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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8031H19.3
        

               
Conread position:
               
270-701
               

               
Cow position:
               
chr10:53925898-53925475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
339-728
               

               
Cow position:
               
chr10:24863735-24864144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 209
               

               
Conread position:
               
340-724
               

               
Cow position:
               
chr10:36916334-36916716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
343-722
               

               
Cow position:
               
chr10:62721014-62721385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
347-626
               

               
Cow position:
               
chr10:63654200-63653916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 192
               

               
Conread position:
               
347-694
               

               
Cow position:
               
chr10:45709302-45709642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 16
               

               
Conread position:
               
347-732
               

               
Cow position:
               
chr10:7880334-7880720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 36
               

               
Conread position:
               
351-720
               

               
Cow position:
               
chr10:5361757-5361388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
353-732
               

               
Cow position:
               
chr10:48028595-48028224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 197
               

               
Conread position:
               
356-732
               

               
Cow position:
               
chr10:6473702-6473345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
287, 40
               

               
Conread position:
               
357-732
               

               
Cow position:
               
chr10:27173305-27173680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 36
               

               
Conread position:
               
359-655
               

               
Cow position:
               
chr10:57162462-57162756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
20, 182
               

               
Conread position:
               
359-710
               

               
Cow position:
               
chr10:36583156-36583484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
182, 11
               

               
Conread position:
               
359-718
               

               
Cow position:
               
chr10:54713-54363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
359-725
               

               
Cow position:
               
chr10:52567174-52567536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
359-729
               

               
Cow position:
               
chr10:33594636-33595011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 198
               

               
Conread position:
               
359-729
               

               
Cow position:
               
chr10:53104514-53104894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
359-732
               

               
Cow position:
               
chr10:43564023-43564397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
82, 161
               

               
Conread position:
               
359-732
               

               
Cow position:
               
chr10:49184161-49184526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
360-493
               

               
Cow position:
               
chr10:7437061-7437195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
361-713
               

               
Cow position:
               
chr10:22454406-22454757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 31
               

               
Conread position:
               
362-603
               

               
Cow position:
               
chr10:15352489-15352246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
362-732
               

               
Cow position:
               
chr10:46669152-46668771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
364-717
               

               
Cow position:
               
chr10:16628531-16628885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 58
               

               
Conread position:
               
364-721
               

               
Cow position:
               
chr10:2230389-2230751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 174
               

               
Conread position:
               
364-726
               

               
Cow position:
               
chr10:38832959-38832592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 177
               

               
Conread position:
               
364-732
               

               
Cow position:
               
chr10:51715212-51714848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
365-713
               

               
Cow position:
               
chr10:7477179-7477533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 149
               

               
Conread position:
               
365-721
               

               
Cow position:
               
chr10:49562070-49562419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 69
               

               
Conread position:
               
365-729
               

               
Cow position:
               
chr10:51724251-51723899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
366-711
               

               
Cow position:
               
chr10:35472173-35472524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
367-732
               

               
Cow position:
               
chr10:9068242-9067884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
367-732
               

               
Cow position:
               
chr10:57295094-57295460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
11, 170
               

               
Conread position:
               
368-718
               

               
Cow position:
               
chr10:20200147-20200498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
370-599
               

               
Cow position:
               
chr10:1768581-1768808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
370-730
               

               
Cow position:
               
chr10:54525492-54525131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
370-732
               

               
Cow position:
               
chr10:17132590-17132216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
24, 148
               

               
Conread position:
               
371-523
               

               
Cow position:
               
chr10:51088470-51088310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
371-529
               

               
Cow position:
               
chr10:6069347-6069179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
371-585
               

               
Cow position:
               
chr10:68941259-68941480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 173
               

               
Conread position:
               
371-624
               

               
Cow position:
               
chr10:42501706-42501955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
371-693
               

               
Cow position:
               
chr10:53177001-53177324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 20
               

               
Conread position:
               
371-709
               

               
Cow position:
               
chr10:34361292-34360956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
371-724
               

               
Cow position:
               
chr10:52099600-52099239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
371-726
               

               
Cow position:
               
chr10:30301669-30301310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
372-710
               

               
Cow position:
               
chr10:54974630-54974970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
372-728
               

               
Cow position:
               
chr10:61243823-61244169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
47, 89
               

               
Conread position:
               
373-644
               

               
Cow position:
               
chr10:860959-861236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
373-725
               

               
Cow position:
               
chr10:15830457-15830806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
119, 21
               

               
Conread position:
               
