Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8031J08.3
        

               Conread position:
               1-113
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               1-132
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-144
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 137
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               74, 158
               

               Conread position:
               1-247
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               160, 41
               

               Conread position:
               1-247
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               187, 48
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-266
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               69, 173
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               255, 50
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 0
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 186
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 76
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 201
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 254
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 189
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 17
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 0
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               198, 100
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 48
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 11
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               310, 48
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 48
               

               Conread position:
               1-349
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 43
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 244
               

               Conread position:
               1-367
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 255
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 127
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 338
               

               Conread position:
               1-414
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               346, 26
               

               Conread position:
               1-509
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 51
               

               Conread position:
               1-509
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 41
               

               Conread position:
               2-177
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               145
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               2-318
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               189, 26
               

               Conread position:
               2-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               2-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 0
               

               Conread position:
               2-367
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 51
               

               Conread position:
               2-405
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 21
               

               Conread position:
               2-406
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               57, 41
               

               Conread position:
               3-185
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               3-245
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               3-290
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               3-365
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 25
               

               Conread position:
               3-379
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 137
               

               Conread position:
               4-255
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               64, 174
               

               Conread position:
               4-334
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 0
               

               Conread position:
               4-334
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 87
               

               Conread position:
               4-362
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 8
               

               Conread position:
               4-370
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               339, 328
               

               Conread position:
               4-370
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 40
               

               Conread position:
               4-370
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 24
               

               Conread position:
               4-371
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 76
               

               Conread position:
               4-394
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 24
               

               Conread position:
               4-406
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               186, 100
               

               Conread position:
               6-307
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               7-240
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               173, 92
               

               Conread position:
               8-326
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 0
               

               Conread position:
               8-326
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 0
               

               Conread position:
               14-401
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               258
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               144, 35
               

               Conread position:
               21-364
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               23-314
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               286, 189
               

               Conread position:
               25-314
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 0
               

               Conread position:
               29-333
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 11
               

               Conread position:
               34-289
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               145, 21
               

               Conread position:
               34-308
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 46
               

               Conread position:
               38-149
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               40-349
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               44-327
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 0
               

               Conread position:
               47-299
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 54
               

               Conread position:
               69-358
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               30, 69
               

               Conread position:
               77-230
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               128, 7
               

               Conread position:
               77-314
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               143, 171
               

               Conread position:
               105-242
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               106-333
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               109, 70
               

               Conread position:
               122-259
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-326
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 0
               

               Conread position:
               129-326
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               157-326
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               165-352
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               21, 92
               

               Conread position:
               167-413
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               151, 68
               

               Conread position:
               176-326
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               208-497
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 111
               

               Conread position:
               209-543
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               54, 129
               

               Conread position:
               219-370
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               92, 118
               

               Conread position:
               560-732
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               155, 103
               

               Conread position:
               595-744
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               138, 69
               

               Conread position:
               599-721
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 0
               
Show alignments to all cow chromosomes.