Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8031H19.3
        

               Conread position:
               318-703
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 64
               

               Conread position:
               325-729
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 6
               

               Conread position:
               332-700
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               25, 68
               

               Conread position:
               346-732
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               349-729
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               357-729
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               243
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               34, 81
               

               Conread position:
               359-726
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               359-730
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               264
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               35, 119
               

               Conread position:
               364-729
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 73
               

               Conread position:
               365-617
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               365-721
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               255
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               365-732
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               137, 194
               

               Conread position:
               365-732
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               365-732
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               135, 26
               

               Conread position:
               366-701
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               23, 42
               

               Conread position:
               366-732
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 29
               

               Conread position:
               367-726
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               370-673
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               371-642
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 50
               

               Conread position:
               371-688
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               117, 23
               

               Conread position:
               371-725
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               371-729
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               23, 18
               

               Conread position:
               371-729
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               120, 165
               

               Conread position:
               372-732
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               372-732
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               117, 48
               

               Conread position:
               373-732
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 144
               

               Conread position:
               374-720
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               120, 16
               

               Conread position:
               374-724
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               374-724
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               20, 47
               

               Conread position:
               374-732
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               375-732
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               70, 19
               

               Conread position:
               377-718
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               149, 135
               

               Conread position:
               377-732
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               377-732
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               127, 6
               

               Conread position:
               382-730
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               111, 87
               

               Conread position:
               383-721
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 154
               

               Conread position:
               383-728
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               126, 103
               

               Conread position:
               383-728
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 153
               

               Conread position:
               383-732
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               223, 12
               

               Conread position:
               383-732
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 37
               

               Conread position:
               383-732
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               121, 16
               

               Conread position:
               383-732
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               107, 24
               

               Conread position:
               384-721
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               110, 7
               

               Conread position:
               384-728
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               105, 7
               

               Conread position:
               387-603
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               138, 15
               

               Conread position:
               387-645
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               122, 33
               

               Conread position:
               387-718
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               105, 155
               

               Conread position:
               387-725
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               117, 40
               

               Conread position:
               387-729
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               21, 32
               

               Conread position:
               387-732
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               148, 33
               

               Conread position:
               387-732
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               167, 22
               

               Conread position:
               387-732
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 92
               

               Conread position:
               387-732
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 15
               

               Conread position:
               387-732
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               121, 33
               

               Conread position:
               388-723
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               112, 24
               

               Conread position:
               390-727
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               119, 142
               

               Conread position:
               390-732
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 75
               

               Conread position:
               390-732
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               34, 82
               

               Conread position:
               391-700
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               27, 5
               

               Conread position:
               391-714
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               105, 139
               

               Conread position:
               391-726
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               41, 147
               

               Conread position:
               396-725
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               92, 37
               

               Conread position:
               396-732
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               100, 140
               

               Conread position:
               398-644
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               189, 78
               

               Conread position:
               400-726
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               145, 70
               

               Conread position:
               405-705
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               97, 48
               

               Conread position:
               405-707
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               102, 91
               

               Conread position:
               405-729
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               213, 36
               

               Conread position:
               410-693
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               80, 47
               

               Conread position:
               435-664
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               68, 140
               

               Conread position:
               436-732
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               437-732
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 71
               

               Conread position:
               441-716
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               80, 103
               

               Conread position:
               445-729
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               75, 20
               

               Conread position:
               478-732
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               503-712
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               144, 26
               

               Conread position:
               504-726
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               61, 12
               

               Conread position:
               505-732
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               141, 26
               

               Conread position:
               506-732
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               43, 140
               

               Conread position:
               507-732
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               140, 45
               

               Conread position:
               529-726
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               116, 11
               

               Conread position:
               541-724
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               104, 16
               

               Conread position:
               541-732
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               104, 67
               

               Conread position:
               543-729
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 118
               

               Conread position:
               546-729
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               100, 51
               

               Conread position:
               546-731
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               546-732
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               99, 6
               

               Conread position:
               546-732
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               547-732
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               548-716
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 19
               

               Conread position:
               553-732
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               555-725
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               90, 74
               

               Conread position:
               557-730
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               94, 110
               

               Conread position:
               557-730
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 143
               

               Conread position:
               564-732
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               81, 117
               

               Conread position:
               566-731
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               569-728
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               77, 89
               

               Conread position:
               571-732
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               572-732
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 94
               

               Conread position:
               576-724
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               69, 78
               

               Conread position:
               576-732
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 145
               

               Conread position:
               586-725
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 109
               

               Conread position:
               612-732
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               613-732
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               621-732
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 60
               
Show alignments to all cow chromosomes.