Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8031H19.3 |
| Conread position: | 271-697 |
| Cow position: | chr11:75331619-75332062 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 68 |
| Conread position: | 321-597 |
| Cow position: | chr11:81778419-81778697 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 50 |
| Conread position: | 330-701 |
| Cow position: | chr11:55840044-55839658 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 336-705 |
| Cow position: | chr11:73893495-73893869 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 153, 115 |
| Conread position: | 339-653 |
| Cow position: | chr11:52320686-52320382 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 219, 17 |
| Conread position: | 342-678 |
| Cow position: | chr11:43371692-43372019 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 212, 17 |
| Conread position: | 345-702 |
| Cow position: | chr11:51057103-51057452 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 146, 26 |
| Conread position: | 346-732 |
| Cow position: | chr11:54364315-54364681 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 347-677 |
| Cow position: | chr11:71583273-71582935 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 347-729 |
| Cow position: | chr11:29655931-29655556 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 8 |
| Conread position: | 347-732 |
| Cow position: | chr11:42207505-42207114 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 348-732 |
| Cow position: | chr11:73194714-73194330 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 350-732 |
| Cow position: | chr11:50871034-50871417 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 9 |
| Conread position: | 351-644 |
| Cow position: | chr11:58993865-58993576 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 143 |
| Conread position: | 351-727 |
| Cow position: | chr11:10146762-10147149 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 353-722 |
| Cow position: | chr11:15406308-15406678 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 50 |
| Conread position: | 356-723 |
| Cow position: | chr11:11175701-11175346 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 356-724 |
| Cow position: | chr11:41475017-41474651 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 357-732 |
| Cow position: | chr11:81978882-81979268 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 27, 126 |
| Conread position: | 359-534 |
| Cow position: | chr11:77799107-77798930 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 112, 39 |
| Conread position: | 359-640 |
| Cow position: | chr11:35703488-35703760 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 112 |
| Conread position: | 359-712 |
| Cow position: | chr11:76964784-76965145 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 183 |
| Conread position: | 359-726 |
| Cow position: | chr11:54343095-54343461 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 361-717 |
| Cow position: | chr11:35222856-35222501 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 22, 183 |
| Conread position: | 362-732 |
| Cow position: | chr11:81643820-81643451 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 149, 128 |
| Conread position: | 364-724 |
| Cow position: | chr11:15261648-15261283 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 12, 178 |
| Conread position: | 364-724 |
| Cow position: | chr11:31423297-31422946 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 279, 43 |
| Conread position: | 364-726 |
| Cow position: | chr11:23909574-23909214 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 17 |
| Conread position: | 365-726 |
| Cow position: | chr11:47380647-47380267 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 365-732 |
| Cow position: | chr11:13510918-13510562 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 365-732 |
| Cow position: | chr11:38798372-38798003 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 366-705 |
| Cow position: | chr11:53931385-53931037 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 40, 196 |
| Conread position: | 366-724 |
| Cow position: | chr11:44409703-44410048 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 231, 25 |
| Conread position: | 366-729 |
| Cow position: | chr11:55316821-55316456 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 367-732 |
| Cow position: | chr11:24213756-24214132 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 169 |
| Conread position: | 369-723 |
| Cow position: | chr11:9165359-9165702 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 25, 104 |
| Conread position: | 370-703 |
| Cow position: | chr11:31326559-31326897 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 44, 108 |
| Conread position: | 370-726 |
| Cow position: | chr11:15437351-15437009 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 24 |
| Conread position: | 370-727 |
| Cow position: | chr11:7929681-7929332 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 167 |
| Conread position: | 370-728 |
| Cow position: | chr11:59802064-59801712 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 120, 22 |
| Conread position: | 370-729 |
| Cow position: | chr11:50014728-50015091 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 137, 42 |
| Conread position: | 371-649 |
| Cow position: | chr11:39181817-39182086 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 371-723 |
| Cow position: | chr11:54777713-54777382 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 224, 23 |
| Conread position: | 371-724 |
| Cow position: | chr11:61200939-61200583 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 151, 184 |
| Conread position: | 371-725 |
| Cow position: | chr11:79943817-79944176 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 371-727 |
| Cow position: | chr11:36237369-36237733 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 172 |
| Conread position: | 371-728 |
| Cow position: | chr11:50718914-50718551 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 91, 21 |
| Conread position: | 371-730 |
| Cow position: | chr11:9513261-9513638 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 278 |
| Conread position: | 371-732 |
| Cow position: | chr11:18757564-18757920 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 371-732 |