374-640
               

               
Cow position:
               
chr10:3665176-3664917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
374-724
               

               
Cow position:
               
chr10:4402933-4402580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
374-725
               

               
Cow position:
               
chr10:22287295-22286953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
374-725
               

               
Cow position:
               
chr10:54801849-54802186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
375-720
               

               
Cow position:
               
chr10:27571570-27571235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
378-732
               

               
Cow position:
               
chr10:963626-963290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
268, 24
               

               
Conread position:
               
380-724
               

               
Cow position:
               
chr10:51103273-51102938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
381-727
               

               
Cow position:
               
chr10:49369772-49370101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
85, 25
               

               
Conread position:
               
382-722
               

               
Cow position:
               
chr10:10687658-10687335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
263, 83
               

               
Conread position:
               
382-728
               

               
Cow position:
               
chr10:54766294-54766627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
383-618
               

               
Cow position:
               
chr10:14291250-14291490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 154
               

               
Conread position:
               
383-640
               

               
Cow position:
               
chr10:23447017-23447282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
383-650
               

               
Cow position:
               
chr10:27342512-27342246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
121, 96
               

               
Conread position:
               
383-708
               

               
Cow position:
               
chr10:53654843-53655168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 37
               

               
Conread position:
               
383-718
               

               
Cow position:
               
chr10:34560461-34560790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
116, 61
               

               
Conread position:
               
383-728
               

               
Cow position:
               
chr10:11521726-11521389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
383-728
               

               
Cow position:
               
chr10:40707896-40707562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
259, 87
               

               
Conread position:
               
383-732
               

               
Cow position:
               
chr10:6625658-6625307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
95, 45
               

               
Conread position:
               
383-732
               

               
Cow position:
               
chr10:7835063-7834727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
383-732
               

               
Cow position:
               
chr10:8855320-8855660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
383-732
               

               
Cow position:
               
chr10:10514994-10515337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 157
               

               
Conread position:
               
383-732
               

               
Cow position:
               
chr10:14306746-14307103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
5, 154
               

               
Conread position:
               
383-732
               

               
Cow position:
               
chr10:14320647-14321004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
5, 154
               

               
Conread position:
               
383-732
               

               
Cow position:
               
chr10:17100774-17100441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
146, 59
               

               
Conread position:
               
383-732
               

               
Cow position:
               
chr10:49349460-49349103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
50, 58
               

               
Conread position:
               
384-644
               

               
Cow position:
               
chr10:49659291-49659537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
384-732
               

               
Cow position:
               
chr10:5742316-5741970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
386-732
               

               
Cow position:
               
chr10:51618712-51619053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
118, 104
               

               
Conread position:
               
387-584
               

               
Cow position:
               
chr10:68887130-68886933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
387-595
               

               
Cow position:
               
chr10:36232173-36232381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
106, 82
               

               
Conread position:
               
387-614
               

               
Cow position:
               
chr10:58086796-58086566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
109, 162
               

               
Conread position:
               
387-640
               

               
Cow position:
               
chr10:35768708-35768969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
387-657
               

               
Cow position:
               
chr10:33027073-33027328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
117, 32
               

               
Conread position:
               
387-715
               

               
Cow position:
               
chr10:10530358-10530686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
387-724
               

               
Cow position:
               
chr10:54825862-54826190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
387-726
               

               
Cow position:
               
chr10:28981701-28982023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 57
               

               
Conread position:
               
387-726
               

               
Cow position:
               
chr10:53394994-53395336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 133
               

               
Conread position:
               
387-728
               

               
Cow position:
               
chr10:12158711-12159053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 80
               

               
Conread position:
               
387-728
               

               
Cow position:
               
chr10:22529934-22530270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 96
               

               
Conread position:
               
387-728
               

               
Cow position:
               
chr10:50552236-50552568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
387-729
               

               
Cow position:
               
chr10:7892438-7892102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
121, 81
               

               
Conread position:
               
387-729
               

               
Cow position:
               
chr10:55376438-55376108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
33, 144
               

               
Conread position:
               
387-730
               

               
Cow position:
               
chr10:9045715-9045374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 144
               

               
Conread position:
               
387-730
               

               
Cow position:
               
chr10:10425434-10425096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
104, 152
               

               
Conread position:
               
387-732
               

               
Cow position:
               
chr10:5639956-5640302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 150
               

               
Conread position:
               
387-732
               

               
Cow position:
               
chr10:55417463-55417823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
387-732
               

