Cow genome map

Conread name: Ss1.1-Pig4-TMW8031H19.3

Conread position: 316-666
Cow position: chr16:38527083-38527436 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 60

Conread position: 322-721
Cow position: chr16:19305594-19305996 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 273
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 58, 13

Conread position: 328-710
Cow position: chr16:30835758-30836143 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 22, 142

Conread position: 333-699
Cow position: chr16:15174711-15175072 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 236
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 171, 8

Conread position: 342-732
Cow position: chr16:46497041-46497414 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 264
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 5

Conread position: 343-722
Cow position: chr16:18361423-18361051 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 243
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 14

Conread position: 348-724
Cow position: chr16:37408856-37408472 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 249
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 21, 46

Conread position: 348-732
Cow position: chr16:46099449-46099831 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 263
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 11

Conread position: 353-692
Cow position: chr16:49203494-49203156 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 224
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 70

Conread position: 353-728
Cow position: chr16:3089557-3089921 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 356-624
Cow position: chr16:46387075-46387344 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 153, 15

Conread position: 356-694
Cow position: chr16:43772899-43772561 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 35, 14

Conread position: 357-726
Cow position: chr16:13023362-13023723 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 249
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 42, 37

Conread position: 357-732
Cow position: chr16:17295099-17294729 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 27, 64

Conread position: 359-730
Cow position: chr16:45354717-45355083 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 253
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 32

Conread position: 359-732
Cow position: chr16:2817971-2818356 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 257
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 139

Conread position: 359-732
Cow position: chr16:10597377-10597753 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 182

Conread position: 359-732
Cow position: chr16:20987391-20987763 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 245
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 135, 11

Conread position: 359-732
Cow position: chr16:46062920-46063299 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 256
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 198

Conread position: 360-536
Cow position: chr16:52242779-52242962 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 360-706
Cow position: chr16:38549863-38550201 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 7, 133

Conread position: 360-732
Cow position: chr16:42409244-42409624 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 151

Conread position: 361-732
Cow position: chr16:16844522-16844870 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 18, 32

Conread position: 362-506
Cow position: chr16:19652979-19653123 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 114

Conread position: 362-640
Cow position: chr16:22824253-22824544 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 365-627
Cow position: chr16:38480609-38480899 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 367-622
Cow position: chr16:15945518-15945778 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 18, 170

Conread position: 367-724
Cow position: chr16:15552026-15551666 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 43

Conread position: 370-720
Cow position: chr16:49123076-49123421 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 226
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 21

Conread position: 370-725
Cow position: chr16:15212549-15212918 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 21, 71

Conread position: 372-722
Cow position: chr16:13298858-13299215 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 153

Conread position: 372-725
Cow position: chr16:32356648-32357007 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 226
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 22

Conread position: 372-732
Cow position: chr16:40384834-40384478 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 26, 19

Conread position: 372-732
Cow position: chr16:55270861-55270513 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 22

Conread position: 373-717
Cow position: chr16:8661411-8661784 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 328

Conread position: 374-723
Cow position: chr16:13418845-13419193 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 237
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 107, 33

Conread position: 375-687
Cow position: chr16:3199884-3199577 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 131, 40

Conread position: 375-720
Cow position: chr16:44755666-44756009 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 224
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 19

Conread position: 376-710
Cow position: chr16:25403621-25403957 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 128, 7

Conread position: 376-719
Cow position: chr16:18514643-18514304 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 229
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 34

Conread position: 377-717
Cow position: chr16:13886216-13885880 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 12, 90

Conread position: 378-728
Cow position: chr16:870783-871133 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 11, 98

Conread position: 380-732
Cow position: chr16:31686251-31685904 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 16

Conread position: 381-728
Cow position: chr16:38499442-38499102 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 8, 19

Conread position: 383-617
Cow position: chr16:45305663-45305900 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 155

Conread position: 383-722
Cow position: chr16:3299344-3299667 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 111, 74

Conread position: 383-728
Cow position: chr16:23732122-23732459 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 58

Conread position: 383-732
Cow position: chr16:29357172-29357515 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 173

Conread position: 383-732
Cow position: chr16:41531621-41531253 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 16

Conread position: 385-726
Cow position: chr16:37421234-37421574 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 111, 14

Conread position: 385-726
Cow position: chr16:50456523-50456870 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 10, 18

Conread position: 385-728
Cow position: chr16:5736301-5736633 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 230
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 118, 70

Conread position: 386-728
Cow position: chr16:15303789-15303460 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 110, 25

Conread position: 386-732
Cow position: chr16:15955432-15955086 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 149

Conread position: 387-571
Cow position: chr16:958104-957922 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 65

