Cow genome map

Conread name: Ss1.1-Pig4-TMW8031H19.3

Conread position: 322-732
Cow position: chr14:7882395-7882806 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 30

Conread position: 328-732
Cow position: chr14:41480825-41480434 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 272
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 166, 29

Conread position: 332-728
Cow position: chr14:2293827-2293427 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 271
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 31, 15

Conread position: 351-640
Cow position: chr14:9093821-9094123 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 196
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 171

Conread position: 353-732
Cow position: chr14:11860583-11860205 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 243
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 156, 53

Conread position: 357-732
Cow position: chr14:41095612-41095977 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 268
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 22, 108

Conread position: 359-722
Cow position: chr14:39898546-39898181 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 27

Conread position: 359-724
Cow position: chr14:35666144-35666492 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 64

Conread position: 359-726
Cow position: chr14:25656522-25656896 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 244
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 19, 36

Conread position: 359-726
Cow position: chr14:33269127-33269503 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 24, 189

Conread position: 361-732
Cow position: chr14:10061281-10061657 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 62

Conread position: 361-732
Cow position: chr14:21367366-21367747 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 259
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 99

Conread position: 364-725
Cow position: chr14:20913610-20913246 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 235
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 28

Conread position: 364-729
Cow position: chr14:39399535-39399888 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 30

Conread position: 364-732
Cow position: chr14:14265179-14265543 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 146

Conread position: 365-729
Cow position: chr14:31225760-31225397 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 242
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 11, 35

Conread position: 365-732
Cow position: chr14:24520264-24519910 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 237
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 177, 29

Conread position: 365-732
Cow position: chr14:42214341-42213968 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 191

Conread position: 366-578
Cow position: chr14:42516475-42516264 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 29

Conread position: 371-674
Cow position: chr14:18109823-18109522 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 94

Conread position: 371-718
Cow position: chr14:18879949-18880299 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 18, 88

Conread position: 371-723
Cow position: chr14:41091017-41091360 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 105, 19

Conread position: 371-724
Cow position: chr14:20646048-20646414 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 256
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 15, 126

Conread position: 371-732
Cow position: chr14:19271575-19271925 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 137

Conread position: 372-626
Cow position: chr14:37976803-37977074 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 372-693
Cow position: chr14:2859812-2859489 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 131, 163

Conread position: 372-725
Cow position: chr14:43264315-43264665 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 52

Conread position: 372-732
Cow position: chr14:38677023-38677383 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 244
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 78

Conread position: 373-721
Cow position: chr14:17667363-17667704 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 36

Conread position: 373-728
Cow position: chr14:13359253-13358895 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 21, 84

Conread position: 374-717
Cow position: chr14:37352381-37352726 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 229
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 17

Conread position: 374-725
Cow position: chr14:24706476-24706822 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 228
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 20

Conread position: 383-640
Cow position: chr14:3485614-3485881 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 15

Conread position: 383-714
Cow position: chr14:25167892-25168220 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 6, 54

Conread position: 383-718
Cow position: chr14:33512837-33513169 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 113, 69

Conread position: 383-724
Cow position: chr14:33516497-33516164 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 124, 85

Conread position: 383-729
Cow position: chr14:37797553-37797896 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 232
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 122, 24

Conread position: 383-732
Cow position: chr14:8862308-8862640 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 228
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 162, 39

Conread position: 384-732
Cow position: chr14:48409344-48409692 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 106, 80

Conread position: 385-732
Cow position: chr14:43289329-43289677 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 125, 35

Conread position: 386-729
Cow position: chr14:43386381-43386728 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 77

Conread position: 387-638
Cow position: chr14:14805343-14805091 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 64

Conread position: 387-693
Cow position: chr14:17551707-17552004 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 201
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 72

Conread position: 387-717
Cow position: chr14:20991923-20992251 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 216
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 107, 138

Conread position: 387-732
Cow position: chr14:14241827-14242163 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 60, 71

Conread position: 387-732
Cow position: chr14:33184447-33184098 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 93

Conread position: 387-732
Cow position: chr14:41802110-41801772 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 82

Conread position: 387-732
Cow position: chr14:42466998-42467327 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 77

Conread position: 390-507
Cow position: chr14:2603857-2603974 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 390-581
Cow position: chr14:45397555-45397362 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 119, 143

