Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8031J08.3 |
| Conread position: | 1-121 |
| Cow position: | chr15:11598534-11598414 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-154 |
| Cow position: | chr15:55781-55934 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 89, 100 |
| Conread position: | 1-161 |
| Cow position: | chr15:316772-316613 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-170 |
| Cow position: | chr15:49676601-49676762 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-184 |
| Cow position: | chr15:3843244-3843064 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-194 |
| Cow position: | chr15:22204533-22204340 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-204 |
| Cow position: | chr15:21816166-21815962 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 1-223 |
| Cow position: | chr15:21877777-21877555 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-275 |
| Cow position: | chr15:22920705-22920979 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-290 |
| Cow position: | chr15:3261827-3261547 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 1-291 |
| Cow position: | chr15:525270-524980 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 17 |
| Conread position: | 1-291 |
| Cow position: | chr15:7928203-7928484 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 181, 22 |
| Conread position: | 1-305 |
| Cow position: | chr15:2648076-2647772 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-307 |
| Cow position: | chr15:4630332-4630034 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 46 |
| Conread position: | 1-307 |
| Cow position: | chr15:6156374-6156068 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-314 |
| Cow position: | chr15:2076227-2076540 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-314 |
| Cow position: | chr15:12421586-12421273 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-314 |
| Cow position: | chr15:17039672-17039365 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 1-314 |
| Cow position: | chr15:18576300-18576606 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 1-314 |
| Cow position: | chr15:21666166-21665854 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 1-314 |
| Cow position: | chr15:42490785-42491096 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-315 |
| Cow position: | chr15:42936294-42936607 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-323 |
| Cow position: | chr15:41365760-41366077 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 197 |
| Conread position: | 1-325 |
| Cow position: | chr15:29009423-29009744 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 163 |
| Conread position: | 1-326 |
| Cow position: | chr15:444189-444514 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 187 |
| Conread position: | 1-326 |
| Cow position: | chr15:1519569-1519244 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 135 |
| Conread position: | 1-326 |
| Cow position: | chr15:1772079-1772404 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 135 |
| Conread position: | 1-326 |
| Cow position: | chr15:1781834-1782160 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr15:1834880-1834555 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 81 |
| Conread position: | 1-326 |
| Cow position: | chr15:2011663-2011987 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 154 |
| Conread position: | 1-326 |
| Cow position: | chr15:3010271-3009945 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr15:3888460-3888785 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 175 |
| Conread position: | 1-326 |
| Cow position: | chr15:4678073-4678382 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 43 |
| Conread position: | 1-326 |
| Cow position: | chr15:4811903-4812224 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 118 |
| Conread position: | 1-326 |
| Cow position: | chr15:7836824-7837149 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 59 |
| Conread position: | 1-326 |
| Cow position: | chr15:15347540-15347214 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr15:18268407-18268081 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr15:20748996-20749321 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 49 |
| Conread position: | 1-326 |
| Cow position: | chr15:28490561-28490235 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr15:31358483-31358791 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 88 |
| Conread position: | 1-326 |
| Cow position: | chr15:32494806-32494481 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 243 |
| Conread position: | 1-326 |
| Cow position: | chr15:36970504-36970830 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-326 |
| Cow position: | chr15:42320837-42320515 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 48 |
| Conread position: | 1-326 |
| Cow position: | chr15:50124359-50124036 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 230 |
| Conread position: | 1-333 |
| Cow position: | chr15:4196043-4196377 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-333 |
| Cow position: | chr15:21961087-21961421 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 0 |
| Conread position: | 1-333 |
| Cow position: | chr15:37392081-37392405 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 135 |
| Conread position: | 1-334 |
| Cow position: | chr15:4143243-4142904 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 233 |
| Conread position: | 1-334 |
| Cow position: | chr15:6472330-6472003 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 150 |
| Conread position: | 1-334 |
| Cow position: | chr15:7922061-7921729 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 175 |
| Conread position: | 1-341 |
| Cow position: | chr15:1763672-1764010 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 166 |
| Conread position: | 1-343 |
| Cow position: | chr15:7233892-7234225 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 49 |
| Conread position: | 1-349 |
| Cow position: | chr15:7544460-7544810 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 1-349 |
| Cow position: | chr15:17292019-17292365 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 100 |
| Conread position: | 1-352 |
| Cow position: | chr15:690372-690721 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 39 |
| Conread position: | 1-352 |
| Cow position: | chr15:6554274-6553925 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 80 |
| Conread position: | 1-360 |
| Cow position: | chr15:3037930-3037577 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 80 |
