Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8031H19.3 |
| Conread position: | 298-703 |
| Cow position: | chr21:20572828-20573224 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 325-721 |
| Cow position: | chr21:22865379-22864988 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 329-732 |
| Cow position: | chr21:39420045-39420447 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 176, 28 |
| Conread position: | 332-723 |
| Cow position: | chr21:13902542-13902139 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 77 |
| Conread position: | 340-636 |
| Cow position: | chr21:20149001-20148689 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 23, 230 |
| Conread position: | 344-644 |
| Cow position: | chr21:20185829-20185521 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 186 |
| Conread position: | 346-596 |
| Cow position: | chr21:23827051-23827300 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 125, 13 |
| Conread position: | 346-732 |
| Cow position: | chr21:40725615-40725990 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 347-732 |
| Cow position: | chr21:11878295-11877911 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 22, 135 |
| Conread position: | 350-732 |
| Cow position: | chr21:4136673-4137032 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 356-732 |
| Cow position: | chr21:12781956-12782323 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 21 |
| Conread position: | 358-529 |
| Cow position: | chr21:24145014-24144833 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 358-728 |
| Cow position: | chr21:43260492-43260113 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 359-732 |
| Cow position: | chr21:38240454-38240815 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 360-667 |
| Cow position: | chr21:4469269-4468953 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 360-721 |
| Cow position: | chr21:14911091-14911462 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 29, 187 |
| Conread position: | 361-533 |
| Cow position: | chr21:26146154-26145972 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 364-728 |
| Cow position: | chr21:4860911-4861269 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 11, 107 |
| Conread position: | 364-732 |
| Cow position: | chr21:6298144-6297777 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 366-507 |
| Cow position: | chr21:48641345-48641201 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 136 |
| Conread position: | 366-732 |
| Cow position: | chr21:48314440-48314793 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 12 |
| Conread position: | 367-616 |
| Cow position: | chr21:38919284-38919026 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 170 |
| Conread position: | 369-603 |
| Cow position: | chr21:4428268-4428032 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 145 |
| Conread position: | 371-578 |
| Cow position: | chr21:39939953-39940165 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 167 |
| Conread position: | 371-677 |
| Cow position: | chr21:788435-788747 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 21, 150 |
| Conread position: | 371-729 |
| Cow position: | chr21:17257964-17258326 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 371-729 |
| Cow position: | chr21:18052120-18052477 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 23 |
| Conread position: | 371-732 |
| Cow position: | chr21:13287667-13287309 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 138, 19 |
| Conread position: | 372-728 |
| Cow position: | chr21:14726417-14726063 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 15, 200 |
| Conread position: | 372-728 |
| Cow position: | chr21:31707255-31706885 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 258 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 21, 172 |
| Conread position: | 372-732 |
| Cow position: | chr21:12625342-12625689 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 373-718 |
| Cow position: | chr21:15944661-15944324 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 172, 18 |
| Conread position: | 373-724 |
| Cow position: | chr21:46967347-46967704 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 373-732 |
| Cow position: | chr21:3605513-3605175 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 374-732 |
| Cow position: | chr21:21046943-21046592 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 107, 16 |
| Conread position: | 375-730 |
| Cow position: | chr21:15319456-15319803 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 129, 20 |
| Conread position: | 375-732 |
| Cow position: | chr21:29634768-29634416 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 102 |
| Conread position: | 376-718 |
| Cow position: | chr21:36399885-36399552 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 88, 94 |
| Conread position: | 378-693 |
| Cow position: | chr21:48880341-48880022 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 117, 152 |
| Conread position: | 380-640 |
| Cow position: | chr21:19550781-19551050 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 113, 70 |
| Conread position: | 380-732 |
| Cow position: | chr21:43351724-43352086 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 382-529 |
| Cow position: | chr21:17869408-17869556 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 383-604 |
| Cow position: | chr21:35171374-35171156 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 139, 12 |
| Conread position: | 383-634 |
| Cow position: | chr21:35150591-35150339 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 125, 134 |
| Conread position: | 383-725 |
