Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8031H19.3 |
| Conread position: | 297-725 |
| Cow position: | chr15:5431164-5431611 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 327-645 |
| Cow position: | chr15:26030526-26030206 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 66 |
| Conread position: | 333-732 |
| Cow position: | chr15:17607525-17607143 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 157, 20 |
| Conread position: | 337-602 |
| Cow position: | chr15:30623831-30624098 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 217 |
| Conread position: | 340-727 |
| Cow position: | chr15:40166140-40166518 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 342-728 |
| Cow position: | chr15:40472790-40472394 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 345-724 |
| Cow position: | chr15:22971563-22971944 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 347-730 |
| Cow position: | chr15:11720177-11720567 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 349-640 |
| Cow position: | chr15:9907525-9907831 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 357-708 |
| Cow position: | chr15:17874174-17873834 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 357-724 |
| Cow position: | chr15:13216800-13217162 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 357-728 |
| Cow position: | chr15:49074164-49073811 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 359-494 |
| Cow position: | chr15:9126779-9126645 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 359-694 |
| Cow position: | chr15:44012768-44012426 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 20, 179 |
| Conread position: | 359-724 |
| Cow position: | chr15:34169384-34169730 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 359-732 |
| Cow position: | chr15:48965481-48965854 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 113, 24 |
| Conread position: | 360-723 |
| Cow position: | chr15:11270578-11270950 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 266 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 361-732 |
| Cow position: | chr15:30790322-30790683 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 134 |
| Conread position: | 363-723 |
| Cow position: | chr15:37731652-37731291 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 17, 58 |
| Conread position: | 364-722 |
| Cow position: | chr15:41806203-41805851 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 364-724 |
| Cow position: | chr15:28090573-28090216 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 364-725 |
| Cow position: | chr15:7207049-7207400 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 25, 174 |
| Conread position: | 364-730 |
| Cow position: | chr15:40203942-40203574 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 364-732 |
| Cow position: | chr15:24963862-24963491 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 114 |
| Conread position: | 365-508 |
| Cow position: | chr15:16303045-16303190 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 365-722 |
| Cow position: | chr15:910806-911157 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 141, 42 |
| Conread position: | 365-730 |
| Cow position: | chr15:19326036-19326410 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 27, 123 |
| Conread position: | 367-701 |
| Cow position: | chr15:16425034-16425362 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 369-725 |
| Cow position: | chr15:32906999-32907362 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 369-732 |
| Cow position: | chr15:46589938-46590294 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 370-706 |
| Cow position: | chr15:8361217-8360879 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 104 |
| Conread position: | 370-726 |
| Cow position: | chr15:46549762-46550121 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 253 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 370-732 |
| Cow position: | chr15:41402082-41402428 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 371-599 |
| Cow position: | chr15:42774746-42774971 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 371-658 |
| Cow position: | chr15:41772929-41773218 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 371-732 |
| Cow position: | chr15:14548282-14547934 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 255 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 372-529 |
| Cow position: | chr15:19556931-19557091 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 133, 22 |
| Conread position: | 372-717 |
| Cow position: | chr15:39420661-39420301 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 11 |
| Conread position: | 372-723 |
| Cow position: | chr15:13943165-13943520 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 53 |
| Conread position: | 372-726 |
| Cow position: | chr15:39554854-39555217 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 173 |
| Conread position: | 372-732 |
| Cow position: | chr15:31975337-31974960 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 265 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 17, 99 |
| Conread position: | 373-732 |
| Cow position: | chr15:26850565-26850209 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 21 |
| Conread position: | 373-732 |
| Cow position: | chr15:28962201-28962547 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 374-724 |
| Cow position: | chr15:20433234-20432882 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 374-730 |
| Cow position: | chr15:24544785-24545146 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 378-732 |
| Cow position: | chr15:23246612-23246950 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 379-728 |
| Cow position: | chr15:15171540-15171188 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 381-729 |
| Cow position: | chr15:30051254-30050909 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 9 |
| Conread position: | 382-729 |
| Cow position: | chr15:34500695-34500348 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 63, 38 |
| Conread position: | 383-598 |
| Cow position: | chr15:11958972-11958758 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 125, 153 |
| Conread position: | 383-717 |
| Cow position: | chr15:17409667-17409320 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 383-718 |
| Cow position: | chr15:41702357-41702020 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 383-723 |
| Cow position: | chr15:23499215-23498877 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 121, 13 |