| Cow position: | chr11:53518395-53518027 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 23, 172 |
| Conread position: | 371-732 |
| Cow position: | chr11:66016950-66016591 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 35, 20 |
| Conread position: | 372-639 |
| Cow position: | chr11:37497651-37497370 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 205 |
| Conread position: | 372-727 |
| Cow position: | chr11:31893966-31893598 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 374-617 |
| Cow position: | chr11:53585903-53585653 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 182 |
| Conread position: | 374-724 |
| Cow position: | chr11:16649874-16650226 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 374-724 |
| Cow position: | chr11:54509851-54509512 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 193, 16 |
| Conread position: | 374-725 |
| Cow position: | chr11:9969270-9969625 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 374-725 |
| Cow position: | chr11:19812120-19812475 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 375-732 |
| Cow position: | chr11:28787885-28787526 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 141, 21 |
| Conread position: | 375-732 |
| Cow position: | chr11:74849612-74849252 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 252 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 13, 180 |
| Conread position: | 377-582 |
| Cow position: | chr11:40596352-40596545 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 114, 36 |
| Conread position: | 377-695 |
| Cow position: | chr11:8893530-8893850 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 379-658 |
| Cow position: | chr11:52036615-52036345 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 125, 103 |
| Conread position: | 381-732 |
| Cow position: | chr11:1304302-1304646 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 164, 95 |
| Conread position: | 382-673 |
| Cow position: | chr11:11739214-11739503 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 125, 10 |
| Conread position: | 382-726 |
| Cow position: | chr11:8111835-8112172 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 127 |
| Conread position: | 383-507 |
| Cow position: | chr11:4755795-4755919 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 383-654 |
| Cow position: | chr11:8727059-8727329 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 383-701 |
| Cow position: | chr11:52588601-52588917 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 96, 92 |
| Conread position: | 383-725 |
| Cow position: | chr11:56296982-56296638 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 71 |
| Conread position: | 383-725 |
| Cow position: | chr11:72381938-72382280 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 383-727 |
| Cow position: | chr11:26656635-26656293 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 13 |
| Conread position: | 383-727 |
| Cow position: | chr11:49018808-49018478 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 88, 42 |
| Conread position: | 383-728 |
| Cow position: | chr11:29327987-29328332 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 124 |
| Conread position: | 383-728 |
| Cow position: | chr11:50023337-50023681 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 108, 28 |
| Conread position: | 383-728 |
| Cow position: | chr11:71398601-71398258 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 81, 90 |
| Conread position: | 383-728 |
| Cow position: | chr11:81043078-81042737 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 123, 72 |
| Conread position: | 383-729 |
| Cow position: | chr11:55286855-55287198 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 118, 37 |
| Conread position: | 383-732 |
| Cow position: | chr11:23404195-23403858 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 126 |
| Conread position: | 383-732 |
| Cow position: | chr11:41523463-41523787 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 383-732 |
| Cow position: | chr11:44004382-44004041 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 122, 27 |
| Conread position: | 383-732 |
| Cow position: | chr11:46222194-46221849 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 159 |
| Conread position: | 383-732 |
| Cow position: | chr11:81805933-81805584 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 113, 96 |
| Conread position: | 385-702 |
| Cow position: | chr11:81700868-81701188 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 160 |
| Conread position: | 385-727 |
| Cow position: | chr11:40267358-40267707 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 241 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 106, 70 |
| Conread position: | 385-729 |
| Cow position: | chr11:2950099-2950431 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 59, 102 |
| Conread position: | 385-730 |
| Cow position: | chr11:67235037-67235384 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 46 |
| Conread position: | 385-732 |
| Cow position: | chr11:78791704-78791345 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 106, 151 |
| Conread position: | 387-578 |
| Cow position: | chr11:52480782-52480978 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 160 |
| Conread position: | 387-594 |
| Cow position: | chr11:29586630-29586428 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 35 |
| Conread position: | 387-614 |
| Cow position: | chr11:74117483-74117713 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 107, 148 |
| Conread position: | 387-664 |
| Cow position: | chr11:41635183-41634905 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 387-669 |
| Cow position: | chr11:76244194-76243918 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 387-678 |
| Cow position: | chr11:54437650-54437942 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 387-701 |
| Cow position: | chr11:76359188-76358885 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 387-706 |
| Cow position: | chr11:34657944-34657640 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 387-717 |
| Cow position: | chr11:12485288-12485620 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 44, 152 |
| Conread position: | 387-723 |
