Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8031H19.3 |
| Conread position: | 1-732 |
| Cow position: | chr9:43319168-43319917 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 604 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 157 |
| Conread position: | 324-638 |
| Cow position: | chr9:35268708-35268378 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 117 |
| Conread position: | 337-728 |
| Cow position: | chr9:49753212-49753625 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 284 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 339-727 |
| Cow position: | chr9:43642399-43642773 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 345-732 |
| Cow position: | chr9:32613906-32613511 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 352-732 |
| Cow position: | chr9:47324703-47324336 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 353-732 |
| Cow position: | chr9:49150246-49150624 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 356-729 |
| Cow position: | chr9:55978092-55977720 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 28, 80 |
| Conread position: | 356-732 |
| Cow position: | chr9:34131440-34131814 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 87 |
| Conread position: | 359-718 |
| Cow position: | chr9:20330501-20330126 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 14, 129 |
| Conread position: | 359-721 |
| Cow position: | chr9:35816314-35815966 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 25 |
| Conread position: | 359-726 |
| Cow position: | chr9:43194706-43194333 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 134 |
| Conread position: | 360-725 |
| Cow position: | chr9:50560148-50559782 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 360-732 |
| Cow position: | chr9:19894540-19894913 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 264 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 360-732 |
| Cow position: | chr9:26073117-26073502 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 32, 100 |
| Conread position: | 361-713 |
| Cow position: | chr9:18236272-18236624 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 32, 190 |
| Conread position: | 362-732 |
| Cow position: | chr9:39200354-39199982 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 33 |
| Conread position: | 364-729 |
| Cow position: | chr9:58488125-58488490 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 125, 19 |
| Conread position: | 365-721 |
| Cow position: | chr9:22588557-22588930 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 365-725 |
| Cow position: | chr9:20383313-20383668 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 11, 174 |
| Conread position: | 365-728 |
| Cow position: | chr9:24632049-24631697 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 253 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 366-732 |
| Cow position: | chr9:23429321-23428961 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 24 |
| Conread position: | 368-584 |
| Cow position: | chr9:3708813-3709024 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 141, 83 |
| Conread position: | 370-628 |
| Cow position: | chr9:53790171-53790433 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 370-690 |
| Cow position: | chr9:34090475-34090146 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 173 |
| Conread position: | 370-728 |
| Cow position: | chr9:15927390-15927748 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 370-732 |
| Cow position: | chr9:27006455-27006100 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 94 |
| Conread position: | 371-489 |
| Cow position: | chr9:25010630-25010749 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 371-602 |
| Cow position: | chr9:43428551-43428318 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 138, 23 |
| Conread position: | 371-722 |
| Cow position: | chr9:55408350-55407989 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 21, 97 |
| Conread position: | 371-725 |
| Cow position: | chr9:20817938-20817599 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 371-725 |
| Cow position: | chr9:23856116-23855764 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 371-727 |
| Cow position: | chr9:11205915-11205553 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 372-732 |
| Cow position: | chr9:19902178-19902546 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 252 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 20, 168 |
| Conread position: | 372-732 |
| Cow position: | chr9:38419807-38419463 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 373-732 |
| Cow position: | chr9:23837622-23837268 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 376-717 |
| Cow position: | chr9:53054174-53054502 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 376-732 |
| Cow position: | chr9:21229416-21229068 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 145, 14 |
| Conread position: | 377-729 |
| Cow position: | chr9:51593030-51592685 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 225, 40 |
| Conread position: | 380-639 |
| Cow position: | chr9:3002902-3002636 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 168 |
| Conread position: | 382-728 |
| Cow position: | chr9:41527816-41527465 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 382-728 |
| Cow position: | chr9:46358683-46358338 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 107, 10 |
| Conread position: | 383-663 |
| Cow position: | chr9:35229393-35229677 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 122, 153 |
| Conread position: | 383-722 |
| Cow position: | chr9:19567429-19567770 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 113, 59 |
| Conread position: | 383-724 |
| Cow position: | chr9:47390210-47390551 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 264, 145 |
| Conread position: | 383-727 |
| Cow position: | chr9:56407985-56408306 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 262, 96 |
| Conread position: | 383-729 |
| Cow position: | chr9:47900793-47901136 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 144 |
| Conread position: | 384-706 |
| Cow position: | chr9:14798858-14798538 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 69 |
| Conread position: | 385-730 |
| Cow position: | chr9:34214740-34215074 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 132, 11 |
| Conread position: | 386-732 |
| Cow position: | chr9:3839065-3838730 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 387-493 |
| Cow position: | chr9:33409523-33409417 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 387-588 |
| Cow position: | chr9:7525262-7525061 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 122, 145 |
| Conread position: | 387-644 |
| Cow position: | chr9:54387534-54387279 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 60, 127 |
| Conread position: | 387-645 |
| Cow position: | chr9:17817612-17817370 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 387-656 |
| Cow position: | chr9:5692865-5692591 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 45, 152 |
| Conread position: | 387-691 |
| Cow position: | chr9:52775433-52775127 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 104, 169 |
| Conread position: | 387-706 |
| Cow position: | chr9:25020198-25020507 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 138, 78 |
| Conread position: | 387-721 |
| Cow position: | chr9:17368023-17368361 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 47 |
| Conread position: | 387-727 |
| Cow position: | chr9:32408285-32408638 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 238 |
| Conread position: | 387-729 |
| Cow position: | chr9:19508403-19508743 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 387-729 |
