Cow genome map
Conread name: | Ss1.1-Pig4-TMW8031H19.3 |
Conread position: | 242-644 |
Cow position: | chr20:7848283-7847879 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 266 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 74, 24 |
Conread position: | 315-727 |
Cow position: | chr20:6632115-6631717 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 281 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 189, 44 |
Conread position: | 347-640 |
Cow position: | chr20:12300166-12300462 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 198 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 146, 16 |
Conread position: | 347-707 |
Cow position: | chr20:1049455-1049813 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 232 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 53, 44 |
Conread position: | 358-522 |
Cow position: | chr20:24174956-24174786 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 121 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 359-640 |
Cow position: | chr20:23642655-23642944 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 193 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 17, 208 |
Conread position: | 359-728 |
Cow position: | chr20:3399478-3399127 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 250 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 30, 78 |
Conread position: | 359-729 |
Cow position: | chr20:2781638-2782002 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 256 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 33, 10 |
Conread position: | 361-725 |
Cow position: | chr20:34312346-34311971 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 250 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 33, 9 |
Conread position: | 361-732 |
Cow position: | chr20:8719297-8718921 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 197 |
Conread position: | 362-506 |
Cow position: | chr20:35150699-35150546 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 369-507 |
Cow position: | chr20:7768083-7767944 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 370-732 |
Cow position: | chr20:1330121-1330476 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 250 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 79, 19 |
Conread position: | 370-732 |
Cow position: | chr20:5118954-5119320 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 20 |
Conread position: | 372-694 |
Cow position: | chr20:22651651-22651339 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 215 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 48, 20 |
Conread position: | 372-717 |
Cow position: | chr20:3388392-3388735 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 227 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 8, 38 |
Conread position: | 373-698 |
Cow position: | chr20:7620925-7621252 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 210 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 21, 35 |
Conread position: | 377-724 |
Cow position: | chr20:3446779-3446422 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 240 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 380-640 |
Cow position: | chr20:38916379-38916639 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 175 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 110, 155 |
Conread position: | 381-720 |
Cow position: | chr20:5891701-5892044 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 239 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 25, 13 |
Conread position: | 383-604 |
Cow position: | chr20:12358448-12358671 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 160 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 126, 153 |
Conread position: | 383-703 |
Cow position: | chr20:30352175-30352481 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 206 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 263, 37 |
Conread position: | 384-732 |
Cow position: | chr20:13064229-13063899 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 242 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 262, 18 |
Conread position: | 387-592 |
Cow position: | chr20:22912929-22913132 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 148 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 104, 148 |
Conread position: | 387-674 |
Cow position: | chr20:6007172-6007459 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 210 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 51, 23 |
Conread position: | 387-723 |
Cow position: | chr20:22930092-22930430 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 223 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 115, 12 |
Conread position: | 387-727 |
Cow position: | chr20:12140904-12141245 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 247 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 56, 158 |
Conread position: | 387-727 |
Cow position: | chr20:30182232-30181899 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 232 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 105, 146 |
Conread position: | 387-729 |
Cow position: | chr20:21912541-21912208 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 234 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 161, 77 |
Conread position: | 387-732 |
Cow position: | chr20:3160441-3160094 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 248 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 21, 59 |
Conread position: | 387-732 |
Cow position: | chr20:4853326-4853672 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 149 |
Conread position: | 387-732 |
Cow position: | chr20:23331777-23332120 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 231 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 89, 127 |
Conread position: | 388-598 |
Cow position: | chr20:21387891-21387687 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 149 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 121, 63 |
Conread position: | 388-732 |
Cow position: | chr20:41462794-41462454 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 232 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 119, 163 |
Conread position: | 390-722 |
Cow position: | chr20:26786689-26787026 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 241 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 75, 32 |
Conread position: | 390-724 |
Cow position: | chr20:12195904-12196241 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 159 |
Conread position: | 390-726 |
Cow position: | chr20:150627-150301 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 235 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 288, 31 |
Conread position: | 390-727 |
Cow position: | chr20:1513928-1514280 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 244 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 69, 159 |
Conread position: | 390-732 |
Cow position: | chr20:22953275-22953623 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 28 |
Conread position: | 390-732 |