| Cow position: | chr11:50001767-50001443 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 125, 33 |
| Conread position: | 387-727 |
| Cow position: | chr11:27805573-27805926 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 387-727 |
| Cow position: | chr11:35783208-35782854 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 121, 224 |
| Conread position: | 387-728 |
| Cow position: | chr11:13443622-13443948 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 180, 80 |
| Conread position: | 387-728 |
| Cow position: | chr11:61215736-61216058 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 117, 49 |
| Conread position: | 387-728 |
| Cow position: | chr11:66307599-66307916 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 257, 44 |
| Conread position: | 387-729 |
| Cow position: | chr11:41604069-41604409 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 87 |
| Conread position: | 387-732 |
| Cow position: | chr11:3363066-3362714 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 147, 122 |
| Conread position: | 387-732 |
| Cow position: | chr11:6373853-6373515 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 119, 97 |
| Conread position: | 387-732 |
| Cow position: | chr11:9995629-9995279 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 33 |
| Conread position: | 387-732 |
| Cow position: | chr11:15290964-15290630 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 58, 84 |
| Conread position: | 387-732 |
| Cow position: | chr11:34634673-34635012 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 30 |
| Conread position: | 387-732 |
| Cow position: | chr11:43306290-43306616 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 62, 79 |
| Conread position: | 387-732 |
| Cow position: | chr11:55206673-55207028 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 151 |
| Conread position: | 387-732 |
| Cow position: | chr11:76496682-76497028 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 387-732 |
| Cow position: | chr11:82327350-82327707 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 252 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 111, 69 |
| Conread position: | 387-732 |
| Cow position: | chr11:84422820-84422480 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 152, 78 |
| Conread position: | 389-727 |
| Cow position: | chr11:22637780-22638103 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 116, 31 |
| Conread position: | 390-677 |
| Cow position: | chr11:38734560-38734845 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 114, 128 |
| Conread position: | 390-684 |
| Cow position: | chr11:52154205-52154497 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 119, 61 |
| Conread position: | 390-691 |
| Cow position: | chr11:53700699-53701001 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 66 |
| Conread position: | 390-713 |
| Cow position: | chr11:73627206-73626884 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 110, 129 |
| Conread position: | 390-728 |
| Cow position: | chr11:45419733-45419380 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 14, 185 |
| Conread position: | 390-729 |
| Cow position: | chr11:76776324-76776648 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 142, 19 |
| Conread position: | 390-732 |
| Cow position: | chr11:21018162-21017836 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 390-732 |
| Cow position: | chr11:41097459-41097788 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 241 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 122, 30 |
| Conread position: | 390-732 |
| Cow position: | chr11:62201641-62201989 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 149 |
| Conread position: | 390-732 |
| Cow position: | chr11:65484067-65484425 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 164 |
| Conread position: | 390-732 |
| Cow position: | chr11:78361480-78361799 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 391-726 |
| Cow position: | chr11:15095648-15095318 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 391-728 |
| Cow position: | chr11:72982892-72982551 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 86 |
| Conread position: | 391-729 |
| Cow position: | chr11:75191072-75190753 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 108, 34 |
| Conread position: | 392-723 |
| Cow position: | chr11:74241317-74241651 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 98, 30 |
| Conread position: | 392-732 |
| Cow position: | chr11:23354085-23353729 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 160 |
| Conread position: | 395-585 |
| Cow position: | chr11:54004647-54004838 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 113, 140 |
| Conread position: | 395-620 |
| Cow position: | chr11:43056661-43056893 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 41, 145 |
| Conread position: | 395-726 |
| Cow position: | chr11:67264824-67264499 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 114, 22 |
| Conread position: | 395-732 |
| Cow position: | chr11:23790731-23790391 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 140 |
| Conread position: | 396-727 |
| Cow position: | chr11:11681045-11681374 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 95, 146 |
| Conread position: | 397-732 |
| Cow position: | chr11:31137820-31138147 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 110, 37 |
| Conread position: | 399-719 |
| Cow position: | chr11:20495832-20496151 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 108 |
| Conread position: | 400-603 |
| Cow position: | chr11:48661943-48661738 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 91, 17 |
| Conread position: | 400-730 |
| Cow position: | chr11:34409089-34409418 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 96, 22 |
| Conread position: | 401-729 |
| Cow position: | chr11:39474114-39473810 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 238, 24 |
| Conread position: | 402-721 |
| Cow position: | chr11:2380036-2379730 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 242, 47 |
| Conread position: | 402-732 |
| Cow position: | chr11:16296251-16296572 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 107, 52 |
| Conread position: | 403-648 |
| Cow position: | chr11:2291229-2290986 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 106, 17 |
