Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8031H19.3 |
| Conread position: | 331-728 |
| Cow position: | chr13:40591823-40591436 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 236, 25 |
| Conread position: | 332-724 |
| Cow position: | chr13:32842436-32842041 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 333-729 |
| Cow position: | chr13:41701096-41701477 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 337-568 |
| Cow position: | chr13:22089531-22089301 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 343-728 |
| Cow position: | chr13:2539448-2539832 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 346-529 |
| Cow position: | chr13:40625263-40625073 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 346-732 |
| Cow position: | chr13:2980970-2980590 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 181, 18 |
| Conread position: | 353-720 |
| Cow position: | chr13:36074906-36075262 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 358-729 |
| Cow position: | chr13:20664701-20664326 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 358-732 |
| Cow position: | chr13:285860-285462 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 77 |
| Conread position: | 359-695 |
| Cow position: | chr13:52774828-52775167 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 359-696 |
| Cow position: | chr13:10739661-10739999 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 359-727 |
| Cow position: | chr13:4185127-4185483 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 359-732 |
| Cow position: | chr13:16672432-16672076 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 115 |
| Conread position: | 359-732 |
| Cow position: | chr13:31513332-31512956 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 266 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 359-732 |
| Cow position: | chr13:55757338-55756976 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 361-625 |
| Cow position: | chr13:4489650-4489381 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 5, 45 |
| Conread position: | 361-707 |
| Cow position: | chr13:40344889-40344536 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 21, 132 |
| Conread position: | 361-732 |
| Cow position: | chr13:44279538-44279917 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 272 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 133, 31 |
| Conread position: | 364-661 |
| Cow position: | chr13:33695936-33695642 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 16 |
| Conread position: | 364-724 |
| Cow position: | chr13:41254693-41255045 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 135 |
| Conread position: | 365-510 |
| Cow position: | chr13:36143988-36144134 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 365-659 |
| Cow position: | chr13:44643956-44644247 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 365-729 |
| Cow position: | chr13:56731868-56731501 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 258 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 366-718 |
| Cow position: | chr13:42726840-42726493 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 366-732 |
| Cow position: | chr13:41901384-41901767 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 139, 25 |
| Conread position: | 367-726 |
| Cow position: | chr13:17873140-17873497 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 27, 75 |
| Conread position: | 368-728 |
| Cow position: | chr13:44676920-44676563 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 12, 54 |
| Conread position: | 370-649 |
| Cow position: | chr13:19113019-19113305 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 13, 163 |
| Conread position: | 370-724 |
| Cow position: | chr13:46587242-46586889 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 371-637 |
| Cow position: | chr13:7114261-7113982 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 193 |
| Conread position: | 371-659 |
| Cow position: | chr13:56222657-56222380 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 371-720 |
| Cow position: | chr13:47472807-47473152 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 371-723 |
| Cow position: | chr13:14550352-14550682 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 371-729 |
| Cow position: | chr13:42855117-42854779 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 177, 49 |
| Conread position: | 371-732 |
| Cow position: | chr13:38073871-38074227 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 371-732 |
| Cow position: | chr13:41564555-41564925 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 23, 104 |
| Conread position: | 371-732 |
| Cow position: | chr13:60347210-60347572 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 372-726 |
| Cow position: | chr13:12684925-12685289 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 168 |
| Conread position: | 374-723 |
| Cow position: | chr13:27256813-27256461 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 374-729 |
| Cow position: | chr13:30080715-30081079 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 18, 146 |
| Conread position: | 374-732 |
| Cow position: | chr13:12687194-12687548 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 139, 21 |
| Conread position: | 379-722 |
| Cow position: | chr13:59476750-59476397 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 382-687 |
| Cow position: | chr13:20817809-20818116 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 109, 169 |
| Conread position: | 383-644 |
| Cow position: | chr13:48028065-48027815 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 133, 13 |
| Conread position: | 383-687 |
| Cow position: | chr13:22079392-22079694 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 126, 68 |
| Conread position: | 383-707 |
| Cow position: | chr13:36212725-36212409 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 162, 37 |
| Conread position: | 383-720 |
| Cow position: | chr13:22114646-22114964 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 263, 37 |
| Conread position: | 383-720 |
| Cow position: | chr13:24153574-24153894 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 37 |
| Conread position: | 383-722 |
| Cow position: | chr13:493045-492709 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 151 |
| Conread position: | 383-724 |
| Cow position: | chr13:55399600-55399945 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 77, 138 |
| Conread position: | 383-726 |
| Cow position: | chr13:49520640-49520292 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 55, 119 |
| Conread position: | 383-729 |
| Cow position: | chr13:21856433-21856091 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 37 |
| Conread position: | 383-732 |
| Cow position: | chr13:46996405-46996752 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 78, 163 |
| Conread position: | 383-732 |
