Cow genome map

Conread name: Ss1.1-Pig4-TMW8031J08.3

Conread position: 1-127
Cow position:
Alignm length: 127
Alignm identity: 108
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-146
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 1-148
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position:
Alignm length: 152
Alignm identity: 124
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 1-183
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 1-197
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 1-205
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 159, 18

Conread position: 1-209
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 79, 0

Conread position: 1-231
Cow position:
Alignm length: 231
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 1-259
Cow position:
Alignm length: 261
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 1-280
Cow position:
Alignm length: 286
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 92, 43

Conread position: 1-292
Cow position:
Alignm length: 292
Alignm identity: 191
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 1-294
Cow position:
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 36

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 1-320
Cow position:
Alignm length: 321
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 227

Conread position: 1-323
Cow position:
Alignm length: 325
Alignm identity: 226
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 80, 162

Conread position: 1-325
Cow position:
Alignm length: 326
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 139

Conread position: 1-326
Cow position:
Alignm length: 329
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 50

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 334
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 85

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 80

Conread position: 1-326
Cow position:
Alignm length: 329
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 101

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 16

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 131

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 121

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 163

Conread position: 1-326
Cow position:
Alignm length: 326
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 171

Conread position: 1-326
Cow position:
Alignm length: 340
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 169

Conread position: 1-333
Cow position:
Alignm length: 339
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 1-333
Cow position:
Alignm length: 336
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 75

Conread position: 1-334
Cow position:
Alignm length: 337
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 142

Conread position: 1-335
Cow position:
Alignm length: 336
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 43

Conread position: 1-335
Cow position:
Alignm length: 338
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 63

Conread position: 1-358
Cow position:
Alignm length: 365
Alignm identity: 248
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 317, 75

Conread position: 1-364
Cow position:
Alignm length: 366
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 175

Conread position: 1-364
Cow position:
Alignm length: 365
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 133

Conread position: 1-364
Cow position:
Alignm length: 365
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 327

Conread position: 1-370
Cow position:
Alignm length: 375
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 54

Conread position: 1-392
Cow position:
Alignm length: 394
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 254

Conread position: 1-411
Cow position:
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 13

Conread position: 1-413
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 200

Conread position: 1-413
Cow position:
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 41

Conread position: 1-413
Cow position:
Alignm length: 420
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 50

Conread position: 1-425
Cow position:
Alignm length: 439
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 54

Conread position: 1-425
Cow position:
Alignm length: 438
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 58

Conread position: 1-427
Cow position:
Alignm length: 435
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 266

Conread position: 2-259
Cow position:
Alignm length: 259
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 84

Conread position: 2-300
Cow position:
Alignm length: 303
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 2-413
Cow position:
Alignm length: 421
Alignm identity: 280
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 26

Conread position: 3-204
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 65, 0

Conread position: 3-278
Cow position:
Alignm length: 280
Alignm identity: 182
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 28

Conread position: 3-397
Cow position:
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 360, 22

Conread position: 3-402
Cow position:
Alignm length: 417
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 70

Conread position: 3-413
Cow position:
Alignm length: 430
Alignm identity: 279
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 312

Conread position: 3-414
Cow position:
Alignm length: 426
Alignm identity: 287
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 204, 20

Conread position: 4-307
Cow position:
Alignm length: 304
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 4-307
Cow position:
Alignm length: 306
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 111

Conread position: 4-334
Cow position:
Alignm length: 334
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 4-349
Cow position:
Alignm length: 348
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 24

Conread position: 4-367
Cow position:
Alignm length: 366
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 0

Conread position: 4-370
Cow position:
Alignm length: 389
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 24

Conread position: 4-509
Cow position:
Alignm length: 516
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 68

Conread position: 6-265
Cow position:
Alignm length: 260
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 7-364
Cow position:
Alignm length: 359
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 37

Conread position: 8-134
Cow position:
Alignm length: 127
Alignm identity: 108
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 8-334
Cow position:
Alignm length: 328
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 20

Conread position: 8-335
Cow position:
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 41

Conread position: 8-425
Cow position:
Alignm length: 420
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 342, 39

Conread position: 10-288
Cow position:
Alignm length: 280
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 5, 46

Conread position: 13-289
Cow position:
Alignm length: 278
Alignm identity: 199
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 177, 100

Conread position: 14-333
Cow position:
Alignm length: 322
Alignm identity: 203
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 162

Conread position: 15-395
Cow position:
Alignm length: 398
Alignm identity: 263
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 66, 7

Conread position: 18-345
Cow position:
Alignm length: 343
Alignm identity: 229
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 23, 47

Conread position: 18-737
Cow position:
Alignm length: 730
Alignm identity: 444
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 319, 19

Conread position: 28-185
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 28-307
Cow position:
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 90

Conread position: 28-330
Cow position:
Alignm length: 311
Alignm identity: 205
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 88

Conread position: 28-364
Cow position:
Alignm length: 343
Alignm identity: 238
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 281, 16

Conread position: 31-413
Cow position:
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 13

Conread position: 32-401
Cow position:
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 69

Conread position: 34-410
Cow position:
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 16

Conread position: 38-326
Cow position:
Alignm length: 291
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 139

Conread position: 38-326
Cow position:
Alignm length: 290
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 193

Conread position: 38-333
Cow position:
Alignm length: 297
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 78

Conread position: 39-255
Cow position:
Alignm length: 218
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 207

Conread position: 41-326
Cow position:
Alignm length: 287
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Conread position: 41-326
Cow position:
Alignm length: 287
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Conread position: 41-427
Cow position:
Alignm length: 394
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 60

Conread position: 42-326
Cow position:
Alignm length: 289
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 130

Conread position: 47-327
Cow position:
Alignm length: 282
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 0

Conread position: 68-333
Cow position:
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 0

Conread position: 68-425
Cow position:
Alignm length: 370
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 181

Conread position: 69-364
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 71

Conread position: 70-335
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 52

Conread position: 73-376
Cow position:
Alignm length: 314
Alignm identity: 211
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 90, 35

Conread position: 88-356
Cow position:
Alignm length: 274
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 128

Conread position: 99-730
Cow position:
Alignm length: 641
Alignm identity: 405
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 209, 145

Conread position: 110-334
Cow position:
Alignm length: 228
Alignm identity: 174
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 174, 12

Conread position: 110-509
Cow position:
Alignm length: 407
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 350

Conread position: 113-314
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 159, 63

Conread position: 116-401
Cow position:
Alignm length: 291
Alignm identity: 187
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 193, 63

Conread position: 117-469
Cow position:
Alignm length: 359
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 58

Conread position: 126-326
Cow position:
Alignm length: 203
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 54

Conread position: 128-399
Cow position:
Alignm length: 280
Alignm identity: 196
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 143, 166

Conread position: 173-307
Cow position:
Alignm length: 135
Alignm identity: 111
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 173-405
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 134, 105

Conread position: 181-314
Cow position:
Alignm length: 134
Alignm identity: 111
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 194-489
Cow position:
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 126

Conread position: 201-326
Cow position:
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 110, 0

Conread position: 223-352
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 229-379
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 234-371
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 103

Conread position: 255-425
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 42

Conread position: 275-720
Cow position:
Alignm length: 456
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 288

Conread position: 580-744
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 599-722
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 599-722
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 605-731
Cow position:
Alignm length: 128
Alignm identity: 105
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 53, 71

Show alignments to all cow chromosomes.