| Conread position: | 1-364 |
| Cow position: | chr15:4384855-4385207 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 27 |
| Conread position: | 1-364 |
| Cow position: | chr15:4649417-4649766 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 24 |
| Conread position: | 1-364 |
| Cow position: | chr15:19738473-19738113 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 126 |
| Conread position: | 1-364 |
| Cow position: | chr15:24294671-24295036 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 0 |
| Conread position: | 1-370 |
| Cow position: | chr15:1662959-1663319 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 190, 22 |
| Conread position: | 1-370 |
| Cow position: | chr15:7260207-7260572 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 177 |
| Conread position: | 1-402 |
| Cow position: | chr15:17219290-17218888 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 98, 46 |
| Conread position: | 1-413 |
| Cow position: | chr15:2007121-2007533 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 1-413 |
| Cow position: | chr15:15266066-15265662 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 53 |
| Conread position: | 1-413 |
| Cow position: | chr15:24715810-24716216 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 42 |
| Conread position: | 1-432 |
| Cow position: | chr15:17787578-17787152 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 41 |
| Conread position: | 1-445 |
| Cow position: | chr15:8408138-8408584 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 41 |
| Conread position: | 1-507 |
| Cow position: | chr15:36642205-36642702 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 73 |
| Conread position: | 1-509 |
| Cow position: | chr15:24793630-24794129 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 23 |
| Conread position: | 1-740 |
| Cow position: | chr15:13428619-13429355 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 2-167 |
| Cow position: | chr15:45886373-45886535 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 2-327 |
| Cow position: | chr15:4961223-4961534 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 49 |
| Conread position: | 2-333 |
| Cow position: | chr15:4681811-4682146 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 82 |
| Conread position: | 2-333 |
| Cow position: | chr15:4733442-4733772 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 26 |
| Conread position: | 2-333 |
| Cow position: | chr15:23157247-23156929 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 106 |
| Conread position: | 2-334 |
| Cow position: | chr15:53338620-53338937 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 22 |
| Conread position: | 2-352 |
| Cow position: | chr15:35747883-35748225 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 18 |
| Conread position: | 2-353 |
| Cow position: | chr15:35735036-35735389 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 339 |
| Conread position: | 2-364 |
| Cow position: | chr15:10888191-10888544 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 62 |
| Conread position: | 2-367 |
| Cow position: | chr15:7522907-7522548 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 79 |
| Conread position: | 2-370 |
| Cow position: | chr15:4671003-4671374 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 75 |
| Conread position: | 2-370 |
| Cow position: | chr15:4764786-4765149 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 170 |
| Conread position: | 2-373 |
| Cow position: | chr15:16542249-16542626 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 275 |
| Conread position: | 2-375 |
| Cow position: | chr15:32693130-32693495 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 36 |
| Conread position: | 2-411 |
| Cow position: | chr15:12614648-12615058 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 175 |
| Conread position: | 2-504 |
| Cow position: | chr15:32679968-32679490 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 82 |
| Conread position: | 3-232 |
| Cow position: | chr15:21950948-21950729 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 24 |
| Conread position: | 3-257 |
| Cow position: | chr15:3564909-3564654 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 138, 60 |
| Conread position: | 3-314 |
| Cow position: | chr15:18333245-18332936 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 3-326 |
| Cow position: | chr15:51216171-51216494 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 133 |
| Conread position: | 3-333 |
| Cow position: | chr15:36648494-36648821 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 77 |
| Conread position: | 3-364 |
| Cow position: | chr15:4921726-4922090 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 25 |
| Conread position: | 3-401 |
| Cow position: | chr15:2803007-2802603 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 3-422 |
| Cow position: | chr15:324528-324943 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 65 |
| Conread position: | 4-148 |
| Cow position: | chr15:6650394-6650536 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 4-267 |
| Cow position: | chr15:25186360-25186103 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 4-291 |
| Cow position: | chr15:44828398-44828687 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 42 |
| Conread position: | 4-292 |
| Cow position: | chr15:29021324-29021606 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 4-295 |
| Cow position: | chr15:38979502-38979792 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 0 |
| Conread position: | 4-307 |
| Cow position: | chr15:22151793-22152091 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 173, 31 |
| Conread position: | 4-333 |
| Cow position: | chr15:4170112-4169786 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 4-333 |
| Cow position: | chr15:8000661-8000320 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 82 |
| Conread position: | 4-333 |
| Cow position: | chr15:25789385-25789056 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 127 |
| Conread position: | 4-352 |
| Cow position: | chr15:4795266-4795607 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 59 |
| Conread position: | 4-371 |
| Cow position: | chr15:6078315-6078686 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 341 |
| Conread position: | 4-371 |
| Cow position: | chr15:8750010-8750371 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 110 |
| Conread position: | 4-388 |
| Cow position: | chr15:51671937-51672324 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 36 |
