1-400
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               152, 126
               

               Conread position:
               1-419
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 150
               

               Conread position:
               1-523
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 79
               

               Conread position:
               1-959
               

               Cow position:
               
               

               Alignm length:
               963
               

               Alignm identity:
               833
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               603, 551
               

               Conread position:
               3-327
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               316, 322
               

               Conread position:
               3-523
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 411
               

               Conread position:
               5-484
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-489
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 69
               

               Conread position:
               5-525
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 71
               

               Conread position:
               5-529
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 68
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 218
               

               Conread position:
               6-250
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-388
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               48, 55
               

               Conread position:
               6-483
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               462, 0
               

               Conread position:
               6-484
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               307
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               241, 115
               

               Conread position:
               6-484
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 230
               

               Conread position:
               6-486
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               301
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               74, 67
               

               Conread position:
               6-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               303
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               253, 224
               

               Conread position:
               6-486
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               309
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               85, 70
               

               Conread position:
               6-486
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               6-486
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 230
               

               Conread position:
               6-488
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 153
               

               Conread position:
               6-503
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-505
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 158
               

               Conread position:
               6-519
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               319
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               145, 169
               

               Conread position:
               6-524
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 178
               

               Conread position:
               6-525
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               375, 382
               

               Conread position:
               6-530
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 72
               

               Conread position:
               6-559
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 328
               

               Conread position:
               6-607
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 258
               

               Conread position:
               7-442
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               286
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               230, 139
               

               Conread position:
               11-462
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               291
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               56, 68
               

               Conread position:
               11-607
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               523, 518
               

               Conread position:
               12-403
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               256
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               367, 0
               

               Conread position:
               12-485
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               384, 415
               

               Conread position:
               12-486
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 161
               

               Conread position:
               12-489
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               301
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               311, 68
               

               Conread position:
               12-523
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 110
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 69
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               392, 400
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 71
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 69
               

               Conread position:
               12-532
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 314
               

               Conread position:
               13-465
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 312
               

               Conread position:
               14-523
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               55, 82
               

               Conread position:
               14-525
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 57
               

               Conread position:
               16-525
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 24
               

               Conread position:
               18-446
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               241, 226
               

               Conread position:
               18-483
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 74
               

               Conread position:
               18-484
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 157
               

               Conread position:
               18-486
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               310, 0
               

               Conread position:
               19-523
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               312
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               107, 100
               

               Conread position:
               63-525
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               79-496
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               72, 81
               

               Conread position:
               90-486
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 343
               

               Conread position:
               94-489
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               228, 133
               

               Conread position:
               94-607
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 339
               

               Conread position:
               95-466
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               113-525
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               120-525
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               109, 97
               

               Conread position:
               122-523
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               43, 32
               

               Conread position:
               126-525
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               349, 368
               

               Conread position:
               174-604
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               360, 351
               

               Conread position:
               180-530
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               187-525
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               302, 306
               

               Conread position:
               189-524
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               192-607
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               73, 45
               

               Conread position:
               203-525
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               210, 203
               

               Conread position:
               264-526
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               275-505
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               206, 220
               

               Conread position:
               363-487
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.