| Cow position: | chr21:43321043-43320702 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 383-728 |
| Cow position: | chr21:37646404-37646740 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 259, 80 |
| Conread position: | 383-732 |
| Cow position: | chr21:42633479-42633828 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 125, 69 |
| Conread position: | 384-713 |
| Cow position: | chr21:19297560-19297235 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 120 |
| Conread position: | 385-728 |
| Cow position: | chr21:26255219-26254879 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 385-732 |
| Cow position: | chr21:876584-876238 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 89 |
| Conread position: | 386-728 |
| Cow position: | chr21:45353216-45352870 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 5, 97 |
| Conread position: | 387-523 |
| Cow position: | chr21:17727194-17727048 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 53 |
| Conread position: | 387-593 |
| Cow position: | chr21:47332333-47332127 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 102, 145 |
| Conread position: | 387-603 |
| Cow position: | chr21:31758928-31758706 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 387-617 |
| Cow position: | chr21:35209482-35209714 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 24 |
| Conread position: | 387-640 |
| Cow position: | chr21:23190326-23190069 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 116, 33 |
| Conread position: | 387-661 |
| Cow position: | chr21:23131875-23131609 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 101 |
| Conread position: | 387-661 |
| Cow position: | chr21:30014312-30014571 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 256, 22 |
| Conread position: | 387-665 |
| Cow position: | chr21:47930574-47930286 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 387-679 |
| Cow position: | chr21:46884165-46883894 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 158, 68 |
| Conread position: | 387-697 |
| Cow position: | chr21:6964310-6964002 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 122, 150 |
| Conread position: | 387-703 |
| Cow position: | chr21:17053304-17053631 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 88, 71 |
| Conread position: | 387-706 |
| Cow position: | chr21:46136940-46136617 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 144 |
| Conread position: | 387-730 |
| Cow position: | chr21:13534102-13533759 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 387-732 |
| Cow position: | chr21:20547970-20547628 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 108, 154 |
| Conread position: | 387-732 |
| Cow position: | chr21:22370393-22370746 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 170 |
| Conread position: | 387-732 |
| Cow position: | chr21:36358267-36357945 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 200, 74 |
| Conread position: | 387-732 |
| Cow position: | chr21:47343424-47343081 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 100, 35 |
| Conread position: | 389-716 |
| Cow position: | chr21:39413473-39413804 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 116, 10 |
| Conread position: | 389-725 |
| Cow position: | chr21:23658708-23658371 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 8, 114 |
| Conread position: | 390-732 |
| Cow position: | chr21:8220018-8219675 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 139 |
| Conread position: | 391-701 |
| Cow position: | chr21:31219614-31219927 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 146 |
| Conread position: | 391-732 |
| Cow position: | chr21:35355436-35355756 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 255, 71 |
| Conread position: | 395-730 |
| Cow position: | chr21:15276486-15276148 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 96, 16 |
| Conread position: | 396-729 |
| Cow position: | chr21:2158255-2157923 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 93, 58 |
| Conread position: | 397-728 |
| Cow position: | chr21:12466495-12466180 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 399-649 |
| Cow position: | chr21:15776718-15776961 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 127, 70 |
| Conread position: | 400-729 |
| Cow position: | chr21:2125278-2125612 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 97, 152 |
| Conread position: | 400-732 |
| Cow position: | chr21:12507547-12507232 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 109, 65 |
| Conread position: | 405-708 |
| Cow position: | chr21:28467631-28467936 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 230, 84 |
| Conread position: | 405-725 |
| Cow position: | chr21:16981723-16981398 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 405-732 |
| Cow position: | chr21:9732451-9732782 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 91, 63 |
| Conread position: | 405-732 |
| Cow position: | chr21:37191104-37191416 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 94, 28 |
| Conread position: | 406-732 |
| Cow position: | chr21:23675466-23675155 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 231, 32 |
| Conread position: | 408-686 |
| Cow position: | chr21:77712-77995 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 96, 133 |
| Conread position: | 408-724 |
| Cow position: | chr21:13276027-13275709 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 57, 33 |
| Conread position: | 408-724 |
| Cow position: | chr21:25630887-25630583 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 150, 88 |
| Conread position: | 409-730 |
| Cow position: | chr21:34618529-34618209 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 44 |