| Conread position: | 404-723 |
| Cow position: | chr11:30851241-30851552 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 242, 63 |
| Conread position: | 405-669 |
| Cow position: | chr11:47674475-47674212 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 134, 89 |
| Conread position: | 405-726 |
| Cow position: | chr11:15649112-15648798 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 241, 79 |
| Conread position: | 405-729 |
| Cow position: | chr11:59304275-59303958 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 405-729 |
| Cow position: | chr11:81850920-81850584 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 405-730 |
| Cow position: | chr11:16817386-16817067 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 405-732 |
| Cow position: | chr11:35261541-35261872 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 100, 53 |
| Conread position: | 406-724 |
| Cow position: | chr11:81900847-81900526 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 67, 139 |
| Conread position: | 407-732 |
| Cow position: | chr11:20835632-20835300 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 93, 42 |
| Conread position: | 407-732 |
| Cow position: | chr11:22883251-22882923 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 52 |
| Conread position: | 407-732 |
| Cow position: | chr11:62872728-62873036 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 237, 13 |
| Conread position: | 408-728 |
| Cow position: | chr11:54126353-54126665 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 35, 105 |
| Conread position: | 411-717 |
| Cow position: | chr11:48735113-48735421 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 98, 40 |
| Conread position: | 413-727 |
| Cow position: | chr11:42044849-42044531 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 53, 122 |
| Conread position: | 413-732 |
| Cow position: | chr11:9291793-9292105 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 56 |
| Conread position: | 414-732 |
| Cow position: | chr11:22547999-22547684 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 99, 182 |
| Conread position: | 417-728 |
| Cow position: | chr11:35959941-35959641 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 185 |
| Conread position: | 419-732 |
| Cow position: | chr11:15680866-15681181 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 75, 117 |
| Conread position: | 419-732 |
| Cow position: | chr11:17150584-17150882 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 227, 45 |
| Conread position: | 420-730 |
| Cow position: | chr11:34645294-34644988 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 422-724 |
| Cow position: | chr11:18926768-18926470 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 422-727 |
| Cow position: | chr11:80779566-80779873 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 47, 113 |
| Conread position: | 425-732 |
| Cow position: | chr11:8471290-8471586 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 275, 42 |
| Conread position: | 425-732 |
| Cow position: | chr11:50877198-50876889 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 110 |
| Conread position: | 432-725 |
| Cow position: | chr11:67763187-67762900 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 42 |
| Conread position: | 432-729 |
| Cow position: | chr11:41781235-41780937 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 116 |
| Conread position: | 436-732 |
| Cow position: | chr11:8581884-8582187 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 71, 104 |
| Conread position: | 437-730 |
| Cow position: | chr11:53204176-53203880 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 47 |
| Conread position: | 437-732 |
| Cow position: | chr11:4388327-4388622 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 5 |
| Conread position: | 438-732 |
| Cow position: | chr11:10270025-10270324 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 111, 58 |
| Conread position: | 444-728 |
| Cow position: | chr11:50824530-50824245 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 57, 98 |
| Conread position: | 444-729 |
| Cow position: | chr11:31026857-31027146 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 451-732 |
| Cow position: | chr11:43996117-43996392 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 45, 83 |
| Conread position: | 453-730 |
| Cow position: | chr11:58683614-58683885 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 455-732 |
| Cow position: | chr11:82387140-82386864 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 460-732 |
| Cow position: | chr11:80889335-80889602 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 186, 47 |
| Conread position: | 471-729 |
| Cow position: | chr11:56303581-56303325 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 80, 48 |
| Conread position: | 471-732 |
| Cow position: | chr11:12518499-12518758 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 169, 51 |
| Conread position: | 473-718 |
| Cow position: | chr11:81866596-81866357 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 63 |
| Conread position: | 480-729 |
| Cow position: | chr11:53815731-53815488 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 480-732 |
| Cow position: | chr11:1465463-1465210 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 483-724 |
| Cow position: | chr11:47338084-47338321 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 492-711 |
| Cow position: | chr11:57004787-57004571 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 492-722 |
| Cow position: | chr11:62788567-62788341 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 156, 41 |
| Conread position: | 500-732 |
| Cow position: | chr11:83560846-83561074 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 145, 11 |
| Conread position: | 503-691 |
| Cow position: | chr11:25683400-25683215 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 140, 42 |
| Conread position: | 503-693 |
| Cow position: | chr11:48470181-48470369 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 26 |
| Conread position: | 503-700 |
| Cow position: | chr11:2720383-2720583 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 162 |
| Conread position: | 503-700 |
