Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8031J08.3 |
| Conread position: | 1-154 |
| Cow position: | chr11:33195063-33194910 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-156 |
| Cow position: | chr11:28050153-28050003 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-235 |
| Cow position: | chr11:32684925-32685154 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 182, 37 |
| Conread position: | 1-252 |
| Cow position: | chr11:10049756-10050006 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 0 |
| Conread position: | 1-277 |
| Cow position: | chr11:5719666-5719941 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 145 |
| Conread position: | 1-286 |
| Cow position: | chr11:30304874-30305153 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 80 |
| Conread position: | 1-291 |
| Cow position: | chr11:30125610-30125337 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 1-294 |
| Cow position: | chr11:44495961-44495666 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 1-306 |
| Cow position: | chr11:26566079-26565780 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 254, 11 |
| Conread position: | 1-307 |
| Cow position: | chr11:28230112-28229811 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 68 |
| Conread position: | 1-314 |
| Cow position: | chr11:12358785-12358476 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-314 |
| Cow position: | chr11:19102850-19102537 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-314 |
| Cow position: | chr11:26125296-26124982 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-314 |
| Cow position: | chr11:29668992-29668682 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 0 |
| Conread position: | 1-314 |
| Cow position: | chr11:37093425-37093113 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 0 |
| Conread position: | 1-314 |
| Cow position: | chr11:58134006-58134336 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 1-324 |
| Cow position: | chr11:4041435-4041116 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 163 |
| Conread position: | 1-326 |
| Cow position: | chr11:4271233-4270899 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 27 |
| Conread position: | 1-326 |
| Cow position: | chr11:5343581-5343255 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr11:9606938-9606616 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 1-326 |
| Cow position: | chr11:11987745-11988069 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 37 |
| Conread position: | 1-326 |
| Cow position: | chr11:15983260-15983586 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr11:17108049-17107724 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 75 |
| Conread position: | 1-326 |
| Cow position: | chr11:19064613-19064287 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr11:20921109-20920783 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr11:32450504-32450829 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 169 |
| Conread position: | 1-326 |
| Cow position: | chr11:36744544-36744218 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr11:37477483-37477157 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr11:41171056-41170730 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr11:44157599-44157291 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 94 |
| Conread position: | 1-326 |
| Cow position: | chr11:53287818-53287494 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 1-326 |
| Cow position: | chr11:57628410-57628084 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr11:63659945-63659626 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 0 |
| Conread position: | 1-326 |
| Cow position: | chr11:64045634-64045960 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr11:67450134-67450460 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 179 |
| Conread position: | 1-326 |
| Cow position: | chr11:67846932-67846609 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 52 |
| Conread position: | 1-326 |
| Cow position: | chr11:71329280-71329606 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 0 |
| Conread position: | 1-326 |
| Cow position: | chr11:72110324-72110003 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 23 |
| Conread position: | 1-326 |
| Cow position: | chr11:85394174-85393849 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 71 |
| Conread position: | 1-327 |
| Cow position: | chr11:8887516-8887195 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 79 |
| Conread position: | 1-333 |
| Cow position: | chr11:37065487-37065148 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 75 |
| Conread position: | 1-363 |
| Cow position: | chr11:44230764-44231117 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 310, 41 |
| Conread position: | 1-364 |
| Cow position: | chr11:23876941-23877300 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 110 |
| Conread position: | 1-364 |
| Cow position: | chr11:24392962-24393315 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 46 |
| Conread position: | 1-364 |
| Cow position: | chr11:38835780-38835434 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 147 |
| Conread position: | 1-367 |
| Cow position: | chr11:9659763-9659383 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-368 |
| Cow position: | chr11:75920051-75920402 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 41 |
| Conread position: | 1-370 |
| Cow position: | chr11:4027918-4027562 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 147 |
| Conread position: | 1-370 |
| Cow position: | chr11:12351433-12351063 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 41 |
| Conread position: | 1-370 |
| Cow position: | chr11:44895385-44894999 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 37, 145 |
| Conread position: | 1-370 |
| Cow position: | chr11:45111000-45111369 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 58 |
| Conread position: | 1-404 |
| Cow position: | chr11:39833388-39833791 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 98, 43 |
| Conread position: | 1-405 |
| Cow position: | chr11:33044484-33044081 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 75 |
| Conread position: | 1-411 |
| Cow position: | chr11:42428971-42429388 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 1-736 |
| Cow position: | chr11:8282713-8283432 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 575 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 69 |
| Conread position: | 2-169 |
| Cow position: | chr11:17924805-17924638 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 26 |
| Conread position: | 2-291 |
| Cow position: | chr11:47761293-47761017 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 185 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 48, 147 |
| Conread position: | 2-299 |
| Cow position: | chr11:9157788-9157499 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 2-301 |
| Cow position: | chr11:40776905-40776606 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-307 |
| Cow position: | chr11:14729882-14729581 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 177, 53 |
| Conread position: | 2-314 |
| Cow position: | chr11:28054958-28054651 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-322 |
| Cow position: | chr11:67867665-67867357 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 2-326 |
| Cow position: | chr11:1496435-1496112 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 2-326 |
| Cow position: | chr11:3492648-3492973 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 0 |
| Conread position: | 2-326 |
| Cow position: | chr11:43514993-43514668 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 0 |
| Conread position: | 2-333 |
| Cow position: | chr11:21466714-21467047 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 0 |
| Conread position: | 2-333 |
| Cow position: | chr11:25527210-25527528 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 42 |