| Conread position: | 5-302 |
| Cow position: | chr15:51800318-51800605 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 42 |
| Conread position: | 5-370 |
| Cow position: | chr15:14583034-14582675 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 0 |
| Conread position: | 5-509 |
| Cow position: | chr15:35648635-35648146 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 14 |
| Conread position: | 7-352 |
| Cow position: | chr15:8099074-8099419 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 43 |
| Conread position: | 12-149 |
| Cow position: | chr15:32710313-32710450 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-122 |
| Cow position: | chr15:2593222-2593114 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-176 |
| Cow position: | chr15:9428568-9428729 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 14-334 |
| Cow position: | chr15:18023191-18022863 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 166, 53 |
| Conread position: | 14-364 |
| Cow position: | chr15:32733192-32732846 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 12, 80 |
| Conread position: | 14-370 |
| Cow position: | chr15:6277664-6277314 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 62 |
| Conread position: | 15-413 |
| Cow position: | chr15:21448895-21449307 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 117 |
| Conread position: | 19-364 |
| Cow position: | chr15:35754000-35753658 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 225 |
| Conread position: | 28-191 |
| Cow position: | chr15:10479090-10478927 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 53 |
| Conread position: | 28-405 |
| Cow position: | chr15:35680689-35680316 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 261 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 91, 22 |
| Conread position: | 28-410 |
| Cow position: | chr15:6621950-6622330 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 45 |
| Conread position: | 30-363 |
| Cow position: | chr15:20357677-20357340 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 32-411 |
| Cow position: | chr15:40105075-40105458 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 212 |
| Conread position: | 34-265 |
| Cow position: | chr15:7788758-7788527 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 34-291 |
| Cow position: | chr15:2676689-2676442 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 38-326 |
| Cow position: | chr15:17080584-17080296 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 158 |
| Conread position: | 38-326 |
| Cow position: | chr15:50146695-50146984 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 40-349 |
| Cow position: | chr15:17271778-17271469 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 297 |
| Conread position: | 40-413 |
| Cow position: | chr15:1236939-1237316 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 97 |
| Conread position: | 44-403 |
| Cow position: | chr15:11299187-11298828 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 178, 29 |
| Conread position: | 45-364 |
| Cow position: | chr15:44069546-44069864 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 283 |
| Conread position: | 47-415 |
| Cow position: | chr15:36627046-36626670 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 55-326 |
| Cow position: | chr15:6593309-6593039 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 254, 91 |
| Conread position: | 65-307 |
| Cow position: | chr15:2924534-2924771 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 65-326 |
| Cow position: | chr15:6370134-6369874 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 51 |
| Conread position: | 68-335 |
| Cow position: | chr15:32672534-32672797 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 68-509 |
| Cow position: | chr15:370035-369592 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 186 |
| Conread position: | 69-370 |
| Cow position: | chr15:10787482-10787183 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 269 |
| Conread position: | 69-425 |
| Cow position: | chr15:686175-686530 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 131 |
| Conread position: | 72-252 |
| Cow position: | chr15:32722535-32722356 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 73-401 |
| Cow position: | chr15:6458624-6458965 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 77-370 |
| Cow position: | chr15:328093-328371 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 232, 110 |
| Conread position: | 77-370 |
| Cow position: | chr15:7934006-7934274 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 232, 70 |
| Conread position: | 89-333 |
| Cow position: | chr15:7894562-7894318 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 159 |
| Conread position: | 113-326 |
| Cow position: | chr15:2589774-2589565 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 196, 90 |
| Conread position: | 113-326 |
| Cow position: | chr15:2592135-2591926 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 196, 90 |
| Conread position: | 140-326 |
| Cow position: | chr15:56206-56393 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 152-370 |
| Cow position: | chr15:6650259-6650054 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 157, 64 |
| Conread position: | 166-406 |
| Cow position: | chr15:9429273-9429531 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 114, 225 |
| Conread position: | 174-326 |
| Cow position: | chr15:316113-315954 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 181-367 |
| Cow position: | chr15:21623458-21623641 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 130, 31 |
| Conread position: | 181-370 |
| Cow position: | chr15:32710453-32710642 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 135, 156 |
| Conread position: | 190-326 |
| Cow position: | chr15:1882736-1882600 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 121, 64 |
| Conread position: | 194-401 |
| Cow position: | chr15:5068623-5068831 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 115, 143 |
| Conread position: | 214-333 |
| Cow position: | chr15:5544585-5544706 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 528-716 |
| Cow position: | chr15:32676018-32675830 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 124, 32 |
| Conread position: | 544-737 |
| Cow position: | chr15:1664223-1664417 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 123 |
| Conread position: | 599-722 |
| Cow position: | chr15:35648124-35648003 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.