Cow position: | chr20:34938675-34939010 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 221 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 256, 80 |
Conread position: | 392-648 |
Cow position: | chr20:24569659-24569405 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 181 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 99, 141 |
Conread position: | 392-727 |
Cow position: | chr20:13710465-13710802 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 144 |
Conread position: | 396-729 |
Cow position: | chr20:3798519-3798847 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 226 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 108, 140 |
Conread position: | 400-728 |
Cow position: | chr20:2177980-2178311 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 237 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 75, 67 |
Conread position: | 401-656 |
Cow position: | chr20:29396613-29396366 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 172 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 111, 48 |
Conread position: | 404-661 |
Cow position: | chr20:24099624-24099362 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 181 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 68, 63 |
Conread position: | 404-725 |
Cow position: | chr20:8476671-8476355 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 215 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 16, 66 |
Conread position: | 405-732 |
Cow position: | chr20:24697681-24697364 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 218 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 238, 115 |
Conread position: | 407-714 |
Cow position: | chr20:5903146-5903438 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 212 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 260, 27 |
Conread position: | 411-725 |
Cow position: | chr20:26402054-26402370 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 221 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 94, 118 |
Conread position: | 420-719 |
Cow position: | chr20:2946494-2946194 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 199 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 57, 35 |
Conread position: | 422-732 |
Cow position: | chr20:27195893-27195580 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 198 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 95, 171 |
Conread position: | 435-732 |
Cow position: | chr20:13672868-13673163 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 212 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 55, 103 |
Conread position: | 446-729 |
Cow position: | chr20:5782857-5782564 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 204 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 45, 102 |
Conread position: | 453-732 |
Cow position: | chr20:35462459-35462178 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 191 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 99, 59 |
Conread position: | 464-732 |
Cow position: | chr20:8662003-8661728 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 186 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 8, 76 |
Conread position: | 468-717 |
Cow position: | chr20:17698621-17698371 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 170 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 30, 10 |
Conread position: | 481-732 |
Cow position: | chr20:701711-701964 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 184 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 27, 59 |
Conread position: | 490-729 |
Cow position: | chr20:17685536-17685301 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 160 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 85, 25 |
Conread position: | 503-729 |
Cow position: | chr20:5726469-5726243 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 166 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 42, 30 |
Conread position: | 503-732 |
Cow position: | chr20:29078413-29078641 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 158 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 50, 29 |
Conread position: | 505-729 |
Cow position: | chr20:23142586-23142808 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 161 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 42, 14 |
Conread position: | 507-728 |
Cow position: | chr20:20068360-20068145 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 154 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 508-732 |
Cow position: | chr20:8596878-8596657 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 153 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 138, 37 |
Conread position: | 523-728 |
Cow position: | chr20:35010648-35010853 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 145 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 127, 10 |
Conread position: | 529-730 |
Cow position: | chr20:5676464-5676262 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 148 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 546-728 |
Cow position: | chr20:9269660-9269482 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 137 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 100, 30 |
Conread position: | 549-732 |
Cow position: | chr20:35149688-35149509 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 130 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 103, 56 |
Conread position: | 558-732 |
Cow position: | chr20:17930093-17929917 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 130 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 79, 115 |
Conread position: | 562-726 |
Cow position: | chr20:6849540-6849701 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 566-725 |
Cow position: | chr20:8092930-8093094 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 571-730 |
Cow position: | chr20:27441829-27441989 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 113 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 580-732 |
Cow position: | chr20:12835291-12835443 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 66, 12 |
Conread position: | 581-723 |
Cow position: | chr20:922762-922902 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 107 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 65, 48 |
Conread position: | 582-723 |
Cow position: | chr20:4619884-4620023 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 117 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 57, 25 |
Conread position: | 582-726 |
Cow position: | chr20:34840446-34840592 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 108 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 585-721 |
Cow position: | chr20:26343727-26343589 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 103 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 621-732 |
Cow position: | chr20:5787320-5787207 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 91 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 623-723 |
Cow position: | chr20:7397235-7397134 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 84 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.