Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8031D08.3 |
| Conread position: | 1-157 |
| Cow position: | chr19:22706193-22706037 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-162 |
| Cow position: | chr19:2417708-2417547 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-162 |
| Cow position: | chr19:2443903-2443742 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-162 |
| Cow position: | chr19:22475632-22475471 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-162 |
| Cow position: | chr19:22522745-22522584 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 151-283 |
| Cow position: | chr19:22705780-22705649 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 278-592 |
| Cow position: | chr19:22705181-22704867 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 281-560 |
| Cow position: | chr19:2416942-2416663 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 281-560 |
| Cow position: | chr19:2443358-2443079 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 281-592 |
| Cow position: | chr19:22474114-22473803 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 281-592 |
| Cow position: | chr19:22522100-22521789 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 590-795 |
| Cow position: | chr19:2416547-2416342 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 590-795 |
| Cow position: | chr19:2442963-2442758 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 590-795 |
| Cow position: | chr19:22521153-22520948 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 590-795 |
| Cow position: | chr19:22704753-22704548 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 590-809 |
| Cow position: | chr19:22473168-22472950 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 780-922 |
| Cow position: | chr19:22704489-22704347 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 127 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 792-936 |
| Cow position: | chr19:2416016-2415873 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 793-936 |
| Cow position: | chr19:2442226-2442084 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 793-936 |
| Cow position: | chr19:22519699-22519557 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 922-1086 |
| Cow position: | chr19:22703524-22703360 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 922-1091 |
| Cow position: | chr19:2415797-2415628 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 922-1091 |
| Cow position: | chr19:2442008-2441839 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 922-1091 |
| Cow position: | chr19:22471587-22471418 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 922-1091 |
| Cow position: | chr19:22519481-22519312 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1088-1214 |
| Cow position: | chr19:22703263-22703141 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1186-1294 |
| Cow position: | chr19:22470587-22470480 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1196-1294 |
| Cow position: | chr19:22702997-22702899 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1294-1421 |
| Cow position: | chr19:2413075-2412947 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 1294-1421 |
| Cow position: | chr19:2440161-2440033 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 1294-1421 |
| Cow position: | chr19:22469162-22469034 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 1294-1421 |
| Cow position: | chr19:22517853-22517725 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 1294-1446 |
| Cow position: | chr19:22702805-22702653 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 150 |
| Conread position: | 1428-1571 |
| Cow position: | chr19:22701948-22701805 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 132 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 96, 35 |
Show alignments to all cow chromosomes.