Cow genome map
Conread name: | Ss1.1-Pig4-TMW8031H19.3 |
Conread position: | 322-732 |
Cow position: | chr27:21336744-21336329 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 42 |
Conread position: | 360-718 |
Cow position: | chr27:15423824-15424189 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 257 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 51, 11 |
Conread position: | 362-732 |
Cow position: | chr27:10158861-10158496 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 249 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 17, 132 |
Conread position: | 362-732 |
Cow position: | chr27:11633782-11634175 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 267 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 30, 241 |
Conread position: | 365-714 |
Cow position: | chr27:12761778-12761442 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 243 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 29, 46 |
Conread position: | 365-722 |
Cow position: | chr27:7278562-7278188 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 250 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 372-530 |
Cow position: | chr27:23793363-23793527 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 14, 40 |
Conread position: | 372-729 |
Cow position: | chr27:2882831-2882471 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 52 |
Conread position: | 374-724 |
Cow position: | chr27:27582555-27582203 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 247 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 17, 47 |
Conread position: | 377-682 |
Cow position: | chr27:23281799-23282097 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 202 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 28, 18 |
Conread position: | 377-728 |
Cow position: | chr27:15198664-15199032 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 253 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 17, 263 |
Conread position: | 379-732 |
Cow position: | chr27:19015342-19014991 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 242 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 9, 67 |
Conread position: | 383-682 |
Cow position: | chr27:15760993-15761294 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 215 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 126, 150 |
Conread position: | 383-724 |
Cow position: | chr27:16493023-16493359 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 238 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 107, 12 |
Conread position: | 383-727 |
Cow position: | chr27:23234161-23233817 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 225 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 69, 39 |
Conread position: | 383-729 |
Cow position: | chr27:15509588-15509236 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 37 |
Conread position: | 383-732 |
Cow position: | chr27:11325672-11326008 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 241 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 98, 34 |
Conread position: | 387-664 |
Cow position: | chr27:9921584-9921856 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 196 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 94, 151 |
Conread position: | 387-670 |
Cow position: | chr27:7587556-7587834 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 195 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 69, 109 |
Conread position: | 387-686 |
Cow position: | chr27:24130473-24130771 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 203 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 52, 75 |
Conread position: | 387-714 |
Cow position: | chr27:21857896-21858220 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 214 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 104, 123 |
Conread position: | 387-723 |
Cow position: | chr27:6144328-6144661 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 235 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 117, 47 |
Conread position: | 387-729 |
Cow position: | chr27:23228090-23228424 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 229 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 65, 82 |
Conread position: | 387-732 |
Cow position: | chr27:9085032-9085369 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 233 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 46, 129 |
Conread position: | 387-732 |
Cow position: | chr27:29047189-29046867 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 240 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 390-720 |
Cow position: | chr27:4873191-4873514 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 233 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 116, 75 |
Conread position: | 390-725 |
Cow position: | chr27:3204008-3203667 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 231 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 69, 30 |
Conread position: | 390-728 |
Cow position: | chr27:14870600-14870250 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 171 |
Conread position: | 390-732 |
Cow position: | chr27:9437111-9436765 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 30 |
Conread position: | 390-732 |
Cow position: | chr27:21103663-21103336 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 232 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 109, 44 |
Conread position: | 395-713 |
Cow position: | chr27:12983026-12983332 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 221 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 63, 95 |
Conread position: | 395-719 |
Cow position: | chr27:27629459-27629777 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 224 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 101, 74 |
Conread position: | 395-724 |
Cow position: | chr27:525012-525341 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 216 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 105, 132 |
Conread position: | 400-604 |
Cow position: | chr27:19389907-19390113 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 148 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 109, 59 |
Conread position: | 402-732 |
Cow position: | chr27:25010005-25010328 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 218 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 75, 54 |
Conread position: | 405-730 |
Cow position: | chr27:11272483-11272801 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 230 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 103, 64 |
Conread position: | 405-732 |
Cow position: | chr27:9279061-9279384 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 215 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 6, 77 |
Conread position: | 413-732 |
Cow position: | chr27:17438478-17438803 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 220 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 64, 152 |
Conread position: | 419-669 |
Cow position: | chr27:17899128-17898872 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 174 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 88, 177 |
Conread position: | 428-732 |
Cow position: | chr27:24066619-24066315 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 207 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 81, 13 |
Conread position: | 442-729 |
Cow position: | chr27:19658176-19658473 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 193 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 59, 42 |
Conread position: | 454-730 |
Cow position: | chr27:16215999-16216264 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 186 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 38, 15 |
Conread position: | 480-732 |
Cow position: | chr27:28895928-28895676 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 175 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 46, 32 |
Conread position: | 492-732 |
Cow position: | chr27:19627316-19627082 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 164 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 44, 33 |
Conread position: | 498-728 |
Cow position: | chr27:23739063-23739291 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 167 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 102, 31 |
Conread position: | 544-728 |
Cow position: | chr27:15468043-15468225 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 131 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 9, 45 |
Conread position: | 559-726 |
Cow position: | chr27:11659247-11659414 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 128 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 16, 32 |
Conread position: | 565-724 |
Cow position: | chr27:190747-190904 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 117 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 80, 19 |
Conread position: | 565-732 |
Cow position: | chr27:12177218-12177053 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 120 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 569-732 |
Cow position: | chr27:441383-441545 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 73, 148 |
Conread position: | 587-732 |
Cow position: | chr27:19390595-19390743 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 589-726 |
Cow position: | chr27:7418827-7418689 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 56, 128 |
Conread position: | 592-724 |
Cow position: | chr27:3531260-3531393 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 100 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 593-730 |
Cow position: | chr27:17049354-17049493 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 593-732 |
Cow position: | chr27:7749111-7748970 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.