Conread position: 387-595
Cow position: chr16:17657132-17656926 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 64

Conread position: 387-707
Cow position: chr16:10526817-10527130 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 206
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 93, 144

Conread position: 387-723
Cow position: chr16:15993288-15992949 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 149

Conread position: 387-724
Cow position: chr16:12546245-12546570 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 222, 38

Conread position: 387-724
Cow position: chr16:20867624-20867281 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 163

Conread position: 387-724
Cow position: chr16:40481017-40480680 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 101, 69

Conread position: 387-727
Cow position: chr16:11080804-11080460 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 154

Conread position: 387-728
Cow position: chr16:17873742-17874083 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 161

Conread position: 387-728
Cow position: chr16:46439976-46440314 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 122, 8

Conread position: 387-729
Cow position: chr16:40365761-40366084 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 104, 70

Conread position: 387-732
Cow position: chr16:14363286-14362943 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 90, 166

Conread position: 387-732
Cow position: chr16:15973042-15973389 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 181, 50

Conread position: 387-732
Cow position: chr16:20564901-20564553 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 154

Conread position: 387-732
Cow position: chr16:24759894-24759569 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 127, 78

Conread position: 387-732
Cow position: chr16:28139407-28139062 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 232
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 117, 5

Conread position: 387-732
Cow position: chr16:41201907-41202240 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 107, 42

Conread position: 388-640
Cow position: chr16:32151497-32151746 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 105, 11

Conread position: 388-722
Cow position: chr16:12174435-12174764 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 127, 39

Conread position: 388-732
Cow position: chr16:36794954-36794618 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 245, 7

Conread position: 389-729
Cow position: chr16:6651372-6651039 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 111, 31

Conread position: 390-507
Cow position: chr16:20281935-20282049 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 390-701
Cow position: chr16:18141871-18142177 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 74, 123

Conread position: 390-717
Cow position: chr16:43798323-43798649 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 104, 149

Conread position: 390-725
Cow position: chr16:23930370-23930701 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 30

Conread position: 390-728
Cow position: chr16:34211692-34211353 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 238
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 106, 30

Conread position: 390-728
Cow position: chr16:42518052-42517719 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 101, 137

Conread position: 390-729
Cow position: chr16:29322387-29322717 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 80

Conread position: 390-732
Cow position: chr16:14329370-14329029 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 158

Conread position: 390-732
Cow position: chr16:52403849-52403512 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 78

Conread position: 391-716
Cow position: chr16:13003198-13002879 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 240, 93

Conread position: 391-732
Cow position: chr16:19446572-19446228 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 242
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 93, 160

Conread position: 391-732
Cow position: chr16:22579316-22579661 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 118, 53

Conread position: 392-732
Cow position: chr16:21341951-21341627 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 393-728
Cow position: chr16:19350172-19350491 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 229
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 247, 29

Conread position: 395-718
Cow position: chr16:22375665-22375984 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 100

Conread position: 396-723
Cow position: chr16:37345899-37346230 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 97, 148

Conread position: 396-726
Cow position: chr16:42636606-42636931 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 93, 16

Conread position: 397-725
Cow position: chr16:48448076-48448402 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 108, 154

Conread position: 398-688
Cow position: chr16:15899618-15899322 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 109, 71

Conread position: 400-684
Cow position: chr16:17509599-17509317 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 109, 54

Conread position: 400-729
Cow position: chr16:31580707-31581038 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 20

Conread position: 401-707
Cow position: chr16:37808637-37808341 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 205
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 61

Conread position: 401-728
Cow position: chr16:32132136-32131800 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 159

Conread position: 401-732
Cow position: chr16:32158286-32157956 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 113, 45

Conread position: 402-691
Cow position: chr16:16714857-16715151 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 144

Conread position: 403-718
Cow position: chr16:11179619-11179300 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 102, 23

Conread position: 403-732
Cow position: chr16:40442318-40441998 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 215
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 69, 57

Conread position: 405-732
Cow position: chr16:1625703-1626025 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 56

Conread position: 405-732
Cow position: chr16:4598202-4597872 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 100, 130

Conread position: 405-732
Cow position: chr16:32891502-32891172 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 95, 20

Conread position: 405-732
Cow position: chr16:51105016-51104682 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 127

Conread position: 407-716
Cow position: chr16:10625214-10625529 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 99, 154

Conread position: 408-700
Cow position: chr16:30665344-30665638 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 194
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 117, 104

Conread position: 410-725
Cow position: chr16:44561717-44562021 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 94

Conread position: 412-728
Cow position: chr16:20722749-20722433 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 205
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 70

Conread position: 412-728
Cow position: chr16:30087486-30087812 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 208
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 144

