Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8031H19.3
        

               Conread position:
               322-732
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 30
               

               Conread position:
               328-732
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               166, 29
               

               Conread position:
               332-728
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               271
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               31, 15
               

               Conread position:
               351-640
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 171
               

               Conread position:
               353-732
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               156, 53
               

               Conread position:
               357-732
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 108
               

               Conread position:
               359-722
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               21, 27
               

               Conread position:
               359-724
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               359-726
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               359-726
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               24, 189
               

               Conread position:
               361-732
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 62
               

               Conread position:
               361-732
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               11, 99
               

               Conread position:
               364-725
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               364-729
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               364-732
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 146
               

               Conread position:
               365-729
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               365-732
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               177, 29
               

               Conread position:
               365-732
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 191
               

               Conread position:
               366-578
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               371-674
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 94
               

               Conread position:
               371-718
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               18, 88
               

               Conread position:
               371-723
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               105, 19
               

               Conread position:
               371-724
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               256
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               15, 126
               

               Conread position:
               371-732
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 137
               

               Conread position:
               372-626
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               372-693
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               131, 163
               

               Conread position:
               372-725
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               372-732
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               373-721
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 36
               

               Conread position:
               373-728
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               374-717
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 17
               

               Conread position:
               374-725
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 20
               

               Conread position:
               383-640
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               89, 15
               

               Conread position:
               383-714
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               6, 54
               

               Conread position:
               383-718
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               113, 69
               

               Conread position:
               383-724
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               124, 85
               

               Conread position:
               383-729
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               122, 24
               

               Conread position:
               383-732
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               162, 39
               

               Conread position:
               384-732
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               245
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               106, 80
               

               Conread position:
               385-732
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               125, 35
               

               Conread position:
               386-729
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               32, 77
               

               Conread position:
               387-638
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 64
               

               Conread position:
               387-693
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               44, 72
               

               Conread position:
               387-717
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               107, 138
               

               Conread position:
               387-732
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               60, 71
               

               Conread position:
               387-732
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 93
               

               Conread position:
               387-732
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               44, 82
               

               Conread position:
               387-732
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 77
               

               Conread position:
               390-507
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               390-581
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               119, 143
               

               Conread position:
               390-684
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               30, 146
               

               Conread position:
               391-728
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               392-500
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               395-669
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               395-732
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 139
               

               Conread position:
               396-732
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               397-728
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               112, 62
               

               Conread position:
               402-732
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 129
               

               Conread position:
               405-724
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               101, 79
               

               Conread position:
               405-732
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               206, 17
               

               Conread position:
               405-732
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               201, 79
               

               Conread position:
               406-732
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               238, 27
               

               Conread position:
               407-732
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               88, 62
               

               Conread position:
               410-725
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               91, 44
               

               Conread position:
               411-693
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               96, 117
               

               Conread position:
               412-703
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               412-723
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               227, 84
               

               Conread position:
               412-732
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               93, 144
               

               Conread position:
               419-725
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               113, 35
               

               Conread position:
               436-732
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               68, 20
               

               Conread position:
               437-732
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               72, 119
               

               Conread position:
               439-718
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               59, 96
               

               Conread position:
               454-723
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               229, 58
               

               Conread position:
               480-718
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               29, 50
               

               Conread position:
               480-732
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               482-732
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               483-732
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               487-732
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               492-728
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               121, 37
               

               Conread position:
               492-732
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               153, 21
               

               Conread position:
               501-723
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               142, 56
               

               Conread position:
               503-723
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               99, 28
               

               Conread position:
               503-732
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               141, 42
               

               Conread position:
               505-716
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               138, 26
               

               Conread position:
               507-724
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               7, 105
               

               Conread position:
               538-732
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               109, 14
               

               Conread position:
               546-732
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               101, 11
               

               Conread position:
               546-732
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               548-730
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               550-723
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 24
               

               Conread position:
               552-732
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               559-723
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               147, 44
               

               Conread position:
               562-703
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               562-725
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               566-730
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               567-724
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               575-728
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               582-726
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               582-732
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               64, 47
               

               Conread position:
               586-723
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               586-732
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 118
               

               Conread position:
               593-732
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               596-728
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               622-732
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               24, 0
               
Show alignments to all cow chromosomes.