Cow genome map

Conread name: Ss1.1-Pig4-TMW8031J08.3

Conread position: 1-235
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 49

Conread position: 1-239
Cow position:
Alignm length: 240
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 78, 37

Conread position: 1-247
Cow position:
Alignm length: 247
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-307
Cow position:
Alignm length: 307
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-314
Cow position:
Alignm length: 315
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 270

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 263

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 144

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 58

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 1-333
Cow position:
Alignm length: 335
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 76

Conread position: 1-333
Cow position:
Alignm length: 343
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 39

Conread position: 1-334
Cow position:
Alignm length: 335
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Conread position: 1-349
Cow position:
Alignm length: 351
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 240

Conread position: 1-352
Cow position:
Alignm length: 354
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 0

Conread position: 1-365
Cow position:
Alignm length: 366
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 327

Conread position: 1-370
Cow position:
Alignm length: 374
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 1-405
Cow position:
Alignm length: 411
Alignm identity: 273
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 234, 25

Conread position: 1-413
Cow position:
Alignm length: 418
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 17

Conread position: 1-506
Cow position:
Alignm length: 513
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 164

Conread position: 2-307
Cow position:
Alignm length: 306
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 0

Conread position: 2-334
Cow position:
Alignm length: 334
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 48

Conread position: 2-334
Cow position:
Alignm length: 338
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 145

Conread position: 2-364
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 42

Conread position: 3-252
Cow position:
Alignm length: 250
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 3-326
Cow position:
Alignm length: 325
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 161

Conread position: 3-336
Cow position:
Alignm length: 340
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 278

Conread position: 4-333
Cow position:
Alignm length: 338
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 103

Conread position: 4-370
Cow position:
Alignm length: 368
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 69

Conread position: 6-315
Cow position:
Alignm length: 311
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 7-278
Cow position:
Alignm length: 280
Alignm identity: 182
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 123

Conread position: 8-246
Cow position:
Alignm length: 239
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 9-283
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 169

Conread position: 13-432
Cow position:
Alignm length: 426
Alignm identity: 284
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 59, 34

Conread position: 14-317
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 158, 35

Conread position: 14-410
Cow position:
Alignm length: 412
Alignm identity: 267
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 113

Conread position: 24-334
Cow position:
Alignm length: 318
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 216

Conread position: 29-356
Cow position:
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 216

Conread position: 34-422
Cow position:
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 15

Conread position: 37-413
Cow position:
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 247

Conread position: 39-249
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 115, 0

Conread position: 44-225
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 55-370
Cow position:
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 284

Conread position: 56-364
Cow position:
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 281

Conread position: 68-291
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 17

Conread position: 73-343
Cow position:
Alignm length: 272
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 122-259
Cow position:
Alignm length: 138
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 133-354
Cow position:
Alignm length: 224
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 79

Conread position: 139-333
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 170, 98

Conread position: 205-406
Cow position:
Alignm length: 203
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 39

Conread position: 220-370
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 117

Conread position: 231-326
Cow position:
Alignm length: 97
Alignm identity: 81
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 80, 0

Show alignments to all cow chromosomes.