| Conread position: | 383-728 |
| Cow position: | chr15:17674730-17674380 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 53 |
| Conread position: | 383-728 |
| Cow position: | chr15:49067893-49067561 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 109, 68 |
| Conread position: | 383-730 |
| Cow position: | chr15:9115748-9116096 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 153 |
| Conread position: | 383-732 |
| Cow position: | chr15:14869989-14869645 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 106, 82 |
| Conread position: | 383-732 |
| Cow position: | chr15:26149014-26148681 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 261, 41 |
| Conread position: | 384-724 |
| Cow position: | chr15:26314768-26315106 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 37, 44 |
| Conread position: | 384-724 |
| Cow position: | chr15:52427024-52426696 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 37, 120 |
| Conread position: | 384-729 |
| Cow position: | chr15:20116365-20116015 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 112, 77 |
| Conread position: | 384-729 |
| Cow position: | chr15:20154217-20154559 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 146 |
| Conread position: | 385-670 |
| Cow position: | chr15:29982139-29982427 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 15, 113 |
| Conread position: | 385-696 |
| Cow position: | chr15:19115302-19115605 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 385-732 |
| Cow position: | chr15:33845914-33845572 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 385-732 |
| Cow position: | chr15:37461836-37461485 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 385-732 |
| Cow position: | chr15:39216194-39215868 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 80, 87 |
| Conread position: | 387-591 |
| Cow position: | chr15:9943489-9943291 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 107, 33 |
| Conread position: | 387-697 |
| Cow position: | chr15:33702187-33702505 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 99, 155 |
| Conread position: | 387-725 |
| Cow position: | chr15:35609865-35610201 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 82 |
| Conread position: | 387-726 |
| Cow position: | chr15:37934348-37934009 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 118, 151 |
| Conread position: | 387-728 |
| Cow position: | chr15:5884115-5883770 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 151 |
| Conread position: | 387-728 |
| Cow position: | chr15:8003396-8003741 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 116, 22 |
| Conread position: | 387-728 |
| Cow position: | chr15:10785101-10784765 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 112, 143 |
| Conread position: | 387-729 |
| Cow position: | chr15:9974273-9973941 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 141, 33 |
| Conread position: | 387-729 |
| Cow position: | chr15:30725264-30725599 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 258, 56 |
| Conread position: | 387-729 |
| Cow position: | chr15:33800499-33800853 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 71, 165 |
| Conread position: | 387-731 |
| Cow position: | chr15:24601181-24601517 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 47 |
| Conread position: | 387-732 |
| Cow position: | chr15:9720892-9720550 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 16 |
| Conread position: | 387-732 |
| Cow position: | chr15:13870795-13870449 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 34 |
| Conread position: | 387-732 |
| Cow position: | chr15:30324963-30324612 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 387-732 |
| Cow position: | chr15:40110998-40110648 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 33 |
| Conread position: | 387-732 |
| Cow position: | chr15:50206562-50206896 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 37, 83 |
| Conread position: | 388-628 |
| Cow position: | chr15:39464260-39464495 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 115, 102 |
| Conread position: | 388-724 |
| Cow position: | chr15:45012794-45013123 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 252, 77 |
| Conread position: | 388-732 |
| Cow position: | chr15:48412929-48413271 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 137, 106 |
| Conread position: | 389-732 |
| Cow position: | chr15:48782923-48783254 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 105, 42 |
| Conread position: | 390-722 |
| Cow position: | chr15:6283571-6283241 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 110, 20 |
| Conread position: | 390-727 |
| Cow position: | chr15:21944652-21944997 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 390-729 |
| Cow position: | chr15:39494081-39494425 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 77, 30 |
| Conread position: | 390-732 |
| Cow position: | chr15:39360836-39360499 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 391-614 |
| Cow position: | chr15:49245816-49245593 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 118, 29 |
| Conread position: | 391-718 |
| Cow position: | chr15:38751529-38751202 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 78, 119 |
| Conread position: | 392-726 |
| Cow position: | chr15:33619554-33619901 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 103, 59 |
| Conread position: | 394-732 |
| Cow position: | chr15:23103832-23103499 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 239, 40 |
| Conread position: | 395-644 |
| Cow position: | chr15:20607925-20608180 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 395-724 |
| Cow position: | chr15:46860032-46860356 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 395-727 |
| Cow position: | chr15:7068785-7068448 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 162 |
| Conread position: | 395-732 |
| Cow position: | chr15:37915421-37915760 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 25 |
| Conread position: | 396-732 |
| Cow position: | chr15:19564659-19564315 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 92, 144 |
| Conread position: | 397-720 |
| Cow position: | chr15:3648978-3648670 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 120, 24 |
| Conread position: | 397-723 |
| Cow position: | chr15:13682543-13682220 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 152 |
| Conread position: | 397-726 |
| Cow position: | chr15:22728381-22728050 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 97, 135 |
