Cow genome map

Conread name: Ss1.1-Pig4-TMW8031H19.3

Conread position: 298-703
Cow position:
Alignm length: 414
Alignm identity: 275
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 79, 37

Conread position: 325-721
Cow position:
Alignm length: 403
Alignm identity: 269
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 27, 60

Conread position: 329-732
Cow position:
Alignm length: 409
Alignm identity: 262
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 176, 28

Conread position: 332-723
Cow position:
Alignm length: 408
Alignm identity: 259
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 77

Conread position: 340-636
Cow position:
Alignm length: 314
Alignm identity: 211
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 230

Conread position: 344-644
Cow position:
Alignm length: 313
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 186

Conread position: 346-596
Cow position:
Alignm length: 259
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 13

Conread position: 346-732
Cow position:
Alignm length: 391
Alignm identity: 243
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 38

Conread position: 347-732
Cow position:
Alignm length: 397
Alignm identity: 264
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 22, 135

Conread position: 350-732
Cow position:
Alignm length: 386
Alignm identity: 250
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 47

Conread position: 356-732
Cow position:
Alignm length: 383
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 21

Conread position: 358-529
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 69

Conread position: 358-728
Cow position:
Alignm length: 385
Alignm identity: 259
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 66

Conread position: 359-732
Cow position:
Alignm length: 382
Alignm identity: 248
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 12

Conread position: 360-667
Cow position:
Alignm length: 317
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 360-721
Cow position:
Alignm length: 375
Alignm identity: 254
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 187

Conread position: 361-533
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 55

Conread position: 364-728
Cow position:
Alignm length: 372
Alignm identity: 246
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 11, 107

Conread position: 364-732
Cow position:
Alignm length: 372
Alignm identity: 245
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 12, 101

Conread position: 366-507
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 136

Conread position: 366-732
Cow position:
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 12

Conread position: 367-616
Cow position:
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 170

Conread position: 369-603
Cow position:
Alignm length: 242
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 145

Conread position: 371-578
Cow position:
Alignm length: 216
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 167

Conread position: 371-677
Cow position:
Alignm length: 317
Alignm identity: 217
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 150

Conread position: 371-729
Cow position:
Alignm length: 371
Alignm identity: 251
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 18, 101

Conread position: 371-729
Cow position:
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 23

Conread position: 371-732
Cow position:
Alignm length: 376
Alignm identity: 243
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 138, 19

Conread position: 372-728
Cow position:
Alignm length: 370
Alignm identity: 260
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 200

Conread position: 372-728
Cow position:
Alignm length: 375
Alignm identity: 258
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 172

Conread position: 372-732
Cow position:
Alignm length: 368
Alignm identity: 237
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 19, 45

Conread position: 373-718
Cow position:
Alignm length: 348
Alignm identity: 221
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 172, 18

Conread position: 373-724
Cow position:
Alignm length: 365
Alignm identity: 236
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 21

Conread position: 373-732
Cow position:
Alignm length: 368
Alignm identity: 263
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 101

Conread position: 374-732
Cow position:
Alignm length: 370
Alignm identity: 247
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 107, 16

Conread position: 375-730
Cow position:
Alignm length: 365
Alignm identity: 239
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 129, 20

Conread position: 375-732
Cow position:
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 102

Conread position: 376-718
Cow position:
Alignm length: 345
Alignm identity: 238
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 88, 94

Conread position: 378-693
Cow position:
Alignm length: 321
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 117, 152

Conread position: 380-640
Cow position:
Alignm length: 271
Alignm identity: 181
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 113, 70

Conread position: 380-732
Cow position:
Alignm length: 371
Alignm identity: 247
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 76

Conread position: 382-529
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 136, 0

Conread position: 383-604
Cow position:
Alignm length: 224
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 139, 12

Conread position: 383-634
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 125, 134

Conread position: 383-725
Cow position:
Alignm length: 352
Alignm identity: 238
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 86, 20

Conread position: 383-728
Cow position:
Alignm length: 347
Alignm identity: 231
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 259, 80

Conread position: 383-732
Cow position:
Alignm length: 357
Alignm identity: 235
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 125, 69

Conread position: 384-713
Cow position:
Alignm length: 337
Alignm identity: 223
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 120

Conread position: 385-728
Cow position:
Alignm length: 354
Alignm identity: 234
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 12, 38

Conread position: 385-732
Cow position:
Alignm length: 353
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 89

Conread position: 386-728
Cow position:
Alignm length: 351
Alignm identity: 237
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 5, 97

Conread position: 387-523
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 53

Conread position: 387-593
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 102, 145

Conread position: 387-603
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 152

Conread position: 387-617
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 24

Conread position: 387-640
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 116, 33

Conread position: 387-661
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 101

Conread position: 387-661
Cow position:
Alignm length: 277
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 256, 22

Conread position: 387-665
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 33

Conread position: 387-679
Cow position:
Alignm length: 294
Alignm identity: 198
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 158, 68

Conread position: 387-697
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 122, 150