               
Cow position:
               
chr10:55581351-55581686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 40
               

               
Conread position:
               
387-732
               

               
Cow position:
               
chr10:65689547-65689196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
93, 130
               

               
Conread position:
               
388-614
               

               
Cow position:
               
chr10:25950537-25950767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
103, 165
               

               
Conread position:
               
388-732
               

               
Cow position:
               
chr10:23101186-23101521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
390-548
               

               
Cow position:
               
chr10:24668572-24668414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
116, 12
               

               
Conread position:
               
390-642
               

               
Cow position:
               
chr10:46801722-46801972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
390-643
               

               
Cow position:
               
chr10:35117995-35117743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
130, 117
               

               
Conread position:
               
390-720
               

               
Cow position:
               
chr10:25370393-25370064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
210, 88
               

               
Conread position:
               
390-726
               

               
Cow position:
               
chr10:58029535-58029856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
119, 163
               

               
Conread position:
               
390-732
               

               
Cow position:
               
chr10:45266797-45267142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
52, 5
               

               
Conread position:
               
390-732
               

               
Cow position:
               
chr10:49910218-49910551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
178, 80
               

               
Conread position:
               
390-732
               

               
Cow position:
               
chr10:58705608-58705946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
390-732
               

               
Cow position:
               
chr10:69253422-69253080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
101, 78
               

               
Conread position:
               
391-602
               

               
Cow position:
               
chr10:57371926-57371713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
103, 158
               

               
Conread position:
               
391-602
               

               
Cow position:
               
chr10:57421223-57421010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
103, 158
               

               
Conread position:
               
391-730
               

               
Cow position:
               
chr10:55201054-55200709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
391-732
               

               
Cow position:
               
chr10:46064912-46064581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 29
               

               
Conread position:
               
392-729
               

               
Cow position:
               
chr10:29768368-29768693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
74, 88
               

               
Conread position:
               
395-595
               

               
Cow position:
               
chr10:14335721-14335921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
139, 114
               

               
Conread position:
               
395-728
               

               
Cow position:
               
chr10:10493118-10493446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
197, 88
               

               
Conread position:
               
395-732
               

               
Cow position:
               
chr10:31741218-31740872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
396-726
               

               
Cow position:
               
chr10:29823363-29823697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
113, 142
               

               
Conread position:
               
397-507
               

               
Cow position:
               
chr10:16024346-16024236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
398-729
               

               
Cow position:
               
chr10:59408002-59407645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
20, 325
               

               
Conread position:
               
402-710
               

               
Cow position:
               
chr10:8333489-8333181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
91, 140
               

               
Conread position:
               
404-725
               

               
Cow position:
               
chr10:52609927-52609610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
405-655
               

               
Cow position:
               
chr10:56625679-56625929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
405-722
               

               
Cow position:
               
chr10:5387923-5388229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
146, 31
               

               
Conread position:
               
405-723
               

               
Cow position:
               
chr10:29185785-29185469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 79
               

               
Conread position:
               
405-728
               

               
Cow position:
               
chr10:31736234-31735915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
405-732
               

               
Cow position:
               
chr10:30236751-30236419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
90, 191
               

               
Conread position:
               
405-732
               

               
Cow position:
               
chr10:41230885-41230562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
405-732
               

               
Cow position:
               
chr10:45507386-45507707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 48
               

               
Conread position:
               
408-732
               

               
Cow position:
               
chr10:54401304-54400982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
111, 69
               

               
Conread position:
               
409-721
               

               
Cow position:
               
chr10:25875734-25875425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
410-725
               

               
Cow position:
               
chr10:16081984-16081646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 70
               

               
Conread position:
               
412-696
               

               
Cow position:
               
chr10:60719768-60719480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
412-729
               

               
Cow position:
               
chr10:1340530-1340208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
114, 144
               

               
Conread position:
               
421-722
               

               
Cow position:
               
chr10:23918398-23918705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
70, 115
               

               
Conread position:
               
421-732
               

               
Cow position:
               
chr10:45955130-45954826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
422-723
               

               
Cow position:
               
chr10:28051322-28051624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 62
               

               
Conread position:
               
423-732
               

               
Cow position:
               
chr10:28460932-28460617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
424-724
               

               
Cow position:
               
chr10:7475975-7476274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
427-729
               

               
Cow position:
               
chr10:8829505-8829803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
82, 107
               

               
Conread position:
               
430-677
               

               
Cow position:
               
chr10:25474715-25474481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
434-729
               

               
Cow position:
               
chr10:626258-625963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 78
               

               
Conread position:
               