| Cow position: | chr9:19594375-19594045 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 387-730 |
| Cow position: | chr9:19068660-19068323 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 250, 121 |
| Conread position: | 387-732 |
| Cow position: | chr9:22180936-22180590 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 104, 68 |
| Conread position: | 387-732 |
| Cow position: | chr9:32606947-32606620 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 104, 37 |
| Conread position: | 388-727 |
| Cow position: | chr9:19709740-19710072 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 71 |
| Conread position: | 388-731 |
| Cow position: | chr9:14211231-14210897 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 77 |
| Conread position: | 388-731 |
| Cow position: | chr9:60818075-60818409 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 257, 23 |
| Conread position: | 390-669 |
| Cow position: | chr9:2026527-2026811 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 48, 79 |
| Conread position: | 390-689 |
| Cow position: | chr9:58456297-58456589 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 135, 20 |
| Conread position: | 390-718 |
| Cow position: | chr9:50785018-50784697 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 390-728 |
| Cow position: | chr9:6684854-6684516 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 119, 167 |
| Conread position: | 390-728 |
| Cow position: | chr9:22482281-22481954 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 94, 78 |
| Conread position: | 390-728 |
| Cow position: | chr9:31385555-31385894 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 108, 142 |
| Conread position: | 390-728 |
| Cow position: | chr9:47398726-47398398 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 71, 82 |
| Conread position: | 390-729 |
| Cow position: | chr9:54048541-54048869 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 138, 39 |
| Conread position: | 390-732 |
| Cow position: | chr9:7620266-7619937 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 390-732 |
| Cow position: | chr9:17354595-17354946 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 119, 30 |
| Conread position: | 392-643 |
| Cow position: | chr9:20082923-20082656 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 150 |
| Conread position: | 393-728 |
| Cow position: | chr9:39532036-39531706 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 113, 67 |
| Conread position: | 395-728 |
| Cow position: | chr9:22841304-22841634 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 396-721 |
| Cow position: | chr9:8744180-8743854 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 401-668 |
| Cow position: | chr9:56504042-56504316 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 108, 36 |
| Conread position: | 403-677 |
| Cow position: | chr9:21895492-21895758 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 138 |
| Conread position: | 405-723 |
| Cow position: | chr9:25699089-25698770 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 59, 66 |
| Conread position: | 405-724 |
| Cow position: | chr9:54932314-54932629 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 127, 15 |
| Conread position: | 405-725 |
| Cow position: | chr9:16010179-16010498 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 120, 79 |
| Conread position: | 409-726 |
| Cow position: | chr9:15986183-15985863 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 100, 148 |
| Conread position: | 411-702 |
| Cow position: | chr9:11155139-11154857 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 96, 9 |
| Conread position: | 415-732 |
| Cow position: | chr9:19535165-19535479 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 83, 121 |
| Conread position: | 422-732 |
| Cow position: | chr9:55883586-55883878 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 107, 91 |
| Conread position: | 435-674 |
| Cow position: | chr9:53999729-53999490 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 119 |
| Conread position: | 436-732 |
| Cow position: | chr9:25452515-25452818 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 40 |
| Conread position: | 439-718 |
| Cow position: | chr9:55566179-55566464 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 67, 97 |
| Conread position: | 444-722 |
| Cow position: | chr9:33002611-33002338 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 445-721 |
| Cow position: | chr9:32781046-32781331 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 452-732 |
| Cow position: | chr9:56577871-56577592 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 454-717 |
| Cow position: | chr9:45153148-45152882 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 474-721 |
| Cow position: | chr9:50345109-50344852 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 480-732 |
| Cow position: | chr9:23022750-23022505 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 51 |
| Conread position: | 492-723 |
| Cow position: | chr9:35249407-35249179 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 161, 53 |
| Conread position: | 503-707 |
| Cow position: | chr9:64048088-64048290 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 144, 35 |
| Conread position: | 503-723 |
| Cow position: | chr9:30727064-30727283 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 503-727 |
| Cow position: | chr9:25010810-25011028 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 142, 29 |
| Conread position: | 503-727 |
| Cow position: | chr9:42703229-42703452 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 127, 37 |
| Conread position: | 503-730 |
| Cow position: | chr9:16210519-16210295 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 105, 35 |
| Conread position: | 503-732 |
| Cow position: | chr9:56804521-56804294 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 508-723 |
| Cow position: | chr9:21688942-21689152 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 528-732 |
| Cow position: | chr9:16090405-16090607 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 117, 58 |
| Conread position: | 540-728 |
| Cow position: | chr9:37701339-37701152 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 106, 17 |
| Conread position: | 547-722 |
| Cow position: | chr9:48140091-48140263 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 550-722 |
| Cow position: | chr9:54987308-54987480 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 95, 166 |
| Conread position: | 550-727 |
| Cow position: | chr9:14298724-14298902 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 553-728 |
| Cow position: | chr9:27368655-27368831 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 6, 104 |
| Conread position: | 554-730 |
| Cow position: | chr9:55019232-55019060 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 92, 12 |
| Conread position: | 554-732 |
| Cow position: | chr9:54919448-54919631 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 574-725 |
| Cow position: | chr9:59411942-59411790 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 593-721 |
| Cow position: | chr9:32702720-32702591 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 601-730 |
| Cow position: | chr9:22758256-22758386 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 606-729 |
| Cow position: | chr9:29853429-29853551 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 609-725 |
| Cow position: | chr9:57793279-57793395 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 621-730 |
| Cow position: | chr9:20098085-20098196 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 622-732 |
| Cow position: | chr9:39582986-39583094 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 24, 5 |
Show alignments to all cow chromosomes.