| Conread position: | 2-371 |
| Cow position: | chr11:17220584-17220202 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 2-396 |
| Cow position: | chr11:36761730-36762115 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 72, 84 |
| Conread position: | 2-405 |
| Cow position: | chr11:87127481-87127888 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 3-247 |
| Cow position: | chr11:20688304-20688544 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 110 |
| Conread position: | 3-296 |
| Cow position: | chr11:43732049-43732335 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 36 |
| Conread position: | 3-314 |
| Cow position: | chr11:77728889-77728571 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 3-326 |
| Cow position: | chr11:10847083-10847404 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 207 |
| Conread position: | 3-326 |
| Cow position: | chr11:52419026-52419350 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 0 |
| Conread position: | 3-370 |
| Cow position: | chr11:8244345-8244705 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 205 |
| Conread position: | 4-280 |
| Cow position: | chr11:10210323-10210048 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 72 |
| Conread position: | 4-324 |
| Cow position: | chr11:7113235-7113554 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 96 |
| Conread position: | 4-327 |
| Cow position: | chr11:34020541-34020853 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 57 |
| Conread position: | 4-333 |
| Cow position: | chr11:37492009-37491676 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 24 |
| Conread position: | 4-333 |
| Cow position: | chr11:54209258-54209582 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 4-333 |
| Cow position: | chr11:61401400-61401081 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 40 |
| Conread position: | 4-349 |
| Cow position: | chr11:8262060-8261716 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 59 |
| Conread position: | 4-367 |
| Cow position: | chr11:45655633-45655992 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 252 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 151, 89 |
| Conread position: | 4-368 |
| Cow position: | chr11:66726105-66726480 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 64 |
| Conread position: | 4-508 |
| Cow position: | chr11:10089973-10090491 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 141 |
| Conread position: | 6-218 |
| Cow position: | chr11:15998536-15998746 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 6-241 |
| Cow position: | chr11:31877806-31878041 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 54 |
| Conread position: | 7-275 |
| Cow position: | chr11:3253656-3253390 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 42 |
| Conread position: | 10-333 |
| Cow position: | chr11:75874140-75873814 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 178, 34 |
| Conread position: | 12-366 |
| Cow position: | chr11:28063332-28063680 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 14-259 |
| Cow position: | chr11:65161913-65161664 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 165, 54 |
| Conread position: | 19-287 |
| Cow position: | chr11:44860875-44860607 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-402 |
| Cow position: | chr11:29233999-29233622 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 62, 44 |
| Conread position: | 20-268 |
| Cow position: | chr11:31414267-31414023 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 25-326 |
| Cow position: | chr11:73476968-73477270 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 0 |
| Conread position: | 28-215 |
| Cow position: | chr11:7688276-7688460 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 28-239 |
| Cow position: | chr11:32272041-32271835 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 34-195 |
| Cow position: | chr11:65836093-65836251 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 34-280 |
| Cow position: | chr11:45548143-45548388 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 156, 98 |
| Conread position: | 34-314 |
| Cow position: | chr11:52886822-52886554 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 30 |
| Conread position: | 34-317 |
| Cow position: | chr11:30186963-30187238 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 34-406 |
| Cow position: | chr11:3240317-3240683 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 40-274 |
| Cow position: | chr11:81852955-81852723 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 45-335 |
| Cow position: | chr11:48084793-48085081 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 203, 131 |
| Conread position: | 46-177 |
| Cow position: | chr11:59370669-59370538 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 113, 30 |
| Conread position: | 55-278 |
| Cow position: | chr11:43009872-43010094 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 71-215 |
| Cow position: | chr11:13067315-13067172 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 71-215 |
| Cow position: | chr11:13162689-13162832 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 74-390 |
| Cow position: | chr11:17280585-17280277 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 176 |
| Conread position: | 75-327 |
| Cow position: | chr11:8519703-8519952 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 142 |
| Conread position: | 79-332 |
| Cow position: | chr11:42361914-42362164 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 75, 47 |
| Conread position: | 86-307 |
| Cow position: | chr11:9734926-9734706 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 90-326 |
| Cow position: | chr11:38505877-38505643 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 11 |
| Conread position: | 99-310 |
| Cow position: | chr11:18073687-18073471 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 141, 127 |
| Conread position: | 114-385 |
| Cow position: | chr11:31925916-31926188 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 128-335 |
| Cow position: | chr11:4065471-4065258 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 136-363 |
| Cow position: | chr11:12093328-12093557 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 202 |
| Conread position: | 140-326 |
| Cow position: | chr11:33194778-33194591 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 143-306 |
| Cow position: | chr11:77235493-77235656 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-314 |
| Cow position: | chr11:53432286-53432117 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 149-350 |
| Cow position: | chr11:9220336-9220132 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 163 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 160-509 |
| Cow position: | chr11:7316668-7317022 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 65 |
| Conread position: | 194-334 |
| Cow position: | chr11:76374371-76374231 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 113, 91 |
| Conread position: | 217-335 |
| Cow position: | chr11:59369460-59369579 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 78 |
| Conread position: | 221-307 |
| Cow position: | chr11:15998792-15998878 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 76 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-370 |
| Cow position: | chr11:8267681-8267538 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 79, 111 |
| Conread position: | 235-370 |
| Cow position: | chr11:256317-256185 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 74, 102 |
| Conread position: | 331-508 |
| Cow position: | chr11:7113858-7114031 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 171, 44 |
| Conread position: | 528-737 |
| Cow position: | chr11:59369592-59369798 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 207, 56 |
| Conread position: | 583-722 |
| Cow position: | chr11:30124595-30124461 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.