| Cow position: | chr13:60026012-60026365 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 80, 160 |
| Conread position: | 385-642 |
| Cow position: | chr13:39459134-39459382 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 385-707 |
| Cow position: | chr13:52931773-52932100 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 123, 76 |
| Conread position: | 385-729 |
| Cow position: | chr13:18836560-18836244 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 226, 49 |
| Conread position: | 385-732 |
| Cow position: | chr13:32802864-32803214 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 84 |
| Conread position: | 386-724 |
| Cow position: | chr13:57995426-57995748 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 324, 26 |
| Conread position: | 386-732 |
| Cow position: | chr13:25860212-25859890 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 290, 34 |
| Conread position: | 387-507 |
| Cow position: | chr13:43580536-43580416 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-616 |
| Cow position: | chr13:33835187-33835413 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 117, 68 |
| Conread position: | 387-644 |
| Cow position: | chr13:34385045-34385292 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 138, 78 |
| Conread position: | 387-694 |
| Cow position: | chr13:43186030-43185725 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 250, 121 |
| Conread position: | 387-698 |
| Cow position: | chr13:2899872-2900180 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 118, 81 |
| Conread position: | 387-718 |
| Cow position: | chr13:2905423-2905754 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 102, 65 |
| Conread position: | 387-721 |
| Cow position: | chr13:48787505-48787170 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 120, 74 |
| Conread position: | 387-722 |
| Cow position: | chr13:40631250-40630914 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 117, 149 |
| Conread position: | 387-724 |
| Cow position: | chr13:52985691-52986026 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 387-724 |
| Cow position: | chr13:62301089-62301426 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 33 |
| Conread position: | 387-727 |
| Cow position: | chr13:20976777-20977114 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 256, 80 |
| Conread position: | 387-728 |
| Cow position: | chr13:6533334-6533678 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 38, 34 |
| Conread position: | 387-728 |
| Cow position: | chr13:44701181-44700841 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 139 |
| Conread position: | 387-729 |
| Cow position: | chr13:37348026-37347679 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 160 |
| Conread position: | 387-729 |
| Cow position: | chr13:46222152-46221822 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 73, 87 |
| Conread position: | 387-732 |
| Cow position: | chr13:11170508-11170835 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 387-732 |
| Cow position: | chr13:16988394-16988733 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 107, 148 |
| Conread position: | 387-732 |
| Cow position: | chr13:23212061-23211719 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 145, 23 |
| Conread position: | 387-732 |
| Cow position: | chr13:38727626-38727272 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 388-720 |
| Cow position: | chr13:46134077-46134406 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 388-729 |
| Cow position: | chr13:17706018-17706367 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 157 |
| Conread position: | 389-689 |
| Cow position: | chr13:58194683-58194976 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 107, 71 |
| Conread position: | 389-729 |
| Cow position: | chr13:20575183-20574837 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 57, 111 |
| Conread position: | 390-501 |
| Cow position: | chr13:54362391-54362281 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 390-662 |
| Cow position: | chr13:59316553-59316829 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 153 |
| Conread position: | 390-721 |
| Cow position: | chr13:2706009-2706351 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 206, 134 |
| Conread position: | 390-723 |
| Cow position: | chr13:10105635-10105960 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 177, 65 |
| Conread position: | 390-726 |
| Cow position: | chr13:47613613-47613297 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 200, 30 |
| Conread position: | 390-727 |
| Cow position: | chr13:34795059-34794708 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 106, 30 |
| Conread position: | 390-729 |
| Cow position: | chr13:16160496-16160842 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 148 |
| Conread position: | 390-732 |
| Cow position: | chr13:3119806-3120148 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 390-732 |
| Cow position: | chr13:24108989-24109311 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 155, 60 |
| Conread position: | 391-694 |
| Cow position: | chr13:26962676-26962376 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 118, 77 |
| Conread position: | 392-732 |
| Cow position: | chr13:13533169-13532823 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 32, 151 |
| Conread position: | 395-728 |
| Cow position: | chr13:17546485-17546821 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 50, 122 |
| Conread position: | 395-732 |
| Cow position: | chr13:33972033-33971704 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 108, 27 |
| Conread position: | 397-726 |
| Cow position: | chr13:14032538-14032868 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 94, 23 |
| Conread position: | 398-724 |
| Cow position: | chr13:28093767-28094087 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 398-732 |
| Cow position: | chr13:12570086-12570405 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 249, 111 |
| Conread position: | 401-691 |
| Cow position: | chr13:45142804-45143099 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 68, 139 |
| Conread position: | 401-730 |
| Cow position: | chr13:32802370-32802709 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 124, 19 |
| Conread position: | 405-713 |
| Cow position: | chr13:43503722-43503416 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 91, 129 |
| Conread position: | 405-718 |
| Cow position: | chr13:14725134-14724826 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 121, 95 |
| Conread position: | 409-694 |
| Cow position: | chr13:59123169-59123458 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 87, 157 |
| Conread position: | 413-683 |
| Cow position: | chr13:18439144-18438872 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 132 |
| Conread position: | 413-732 |
| Cow position: | chr13:2832704-2833037 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 138 |
| Conread position: | 422-732 |