434-732
               

               
Cow position:
               
chr10:35476656-35476960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
436-720
               

               
Cow position:
               
chr10:53619881-53619609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
436-729
               

               
Cow position:
               
chr10:8243097-8243388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
436-730
               

               
Cow position:
               
chr10:57092069-57091772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
71, 92
               

               
Conread position:
               
437-725
               

               
Cow position:
               
chr10:64563175-64562883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 5
               

               
Conread position:
               
439-732
               

               
Cow position:
               
chr10:8729444-8729144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
445-730
               

               
Cow position:
               
chr10:9655938-9655663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
127, 23
               

               
Conread position:
               
454-732
               

               
Cow position:
               
chr10:24544687-24544399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
461-724
               

               
Cow position:
               
chr10:6907078-6906810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
470-728
               

               
Cow position:
               
chr10:20745132-20744877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
474-717
               

               
Cow position:
               
chr10:54124128-54123890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
163, 38
               

               
Conread position:
               
476-732
               

               
Cow position:
               
chr10:53182720-53182453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
478-713
               

               
Cow position:
               
chr10:40739258-40739022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 60
               

               
Conread position:
               
483-727
               

               
Cow position:
               
chr10:50163543-50163311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
163, 6
               

               
Conread position:
               
503-727
               

               
Cow position:
               
chr10:52767454-52767667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
143, 43
               

               
Conread position:
               
503-732
               

               
Cow position:
               
chr10:30101321-30101550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
504-702
               

               
Cow position:
               
chr10:10412570-10412373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
505-698
               

               
Cow position:
               
chr10:17142303-17142110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
508-732
               

               
Cow position:
               
chr10:58165641-58165856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
134, 18
               

               
Conread position:
               
510-701
               

               
Cow position:
               
chr10:1935461-1935648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
136, 28
               

               
Conread position:
               
523-728
               

               
Cow position:
               
chr10:55804340-55804549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
541-725
               

               
Cow position:
               
chr10:64119410-64119228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
541-726
               

               
Cow position:
               
chr10:27094093-27094276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
541-732
               

               
Cow position:
               
chr10:30438579-30438771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
543-732
               

               
Cow position:
               
chr10:22979588-22979772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
544-725
               

               
Cow position:
               
chr10:30554466-30554286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
545-732
               

               
Cow position:
               
chr10:23454859-23455044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
546-724
               

               
Cow position:
               
chr10:10153444-10153265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
546-728
               

               
Cow position:
               
chr10:6272156-6271972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
547-725
               

               
Cow position:
               
chr10:25911564-25911386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
548-729
               

               
Cow position:
               
chr10:34755973-34755792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
550-723
               

               
Cow position:
               
chr10:4019722-4019550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 114
               

               
Conread position:
               
554-724
               

               
Cow position:
               
chr10:25903508-25903339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
89, 114
               

               
Conread position:
               
554-729
               

               
Cow position:
               
chr10:43342667-43342844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
557-722
               

               
Cow position:
               
chr10:25645531-25645694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 113
               

               
Conread position:
               
557-725
               

               
Cow position:
               
chr10:60486153-60485986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
558-732
               

               
Cow position:
               
chr10:13162193-13162364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 111
               

               
Conread position:
               
562-728
               

               
Cow position:
               
chr10:34181635-34181799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
565-730
               

               
Cow position:
               
chr10:78968-79135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
565-732
               

               
Cow position:
               
chr10:36582275-36582446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
568-724
               

               
Cow position:
               
chr10:11392618-11392462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
78, 19
               

               
Conread position:
               
571-700
               

               
Cow position:
               
chr10:53792182-53792312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
574-725
               

               
Cow position:
               
chr10:1387536-1387385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
575-728
               

               
Cow position:
               
chr10:8839235-8839082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
71, 136
               

               
Conread position:
               
576-723
               

               
Cow position:
               
chr10:36233745-36233599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
577-724
               

               
Cow position:
               
chr10:30728739-30728590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
580-729
               

               
Cow position:
               
chr10:62041388-62041537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 137
               

               
Conread position:
               
582-727
               

               
Cow position:
               
chr10:56604441-56604301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
590-732
               

               
Cow position:
               
chr10:30377818-30377958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
599-732
               

               
Cow position:
               
chr10:55077864-55077731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
606-732
               

               
Cow position:
               
chr10:12146789-12146662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
609-723
               

               
Cow position:
               
chr10:68886927-68886812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               
Show alignments to all cow chromosomes.