| Conread position: | 410-660 |
| Cow position: | chr21:1792902-1793146 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 195, 80 |
| Conread position: | 413-732 |
| Cow position: | chr21:29907618-29907930 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 101, 95 |
| Conread position: | 413-732 |
| Cow position: | chr21:40178535-40178210 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 25, 59 |
| Conread position: | 414-699 |
| Cow position: | chr21:5592838-5593122 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 414-724 |
| Cow position: | chr21:19623542-19623225 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 414-725 |
| Cow position: | chr21:42907902-42908205 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 95 |
| Conread position: | 422-717 |
| Cow position: | chr21:18290435-18290138 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 81, 114 |
| Conread position: | 422-728 |
| Cow position: | chr21:16993141-16993444 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 186, 88 |
| Conread position: | 422-732 |
| Cow position: | chr21:36070135-36070446 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 110, 87 |
| Conread position: | 430-729 |
| Cow position: | chr21:31998125-31997819 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 59, 12 |
| Conread position: | 432-720 |
| Cow position: | chr21:11326498-11326785 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 95 |
| Conread position: | 437-732 |
| Cow position: | chr21:46054753-46054460 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 56, 45 |
| Conread position: | 438-724 |
| Cow position: | chr21:39080920-39081217 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 53, 105 |
| Conread position: | 439-729 |
| Cow position: | chr21:27355562-27355275 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 52, 97 |
| Conread position: | 442-698 |
| Cow position: | chr21:35643045-35643305 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 134 |
| Conread position: | 452-732 |
| Cow position: | chr21:44192859-44193135 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 35 |
| Conread position: | 471-725 |
| Cow position: | chr21:29654023-29653764 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 471-732 |
| Cow position: | chr21:13531810-13532068 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 52 |
| Conread position: | 492-726 |
| Cow position: | chr21:6956115-6956344 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 154, 49 |
| Conread position: | 502-701 |
| Cow position: | chr21:14593844-14593646 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 140, 27 |
| Conread position: | 503-710 |
| Cow position: | chr21:14983389-14983593 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 143, 30 |
| Conread position: | 503-725 |
| Cow position: | chr21:21033666-21033440 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 112 |
| Conread position: | 503-728 |
| Cow position: | chr21:34350743-34350509 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 222 |
| Conread position: | 503-732 |
| Cow position: | chr21:34345758-34345991 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 194, 8 |
| Conread position: | 503-732 |
| Cow position: | chr21:34511191-34511421 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 44, 114 |
| Conread position: | 515-727 |
| Cow position: | chr21:14303148-14302932 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 43 |
| Conread position: | 542-718 |
| Cow position: | chr21:23970830-23971001 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 546-729 |
| Cow position: | chr21:15913649-15913467 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 94, 77 |
| Conread position: | 554-728 |
| Cow position: | chr21:25736140-25735965 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 151 |
| Conread position: | 556-732 |
| Cow position: | chr21:4594608-4594777 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 89, 20 |
| Conread position: | 557-722 |
| Cow position: | chr21:10959823-10959986 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 88, 31 |
| Conread position: | 557-724 |
| Cow position: | chr21:19651774-19651939 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 101, 69 |
| Conread position: | 562-688 |
| Cow position: | chr21:2138477-2138602 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 562-722 |
| Cow position: | chr21:20315962-20315801 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 562-724 |
| Cow position: | chr21:29078576-29078739 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 567-701 |
| Cow position: | chr21:20234288-20234424 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 569-726 |
| Cow position: | chr21:30835783-30835627 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 154, 72 |
| Conread position: | 571-730 |
| Cow position: | chr21:27551477-27551635 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 68, 5 |
| Conread position: | 593-729 |
| Cow position: | chr21:36688104-36688238 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 593-732 |
| Cow position: | chr21:9399036-9398894 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 600-732 |
| Cow position: | chr21:7227084-7227218 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 609-722 |
| Cow position: | chr21:42705497-42705611 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 609-732 |
| Cow position: | chr21:26865386-26865262 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 7 |
| Conread position: | 611-732 |
| Cow position: | chr21:30265000-30265121 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 613-729 |
| Cow position: | chr21:22098608-22098492 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.