| Cow position: | chr13:46350782-46351092 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 8 |
| Conread position: | 423-732 |
| Cow position: | chr13:13243975-13243670 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 73, 32 |
| Conread position: | 432-732 |
| Cow position: | chr13:30484466-30484770 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 88 |
| Conread position: | 434-725 |
| Cow position: | chr13:50125785-50126080 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 73, 112 |
| Conread position: | 436-722 |
| Cow position: | chr13:8372897-8373175 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 436-729 |
| Cow position: | chr13:47571245-47570944 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 69, 84 |
| Conread position: | 437-732 |
| Cow position: | chr13:34090171-34089881 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 67, 5 |
| Conread position: | 438-719 |
| Cow position: | chr13:609231-608964 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 201, 53 |
| Conread position: | 439-727 |
| Cow position: | chr13:51440077-51440370 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 52, 97 |
| Conread position: | 440-732 |
| Cow position: | chr13:48484657-48484363 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 111 |
| Conread position: | 444-725 |
| Cow position: | chr13:51303944-51304219 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 63, 91 |
| Conread position: | 444-732 |
| Cow position: | chr13:16551039-16551320 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 108 |
| Conread position: | 445-725 |
| Cow position: | chr13:46641896-46641615 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 457-732 |
| Cow position: | chr13:33621227-33620949 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 42, 100 |
| Conread position: | 471-732 |
| Cow position: | chr13:1915233-1915495 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 480-717 |
| Cow position: | chr13:46479626-46479862 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 483-728 |
| Cow position: | chr13:50790598-50790362 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 30 |
| Conread position: | 503-723 |
| Cow position: | chr13:7918195-7917986 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 503-727 |
| Cow position: | chr13:38725231-38725457 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 169, 63 |
| Conread position: | 503-729 |
| Cow position: | chr13:41654726-41654499 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 98, 34 |
| Conread position: | 503-732 |
| Cow position: | chr13:5430361-5430584 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 143, 22 |
| Conread position: | 503-732 |
| Cow position: | chr13:35008973-35008746 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 143, 28 |
| Conread position: | 505-724 |
| Cow position: | chr13:25587478-25587263 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 141, 83 |
| Conread position: | 515-728 |
| Cow position: | chr13:2476145-2475937 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 517-718 |
| Cow position: | chr13:38351918-38352121 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 527-726 |
| Cow position: | chr13:15255814-15255624 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 530-732 |
| Cow position: | chr13:54059656-54059854 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 531-728 |
| Cow position: | chr13:51092863-51092666 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 535-732 |
| Cow position: | chr13:44222858-44223050 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 112, 22 |
| Conread position: | 541-723 |
| Cow position: | chr13:49286376-49286199 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 137 |
| Conread position: | 541-732 |
| Cow position: | chr13:27738090-27737902 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 105, 16 |
| Conread position: | 541-732 |
| Cow position: | chr13:44464757-44464946 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 19 |
| Conread position: | 544-724 |
| Cow position: | chr13:4428915-4429095 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 107, 111 |
| Conread position: | 546-724 |
| Cow position: | chr13:18266074-18266251 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 548-723 |
| Cow position: | chr13:18144347-18144170 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 159 |
| Conread position: | 550-732 |
| Cow position: | chr13:33576011-33576187 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 30 |
| Conread position: | 552-732 |
| Cow position: | chr13:21651483-21651663 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 91, 6 |
| Conread position: | 556-724 |
| Cow position: | chr13:55958044-55957879 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 557-725 |
| Cow position: | chr13:48792573-48792743 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 93, 156 |
| Conread position: | 557-732 |
| Cow position: | chr13:9008849-9009026 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 557-732 |
| Cow position: | chr13:15710686-15710512 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 49 |
| Conread position: | 565-724 |
| Cow position: | chr13:27209109-27208948 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 566-726 |
| Cow position: | chr13:14932341-14932179 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 40 |
| Conread position: | 569-729 |
| Cow position: | chr13:21388829-21388986 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 570-732 |
| Cow position: | chr13:59454796-59454634 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 76, 37 |
| Conread position: | 571-725 |
| Cow position: | chr13:5656468-5656623 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 571-732 |
| Cow position: | chr13:59916688-59916852 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 572-728 |
| Cow position: | chr13:45131930-45132087 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 572-732 |
| Cow position: | chr13:36107423-36107262 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 574-729 |
| Cow position: | chr13:12912113-12912267 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 574-732 |
| Cow position: | chr13:37636091-37636249 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 73, 137 |
| Conread position: | 578-718 |
| Cow position: | chr13:46922067-46922205 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 36 |
| Conread position: | 581-725 |
| Cow position: | chr13:62437746-62437893 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 582-732 |
| Cow position: | chr13:58308707-58308855 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 583-718 |
| Cow position: | chr13:2789875-2789739 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 586-732 |
| Cow position: | chr13:44184556-44184703 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 621-732 |
| Cow position: | chr13:49575757-49575869 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.