| Cow position: | chr11:4247326-4247126 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 32, 162 |
| Conread position: | 503-725 |
| Cow position: | chr11:49983084-49982867 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 142, 42 |
| Conread position: | 503-726 |
| Cow position: | chr11:9231011-9230796 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 30, 40 |
| Conread position: | 503-728 |
| Cow position: | chr11:44475392-44475606 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 503-729 |
| Cow position: | chr11:23123366-23123590 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 171, 30 |
| Conread position: | 503-729 |
| Cow position: | chr11:82791280-82791064 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 142, 28 |
| Conread position: | 503-732 |
| Cow position: | chr11:21523003-21522780 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 503-732 |
| Cow position: | chr11:42772087-42772316 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 140, 49 |
| Conread position: | 507-729 |
| Cow position: | chr11:73421057-73420830 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 517-703 |
| Cow position: | chr11:40615981-40616167 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 113, 18 |
| Conread position: | 517-714 |
| Cow position: | chr11:79740666-79740860 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 128, 29 |
| Conread position: | 520-732 |
| Cow position: | chr11:61284105-61283895 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 85, 25 |
| Conread position: | 526-732 |
| Cow position: | chr11:23418968-23418765 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 530-732 |
| Cow position: | chr11:21520546-21520344 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 530-732 |
| Cow position: | chr11:23092761-23092561 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 531-732 |
| Cow position: | chr11:43627570-43627773 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 541-725 |
| Cow position: | chr11:60332477-60332664 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 541-728 |
| Cow position: | chr11:34609791-34609604 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 541-732 |
| Cow position: | chr11:72871354-72871164 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 105, 16 |
| Conread position: | 545-725 |
| Cow position: | chr11:4760463-4760282 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 546-732 |
| Cow position: | chr11:84807142-84807330 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 90, 153 |
| Conread position: | 547-724 |
| Cow position: | chr11:39526799-39526620 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 547-730 |
| Cow position: | chr11:80635452-80635630 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 93, 121 |
| Conread position: | 552-700 |
| Cow position: | chr11:52203210-52203062 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 91, 5 |
| Conread position: | 552-728 |
| Cow position: | chr11:72757821-72757645 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-723 |
| Cow position: | chr11:10757867-10758038 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 554-727 |
| Cow position: | chr11:58418146-58418321 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 6, 21 |
| Conread position: | 554-732 |
| Cow position: | chr11:71033517-71033696 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 554-732 |
| Cow position: | chr11:78132100-78132279 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 557-732 |
| Cow position: | chr11:1559192-1559019 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 557-732 |
| Cow position: | chr11:50268231-50268059 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 65 |
| Conread position: | 559-730 |
| Cow position: | chr11:23151936-23152108 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 560-722 |
| Cow position: | chr11:49483526-49483689 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 560-730 |
| Cow position: | chr11:72409014-72409185 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 562-719 |
| Cow position: | chr11:24308005-24308157 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 562-730 |
| Cow position: | chr11:54092736-54092571 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 77, 59 |
| Conread position: | 566-723 |
| Cow position: | chr11:42502936-42502778 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 569-725 |
| Cow position: | chr11:24302815-24302660 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 569-728 |
| Cow position: | chr11:35283026-35282864 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 152 |
| Conread position: | 571-718 |
| Cow position: | chr11:66605237-66605378 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 571-729 |
| Cow position: | chr11:36973994-36974150 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 571-732 |
| Cow position: | chr11:77192535-77192695 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 574-726 |
| Cow position: | chr11:55649856-55650009 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 575-723 |
| Cow position: | chr11:55487712-55487563 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 575-725 |
| Cow position: | chr11:84953841-84953694 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 116 |
| Conread position: | 576-728 |
| Cow position: | chr11:53585469-53585315 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 576-729 |
| Cow position: | chr11:8231524-8231372 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 577-723 |
| Cow position: | chr11:29810352-29810501 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 577-732 |
| Cow position: | chr11:65755531-65755688 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 588-732 |
| Cow position: | chr11:79132724-79132579 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 591-732 |
| Cow position: | chr11:35760956-35761099 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 609-732 |
| Cow position: | chr11:23972939-23973063 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 612-724 |
| Cow position: | chr11:22108826-22108714 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 106 |
| Conread position: | 628-732 |
| Cow position: | chr11:23117238-23117133 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.