Conread position: 387-703
Cow position:
Alignm length: 336
Alignm identity: 228
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 88, 71

Conread position: 387-706
Cow position:
Alignm length: 331
Alignm identity: 215
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 144

Conread position: 387-730
Cow position:
Alignm length: 356
Alignm identity: 249
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 37, 9

Conread position: 387-732
Cow position:
Alignm length: 356
Alignm identity: 234
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 154

Conread position: 387-732
Cow position:
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 170

Conread position: 387-732
Cow position:
Alignm length: 350
Alignm identity: 242
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 200, 74

Conread position: 387-732
Cow position:
Alignm length: 352
Alignm identity: 239
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 100, 35

Conread position: 389-716
Cow position:
Alignm length: 336
Alignm identity: 212
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 116, 10

Conread position: 389-725
Cow position:
Alignm length: 343
Alignm identity: 228
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 114

Conread position: 390-732
Cow position:
Alignm length: 349
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 139

Conread position: 391-701
Cow position:
Alignm length: 317
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 103, 146

Conread position: 391-732
Cow position:
Alignm length: 343
Alignm identity: 230
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 255, 71

Conread position: 395-730
Cow position:
Alignm length: 344
Alignm identity: 235
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 96, 16

Conread position: 396-729
Cow position:
Alignm length: 343
Alignm identity: 236
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 93, 58

Conread position: 397-728
Cow position:
Alignm length: 332
Alignm identity: 218
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 399-649
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 127, 70

Conread position: 400-729
Cow position:
Alignm length: 339
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 152

Conread position: 400-732
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 109, 65

Conread position: 405-708
Cow position:
Alignm length: 310
Alignm identity: 204
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 230, 84

Conread position: 405-725
Cow position:
Alignm length: 326
Alignm identity: 214
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 114, 0

Conread position: 405-732
Cow position:
Alignm length: 337
Alignm identity: 235
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 91, 63

Conread position: 405-732
Cow position:
Alignm length: 334
Alignm identity: 227
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 94, 28

Conread position: 406-732
Cow position:
Alignm length: 328
Alignm identity: 213
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 231, 32

Conread position: 408-686
Cow position:
Alignm length: 287
Alignm identity: 204
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 96, 133

Conread position: 408-724
Cow position:
Alignm length: 324
Alignm identity: 204
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 57, 33

Conread position: 408-724
Cow position:
Alignm length: 319
Alignm identity: 211
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 150, 88

Conread position: 409-730
Cow position:
Alignm length: 327
Alignm identity: 205
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 44

Conread position: 410-660
Cow position:
Alignm length: 252
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 195, 80

Conread position: 413-732
Cow position:
Alignm length: 322
Alignm identity: 221
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 101, 95

Conread position: 413-732
Cow position:
Alignm length: 331
Alignm identity: 218
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 25, 59

Conread position: 414-699
Cow position:
Alignm length: 291
Alignm identity: 188
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 31

Conread position: 414-724
Cow position:
Alignm length: 318
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 414-725
Cow position:
Alignm length: 314
Alignm identity: 200
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 95

Conread position: 422-717
Cow position:
Alignm length: 307
Alignm identity: 209
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 81, 114

Conread position: 422-728
Cow position:
Alignm length: 312
Alignm identity: 201
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 186, 88

Conread position: 422-732
Cow position:
Alignm length: 314
Alignm identity: 202
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 110, 87

Conread position: 430-729
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 59, 12

Conread position: 432-720
Cow position:
Alignm length: 295
Alignm identity: 194
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 95

Conread position: 437-732
Cow position:
Alignm length: 302
Alignm identity: 203
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 56, 45

Conread position: 438-724
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 53, 105

Conread position: 439-729
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 52, 97

Conread position: 442-698
Cow position:
Alignm length: 262
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 134

Conread position: 452-732
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 35

Conread position: 471-725
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 47

Conread position: 471-732
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 52

Conread position: 492-726
Cow position:
Alignm length: 236
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 154, 49

Conread position: 502-701
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 27

Conread position: 503-710
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 143, 30

Conread position: 503-725
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 112

Conread position: 503-728
Cow position:
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 222

Conread position: 503-732
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 194, 8

Conread position: 503-732
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 44, 114

Conread position: 515-727
Cow position:
Alignm length: 218
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 43

Conread position: 542-718
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 546-729
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 77

Conread position: 554-728
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 151

Conread position: 556-732
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 89, 20

Conread position: 557-722
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 88, 31

Conread position: 557-724
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 69

Conread position: 562-688
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 46

Conread position: 562-722
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 562-724
Cow position:
Alignm length: 164
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 567-701
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 69, 0

Conread position: 569-726
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 154, 72

Conread position: 571-730
Cow position:
Alignm length: 161
Alignm identity: 115
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 68, 5

Conread position: 593-729
Cow position:
Alignm length: 137
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 593-732
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 600-732
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 609-722
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 609-732
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 7

Conread position: 611-732
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 80

Conread position: 613-729
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.