Cow genome map

Conread name: Ss1.1-Pig4-TMW8031H19.3

Conread position: 322-732
Cow position: chr27:21336744-21336329 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 42

Conread position: 360-718
Cow position: chr27:15423824-15424189 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 11

Conread position: 362-732
Cow position: chr27:10158861-10158496 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 249
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 17, 132

Conread position: 362-732
Cow position: chr27:11633782-11634175 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 30, 241

Conread position: 365-714
Cow position: chr27:12761778-12761442 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 29, 46

Conread position: 365-722
Cow position: chr27:7278562-7278188 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 55, 0

Conread position: 372-530
Cow position: chr27:23793363-23793527 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 40

Conread position: 372-729
Cow position: chr27:2882831-2882471 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 52

Conread position: 374-724
Cow position: chr27:27582555-27582203 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 247
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 17, 47

Conread position: 377-682
Cow position: chr27:23281799-23282097 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 18

Conread position: 377-728
Cow position: chr27:15198664-15199032 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 263

Conread position: 379-732
Cow position: chr27:19015342-19014991 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 242
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 9, 67

Conread position: 383-682
Cow position: chr27:15760993-15761294 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 126, 150

Conread position: 383-724
Cow position: chr27:16493023-16493359 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 107, 12

Conread position: 383-727
Cow position: chr27:23234161-23233817 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 225
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 39

Conread position: 383-729
Cow position: chr27:15509588-15509236 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 37

Conread position: 383-732
Cow position: chr27:11325672-11326008 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 34

Conread position: 387-664
Cow position: chr27:9921584-9921856 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 94, 151

Conread position: 387-670
Cow position: chr27:7587556-7587834 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 69, 109

Conread position: 387-686
Cow position: chr27:24130473-24130771 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 75

Conread position: 387-714
Cow position: chr27:21857896-21858220 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 214
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 123

Conread position: 387-723
Cow position: chr27:6144328-6144661 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 117, 47

Conread position: 387-729
Cow position: chr27:23228090-23228424 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 229
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 65, 82

Conread position: 387-732
Cow position: chr27:9085032-9085369 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 129

Conread position: 387-732
Cow position: chr27:29047189-29046867 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 73, 0

Conread position: 390-720
Cow position: chr27:4873191-4873514 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 233
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 116, 75

Conread position: 390-725
Cow position: chr27:3204008-3203667 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 69, 30

Conread position: 390-728
Cow position: chr27:14870600-14870250 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 171

Conread position: 390-732
Cow position: chr27:9437111-9436765 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 30

Conread position: 390-732
Cow position: chr27:21103663-21103336 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 109, 44

Conread position: 395-713
Cow position: chr27:12983026-12983332 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 63, 95

Conread position: 395-719
Cow position: chr27:27629459-27629777 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 224
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 101, 74

Conread position: 395-724
Cow position: chr27:525012-525341 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 216
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 105, 132

Conread position: 400-604
Cow position: chr27:19389907-19390113 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 109, 59

Conread position: 402-732
Cow position: chr27:25010005-25010328 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 218
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 75, 54

Conread position: 405-730
Cow position: chr27:11272483-11272801 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 230
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 103, 64

Conread position: 405-732
Cow position: chr27:9279061-9279384 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 215
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 6, 77

Conread position: 413-732
Cow position: chr27:17438478-17438803 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 152

Conread position: 419-669
Cow position: chr27:17899128-17898872 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 177

Conread position: 428-732
Cow position: chr27:24066619-24066315 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 13

Conread position: 442-729
Cow position: chr27:19658176-19658473 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 193
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 59, 42

Conread position: 454-730
Cow position: chr27:16215999-16216264 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 38, 15

Conread position: 480-732
Cow position: chr27:28895928-28895676 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 32

Conread position: 492-732
Cow position: chr27:19627316-19627082 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 33

Conread position: 498-728
Cow position: chr27:23739063-23739291 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 31

Conread position: 544-728
Cow position: chr27:15468043-15468225 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 45

Conread position: 559-726
Cow position: chr27:11659247-11659414 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 32

Conread position: 565-724
Cow position: chr27:190747-190904 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 80, 19

Conread position: 565-732
Cow position: chr27:12177218-12177053 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 569-732
Cow position: chr27:441383-441545 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 148

Conread position: 587-732
Cow position: chr27:19390595-19390743 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 589-726
Cow position: chr27:7418827-7418689 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 128

Conread position: 592-724
Cow position: chr27:3531260-3531393 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 593-730
Cow position: chr27:17049354-17049493 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 593-732
Cow position: chr27:7749111-7748970 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Show alignments to all cow chromosomes.