Conread position: 390-684
Cow position: chr14:41867052-41867343 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 30, 146

Conread position: 391-728
Cow position: chr14:20036188-20036520 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 49

Conread position: 392-500
Cow position: chr14:21025592-21025700 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 395-669
Cow position: chr14:19018282-19017998 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 186
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 395-732
Cow position: chr14:11141601-11141946 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 80, 139

Conread position: 396-732
Cow position: chr14:4598462-4598811 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 118, 0

Conread position: 397-728
Cow position: chr14:3887043-3886727 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 62

Conread position: 402-732
Cow position: chr14:43790925-43790588 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 129

Conread position: 405-724
Cow position: chr14:5052172-5051854 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 101, 79

Conread position: 405-732
Cow position: chr14:39099068-39099382 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 206, 17

Conread position: 405-732
Cow position: chr14:40990380-40990053 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 206
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 201, 79

Conread position: 406-732
Cow position: chr14:18952995-18952678 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 206
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 238, 27

Conread position: 407-732
Cow position: chr14:24525865-24525545 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 62

Conread position: 410-725
Cow position: chr14:21691899-21691587 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 44

Conread position: 411-693
Cow position: chr14:38184318-38184032 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 96, 117

Conread position: 412-703
Cow position: chr14:6701837-6701555 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 58

Conread position: 412-723
Cow position: chr14:1734319-1734613 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 227, 84

Conread position: 412-732
Cow position: chr14:23460925-23461243 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 144

Conread position: 419-725
Cow position: chr14:47482101-47482407 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 113, 35

Conread position: 436-732
Cow position: chr14:7964772-7964479 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 68, 20

Conread position: 437-732
Cow position: chr14:39627690-39627390 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 72, 119

Conread position: 439-718
Cow position: chr14:37790708-37790440 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 96

Conread position: 454-723
Cow position: chr14:34193618-34193881 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 229, 58

Conread position: 480-718
Cow position: chr14:5124728-5124970 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 50

Conread position: 480-732
Cow position: chr14:40398798-40399050 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 14, 50

Conread position: 482-732
Cow position: chr14:33680951-33680697 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 54

Conread position: 483-732
Cow position: chr14:39562912-39562660 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 13, 46

Conread position: 487-732
Cow position: chr14:24146337-24146578 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 51

Conread position: 492-728
Cow position: chr14:44713151-44712917 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 121, 37

Conread position: 492-732
Cow position: chr14:41720082-41719844 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 153, 21

Conread position: 501-723
Cow position: chr14:31184130-31183908 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 142, 56

Conread position: 503-723
Cow position: chr14:11733031-11732814 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 99, 28

Conread position: 503-732
Cow position: chr14:6995397-6995621 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 141, 42

Conread position: 505-716
Cow position: chr14:40022220-40022015 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 138, 26

Conread position: 507-724
Cow position: chr14:4154134-4153919 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 105

Conread position: 538-732
Cow position: chr14:18429786-18429978 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 109, 14

Conread position: 546-732
Cow position: chr14:37634852-37635038 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 11

Conread position: 546-732
Cow position: chr14:43514716-43514527 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 45

Conread position: 548-730
Cow position: chr14:43241026-43240844 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 550-723
Cow position: chr14:35527272-35527097 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 24

Conread position: 552-732
Cow position: chr14:32172882-32173062 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 559-723
Cow position: chr14:30271123-30271285 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 147, 44

Conread position: 562-703
Cow position: chr14:20523483-20523626 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 562-725
Cow position: chr14:20803262-20803427 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 142, 0

Conread position: 566-730
Cow position: chr14:35003276-35003111 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 567-724
Cow position: chr14:34661888-34662048 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 575-728
Cow position: chr14:38700394-38700550 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 582-726
Cow position: chr14:43262163-43262017 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 24

Conread position: 582-732
Cow position: chr14:1861428-1861282 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 47

Conread position: 586-723
Cow position: chr14:20469085-20468947 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 586-732
Cow position: chr14:16016091-16016237 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 118

Conread position: 593-732
Cow position: chr14:39322570-39322430 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 596-728
Cow position: chr14:18248083-18248215 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 12

Conread position: 622-732
Cow position: chr14:26933010-26933121 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 24, 0

Show alignments to all cow chromosomes.