Cow genome map

Conread name: Ss1.1-Pig4-TMW8031J08.3

Conread position: 1-141
Cow position:
Alignm length: 141
Alignm identity: 115
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 1-159
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 1-177
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 26

Conread position: 1-198
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 1-234
Cow position:
Alignm length: 235
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 49

Conread position: 1-252
Cow position:
Alignm length: 253
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 1-265
Cow position:
Alignm length: 266
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 100

Conread position: 1-278
Cow position:
Alignm length: 285
Alignm identity: 188
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 62, 25

Conread position: 1-305
Cow position:
Alignm length: 305
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 1-307
Cow position:
Alignm length: 307
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-307
Cow position:
Alignm length: 307
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 0

Conread position: 1-314
Cow position:
Alignm length: 315
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 261

Conread position: 1-315
Cow position:
Alignm length: 315
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 1-326
Cow position:
Alignm length: 331
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 16

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 0

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 109

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 49

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 100

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 109

Conread position: 1-332
Cow position:
Alignm length: 337
Alignm identity: 215
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 79

Conread position: 1-333
Cow position:
Alignm length: 334
Alignm identity: 225
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 131, 37

Conread position: 1-333
Cow position:
Alignm length: 337
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 246

Conread position: 1-333
Cow position:
Alignm length: 335
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-333
Cow position:
Alignm length: 338
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 27

Conread position: 1-334
Cow position:
Alignm length: 335
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 306

Conread position: 1-335
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 73, 85

Conread position: 1-343
Cow position:
Alignm length: 344
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 51

Conread position: 1-349
Cow position:
Alignm length: 350
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 141

Conread position: 1-364
Cow position:
Alignm length: 365
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 37

Conread position: 1-370
Cow position:
Alignm length: 374
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 125

Conread position: 1-392
Cow position:
Alignm length: 396
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 336

Conread position: 1-413
Cow position:
Alignm length: 416
Alignm identity: 274
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 11, 6

Conread position: 1-413
Cow position:
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 46

Conread position: 1-516
Cow position:
Alignm length: 526
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 49

Conread position: 2-257
Cow position:
Alignm length: 256
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 2-326
Cow position:
Alignm length: 326
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 0

Conread position: 2-335
Cow position:
Alignm length: 340
Alignm identity: 215
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 18

Conread position: 2-349
Cow position:
Alignm length: 349
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 11

Conread position: 2-365
Cow position:
Alignm length: 365
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 326

Conread position: 2-433
Cow position:
Alignm length: 440
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 201

Conread position: 3-314
Cow position:
Alignm length: 313
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 3-314
Cow position:
Alignm length: 312
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 3-326
Cow position:
Alignm length: 325
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 0

Conread position: 4-147
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 4-208
Cow position:
Alignm length: 205
Alignm identity: 158
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 138, 0

Conread position: 4-326
Cow position:
Alignm length: 324
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 24

Conread position: 4-327
Cow position:
Alignm length: 331
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 4-327
Cow position:
Alignm length: 331
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 46

Conread position: 4-333
Cow position:
Alignm length: 338
Alignm identity: 219
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 13, 26

Conread position: 4-333
Cow position:
Alignm length: 333
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 72

Conread position: 4-333
Cow position:
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 74

Conread position: 4-334
Cow position:
Alignm length: 334
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 291

Conread position: 4-370
Cow position:
Alignm length: 368
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 38

Conread position: 4-509
Cow position:
Alignm length: 518
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 46

Conread position: 5-327
Cow position:
Alignm length: 324
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 0

Conread position: 5-333
Cow position:
Alignm length: 348
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 23

Conread position: 6-334
Cow position:
Alignm length: 330
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 0

Conread position: 6-370
Cow position:
Alignm length: 367
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 268

Conread position: 8-293
Cow position:
Alignm length: 288
Alignm identity: 198
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 242, 15

Conread position: 14-259
Cow position:
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 14-334
Cow position:
Alignm length: 323
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 66

Conread position: 20-413
Cow position:
Alignm length: 414
Alignm identity: 286
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 55, 29

Conread position: 24-413
Cow position:
Alignm length: 397
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 98

Conread position: 26-350
Cow position:
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 22

Conread position: 28-401
Cow position:
Alignm length: 394
Alignm identity: 262
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 81

Conread position: 28-405
Cow position:
Alignm length: 382
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 9

Conread position: 34-363
Cow position:
Alignm length: 336
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 39

Conread position: 35-401
Cow position:
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 266

Conread position: 40-186
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 122, 104

Conread position: 44-306
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 176, 27

Conread position: 44-307
Cow position:
Alignm length: 264
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 60-288
Cow position:
Alignm length: 229
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 72-333
Cow position:
Alignm length: 269
Alignm identity: 179
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 66

Conread position: 82-307
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 92

Conread position: 84-385
Cow position:
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 26

Conread position: 108-364
Cow position:
Alignm length: 261
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 237

Conread position: 131-333
Cow position:
Alignm length: 205
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 135-306
Cow position:
Alignm length: 172
Alignm identity: 139
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 53, 0

Conread position: 152-413
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 157, 92

Conread position: 174-509
Cow position:
Alignm length: 342
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 193-370
Cow position:
Alignm length: 182
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 146

Conread position: 205-364
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 67

Conread position: 605-735
Cow position:
Alignm length: 131
Alignm identity: 107
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.