Cow genome map

Conread name: Ss1.1-Pig4-TMW8031H19.3

Conread position: 346-662
Cow position: chr29:20922509-20922832 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 205
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 78

Conread position: 353-696
Cow position: chr29:30069820-30069488 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 154

Conread position: 356-732
Cow position: chr29:9097232-9096848 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 132

Conread position: 356-732
Cow position: chr29:37675092-37675471 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 258
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 47

Conread position: 360-548
Cow position: chr29:31606102-31605905 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 95

Conread position: 364-732
Cow position: chr29:45467069-45466716 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 254
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 241, 30

Conread position: 365-619
Cow position: chr29:11601324-11601578 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 59

Conread position: 365-713
Cow position: chr29:19596123-19596482 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 7, 142

Conread position: 365-732
Cow position: chr29:31960634-31960264 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 77

Conread position: 369-732
Cow position: chr29:19616134-19616494 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 30, 25

Conread position: 371-705
Cow position: chr29:14497560-14497890 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 120, 11

Conread position: 371-726
Cow position: chr29:28999129-28998789 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 138, 27

Conread position: 371-728
Cow position: chr29:36541883-36541534 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 237
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 125, 92

Conread position: 372-705
Cow position: chr29:29622841-29622506 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 170

Conread position: 372-732
Cow position: chr29:36727995-36727632 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 247
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 37, 19

Conread position: 373-622
Cow position: chr29:28100852-28100604 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 48

Conread position: 373-732
Cow position: chr29:31345413-31345772 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 27, 18

Conread position: 374-701
Cow position: chr29:1599666-1599997 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 212
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 17

Conread position: 374-730
Cow position: chr29:5177798-5178163 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 229
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 32, 18

Conread position: 377-728
Cow position: chr29:34332069-34332423 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 22, 17

Conread position: 380-603
Cow position: chr29:17027795-17028035 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 383-599
Cow position: chr29:25059459-25059238 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 85

Conread position: 383-640
Cow position: chr29:6796808-6796547 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 15

Conread position: 383-696
Cow position: chr29:22286567-22286253 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 115, 164

Conread position: 383-703
Cow position: chr29:19546790-19547115 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 138, 64

Conread position: 383-709
Cow position: chr29:31904680-31905000 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 216
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 262, 58

Conread position: 383-724
Cow position: chr29:37306921-37307259 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 235
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 108, 129

Conread position: 383-732
Cow position: chr29:20970690-20971040 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 73, 164

Conread position: 383-732
Cow position: chr29:34449944-34450293 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 233
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 114, 79

Conread position: 385-603
Cow position: chr29:31950144-31949925 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 151

Conread position: 385-729
Cow position: chr29:7341870-7341516 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 237
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 128, 109

Conread position: 385-732
Cow position: chr29:1030365-1030030 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 244, 35

Conread position: 387-613
Cow position: chr29:38761815-38762046 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 387-696
Cow position: chr29:32196321-32196019 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 103, 82

Conread position: 387-720
Cow position: chr29:36299991-36299691 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 259, 33

Conread position: 387-724
Cow position: chr29:44419514-44419186 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 179, 120

Conread position: 387-732
Cow position: chr29:28206265-28205911 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 232
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 104, 153

Conread position: 387-732
Cow position: chr29:39576475-39576809 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 125, 43

Conread position: 388-627
Cow position: chr29:22585012-22585264 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 80, 34

Conread position: 390-726
Cow position: chr29:33128897-33128560 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 160

Conread position: 390-730
Cow position: chr29:33584160-33584502 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 149

Conread position: 391-593
Cow position: chr29:30690092-30690295 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 112, 29

Conread position: 391-644
Cow position: chr29:38735443-38735692 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 16

Conread position: 392-727
Cow position: chr29:13915924-13916252 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 76

Conread position: 392-732
Cow position: chr29:36410382-36410059 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 224
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 393-625
Cow position: chr29:36015907-36016141 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 98, 36

Conread position: 394-732
Cow position: chr29:12015768-12015429 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 59

Conread position: 395-727
Cow position: chr29:4336206-4335881 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 227
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 247, 69

Conread position: 396-729
Cow position: chr29:25699175-25698843 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 99, 125

Conread position: 400-729
Cow position: chr29:31642694-31642369 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 228
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 108, 139

Conread position: 400-732
Cow position: chr29:38859314-38858985 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 18, 120

Conread position: 402-722
Cow position: chr29:30193037-30193353 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 154

Conread position: 404-725
Cow position: chr29:5637048-5636719 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 132

Conread position: 405-723
Cow position: chr29:33548909-33549228 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 99, 135

Conread position: 406-732
Cow position: chr29:40465133-40464819 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 95

Conread position: 406-732
Cow position: chr29:42474625-42474301 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 214
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 133

Conread position: 412-728
Cow position: chr29:31156112-31156429 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 87, 57

Conread position: 422-723
Cow position: chr29:18115678-18115371 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 204
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 110

Conread position: 430-718
Cow position: chr29:2564743-2564468 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 49

Conread position: 434-730
Cow position: chr29:33616305-33616597 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 118

Conread position: 436-724
Cow position: chr29:31906557-31906267 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 191
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 104

Conread position: 437-730
Cow position: chr29:9510921-9511217 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 5

Conread position: 455-732
Cow position: chr29:31836462-31836182 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 186
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 66, 106

Conread position: 458-732
Cow position: chr29:22541373-22541106 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 84

Conread position: 461-732
Cow position: chr29:23541236-23541507 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 73

Conread position: 479-732
Cow position: chr29:42014668-42014413 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 44

Conread position: 480-725
Cow position: chr29:38485986-38485746 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 19

Conread position: 481-726
Cow position: chr29:323743-323994 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 29

Conread position: 500-728
Cow position: chr29:36192687-36192908 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 9

Conread position: 503-717
Cow position: chr29:14397397-14397609 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 28

Conread position: 503-728
Cow position: chr29:26217134-26216916 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 136, 30

Conread position: 503-729
Cow position: chr29:31377373-31377151 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 34

Conread position: 503-732
Cow position: chr29:34361444-34361664 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 143, 51

Conread position: 503-732
Cow position: chr29:36007848-36007625 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 533-732
Cow position: chr29:30515821-30516020 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 19

Conread position: 540-725
Cow position: chr29:19564570-19564753 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 19

Conread position: 546-721
Cow position: chr29:5029618-5029445 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 11

Conread position: 552-732
Cow position: chr29:36735553-36735375 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 554-729
Cow position: chr29:29900215-29900392 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 164

Conread position: 556-732
Cow position: chr29:19552296-19552121 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 30

Conread position: 562-724
Cow position: chr29:28190110-28190271 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 10

Conread position: 566-723
Cow position: chr29:16365112-16364952 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 566-729
Cow position: chr29:24745136-24744976 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 9

Conread position: 575-732
Cow position: chr29:20615843-20615685 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 84

Conread position: 577-730
Cow position: chr29:39656261-39656415 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 593-728
Cow position: chr29:24082403-24082272 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 40

Conread position: 622-732
Cow position: chr29:31050695-31050585 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 91

Show alignments to all cow chromosomes.