Conread position: 412-732
Cow position: chr16:20262372-20262062 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 97, 120

Conread position: 413-725
Cow position: chr16:54457170-54457487 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 117

Conread position: 419-729
Cow position: chr16:16140132-16140446 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 117

Conread position: 422-732
Cow position: chr16:14618669-14618975 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 30

Conread position: 423-718
Cow position: chr16:45648446-45648734 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 193
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 214, 41

Conread position: 435-732
Cow position: chr16:22325190-22324901 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 55, 99

Conread position: 436-661
Cow position: chr16:42077157-42076930 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 105

Conread position: 438-729
Cow position: chr16:52697041-52696744 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 113

Conread position: 444-732
Cow position: chr16:53046628-53046341 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 199
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 54, 97

Conread position: 448-732
Cow position: chr16:3308374-3308660 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 67

Conread position: 455-628
Cow position: chr16:20807055-20806879 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 82

Conread position: 455-724
Cow position: chr16:29097541-29097272 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 14

Conread position: 455-729
Cow position: chr16:15659101-15658812 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 19

Conread position: 476-732
Cow position: chr16:4747486-4747739 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 47

Conread position: 481-728
Cow position: chr16:16586985-16586730 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 240

Conread position: 482-724
Cow position: chr16:37054204-37054441 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 20

Conread position: 490-732
Cow position: chr16:12528408-12528172 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 155, 39

Conread position: 492-724
Cow position: chr16:27106913-27106684 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 95, 37

Conread position: 503-723
Cow position: chr16:45300817-45301035 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 143, 16

Conread position: 503-732
Cow position: chr16:19395551-19395773 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 140, 28

Conread position: 503-732
Cow position: chr16:37081909-37082132 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 146, 83

Conread position: 503-732
Cow position: chr16:46617228-46617004 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 143, 19

Conread position: 504-714
Cow position: chr16:28863470-28863677 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 141, 31

Conread position: 505-732
Cow position: chr16:2519343-2519566 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 52

Conread position: 517-732
Cow position: chr16:29310609-29310400 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 128, 14

Conread position: 517-732
Cow position: chr16:33977381-33977588 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 127, 23

Conread position: 519-729
Cow position: chr16:1769645-1769849 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 520-732
Cow position: chr16:27475575-27475787 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 26

Conread position: 529-732
Cow position: chr16:48321668-48321869 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 116, 16

Conread position: 541-725
Cow position: chr16:19989174-19988989 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 106, 58

Conread position: 541-727
Cow position: chr16:15742547-15742731 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 106, 11

Conread position: 543-728
Cow position: chr16:34477872-34478057 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 173

Conread position: 543-730
Cow position: chr16:18950537-18950725 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 36, 19

Conread position: 546-726
Cow position: chr16:42133465-42133286 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 100, 11

Conread position: 547-729
Cow position: chr16:56834424-56834606 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 98, 18

Conread position: 548-723
Cow position: chr16:34209823-34209649 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 6, 13

Conread position: 548-725
Cow position: chr16:31575939-31575768 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 12

Conread position: 548-729
Cow position: chr16:17657575-17657399 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 122

Conread position: 548-732
Cow position: chr16:31060427-31060243 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 98, 40

Conread position: 550-723
Cow position: chr16:19067966-19067796 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 7

Conread position: 553-730
Cow position: chr16:12389911-12390088 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 90, 53

Conread position: 554-732
Cow position: chr16:41386492-41386667 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 29

Conread position: 557-716
Cow position: chr16:20669290-20669128 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 559-727
Cow position: chr16:2508705-2508872 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 86, 15

Conread position: 559-728
Cow position: chr16:30342225-30342395 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 561-732
Cow position: chr16:47799019-47798848 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 152

Conread position: 562-732
Cow position: chr16:12878949-12879113 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 562-732
Cow position: chr16:19286842-19286673 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 113

Conread position: 568-730
Cow position: chr16:39372290-39372453 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 569-722
Cow position: chr16:43816500-43816651 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 17

Conread position: 570-728
Cow position: chr16:34408725-34408883 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 76, 28

Conread position: 571-732
Cow position: chr16:19492586-19492425 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 147

Conread position: 575-732
Cow position: chr16:52242965-52243121 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 11

Conread position: 586-730
Cow position: chr16:15324921-15324777 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 586-732
Cow position: chr16:42165473-42165619 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 33

Conread position: 600-725
Cow position: chr16:42790839-42790713 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 620-724
Cow position: chr16:36795091-36794988 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 8

Conread position: 624-728
Cow position: chr16:55022432-55022535 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Show alignments to all cow chromosomes.