| Conread position: | 397-728 |
| Cow position: | chr15:33196193-33196514 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 122, 61 |
| Conread position: | 400-728 |
| Cow position: | chr15:32205947-32205633 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 9 |
| Conread position: | 400-729 |
| Cow position: | chr15:24606512-24606846 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 91, 154 |
| Conread position: | 400-732 |
| Cow position: | chr15:26182752-26182413 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 170, 52 |
| Conread position: | 401-677 |
| Cow position: | chr15:13626614-13626883 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 403-640 |
| Cow position: | chr15:11177978-11178231 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 405-724 |
| Cow position: | chr15:34077888-34077573 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 102, 124 |
| Conread position: | 407-732 |
| Cow position: | chr15:26660198-26660526 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 116, 15 |
| Conread position: | 408-727 |
| Cow position: | chr15:34215764-34215447 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 97, 47 |
| Conread position: | 410-730 |
| Cow position: | chr15:13677198-13676887 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 411-728 |
| Cow position: | chr15:19694134-19694450 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 413-729 |
| Cow position: | chr15:47059993-47060302 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 76, 123 |
| Conread position: | 415-725 |
| Cow position: | chr15:9971684-9971371 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 87, 36 |
| Conread position: | 420-669 |
| Cow position: | chr15:50084393-50084650 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 446-724 |
| Cow position: | chr15:18688305-18688020 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 456-695 |
| Cow position: | chr15:39612583-39612348 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 460-732 |
| Cow position: | chr15:27779844-27780116 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 54, 48 |
| Conread position: | 462-722 |
| Cow position: | chr15:23914349-23914088 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 480-725 |
| Cow position: | chr15:40837826-40837591 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 481-727 |
| Cow position: | chr15:37236702-37236943 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 498-729 |
| Cow position: | chr15:49446723-49446941 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 148, 28 |
| Conread position: | 503-725 |
| Cow position: | chr15:11835453-11835232 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 19 |
| Conread position: | 503-727 |
| Cow position: | chr15:12351613-12351392 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 214, 37 |
| Conread position: | 503-730 |
| Cow position: | chr15:35159492-35159271 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 141, 32 |
| Conread position: | 503-732 |
| Cow position: | chr15:23935726-23935955 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 32, 59 |
| Conread position: | 513-725 |
| Cow position: | chr15:33705813-33706021 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 531-726 |
| Cow position: | chr15:42599226-42599031 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 532-722 |
| Cow position: | chr15:33316459-33316647 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 112, 25 |
| Conread position: | 540-732 |
| Cow position: | chr15:29911094-29910901 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 107, 10 |
| Conread position: | 541-729 |
| Cow position: | chr15:25120817-25121004 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 104, 16 |
| Conread position: | 546-722 |
| Cow position: | chr15:38324105-38323924 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 11 |
| Conread position: | 546-729 |
| Cow position: | chr15:13262058-13262237 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 146, 11 |
| Conread position: | 546-732 |
| Cow position: | chr15:9038087-9038272 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 547-732 |
| Cow position: | chr15:20328605-20328791 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 171 |
| Conread position: | 547-732 |
| Cow position: | chr15:30439107-30438923 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 548-732 |
| Cow position: | chr15:894745-894929 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 554-732 |
| Cow position: | chr15:9439397-9439220 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 92, 64 |
| Conread position: | 557-728 |
| Cow position: | chr15:17441550-17441720 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 59 |
| Conread position: | 557-732 |
| Cow position: | chr15:46263616-46263441 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 105 |
| Conread position: | 562-726 |
| Cow position: | chr15:33219106-33219270 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 78, 156 |
| Conread position: | 562-732 |
| Cow position: | chr15:15364047-15364219 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 562-732 |
| Cow position: | chr15:38207820-38207651 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 82, 94 |
| Conread position: | 564-723 |
| Cow position: | chr15:7250264-7250108 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 564-727 |
| Cow position: | chr15:40286883-40287045 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 9 |
| Conread position: | 572-730 |
| Cow position: | chr15:30709306-30709147 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 573-714 |
| Cow position: | chr15:7446709-7446851 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 575-717 |
| Cow position: | chr15:33432368-33432225 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 580-724 |
| Cow position: | chr15:34269220-34269364 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 121 |
| Conread position: | 580-725 |
| Cow position: | chr15:10965422-10965573 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 582-732 |
| Cow position: | chr15:9076854-9076706 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 64, 91 |
| Conread position: | 582-732 |
| Cow position: | chr15:30230228-30230374 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 606-732 |
| Cow position: | chr15:50294361-50294236 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 621-728 |
| Cow position: | chr15:25049049-25048941 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.