Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8030K08.5
        

               Conread position:
               1-398
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               253
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-530
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-486
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 74
               

               Conread position:
               4-523
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 69
               

               Conread position:
               4-525
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 81
               

               Conread position:
               4-526
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-484
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 114
               

               Conread position:
               6-326
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               160, 148
               

               Conread position:
               6-486
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 116
               

               Conread position:
               6-486
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 48
               

               Conread position:
               6-487
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 48
               

               Conread position:
               6-525
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 90
               

               Conread position:
               6-530
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 322
               

               Conread position:
               6-532
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               334
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               12-461
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               287
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               12-465
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               282
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               12-467
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 84
               

               Conread position:
               12-482
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-487
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 66
               

               Conread position:
               12-502
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 313
               

               Conread position:
               12-519
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 57
               

               Conread position:
               12-523
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               401, 407
               

               Conread position:
               12-523
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               487, 476
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 322
               

               Conread position:
               12-525
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               322
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               128, 171
               

               Conread position:
               12-532
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               373, 400
               

               Conread position:
               12-532
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 136
               

               Conread position:
               13-523
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               13-525
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 41
               

               Conread position:
               13-534
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 60
               

               Conread position:
               14-439
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               256
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               49, 59
               

               Conread position:
               14-484
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 9
               

               Conread position:
               14-487
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               300
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               53, 67
               

               Conread position:
               14-525
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 59
               

               Conread position:
               14-528
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 59
               

               Conread position:
               17-403
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 49
               

               Conread position:
               17-488
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 37
               

               Conread position:
               17-525
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 66
               

               Conread position:
               26-525
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 45
               

               Conread position:
               62-603
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               351
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               87-486
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 8
               

               Conread position:
               87-530
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               21, 400
               

               Conread position:
               93-532
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 69
               

               Conread position:
               96-523
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               240, 85
               

               Conread position:
               98-480
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               292, 226
               

               Conread position:
               102-530
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 322
               

               Conread position:
               109-484
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               135-478
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               270, 283
               

               Conread position:
               216-444
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               105, 109
               

               Conread position:
               260-523
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.