Cow genome map

Conread name: Ss1.1-Pig4-TMW8031J08.3

Conread position: 1-108
Cow position:
Alignm length: 108
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 1-216
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 83, 0

Conread position: 1-271
Cow position:
Alignm length: 273
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 134

Conread position: 1-277
Cow position:
Alignm length: 284
Alignm identity: 182
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 250

Conread position: 1-291
Cow position:
Alignm length: 292
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 203

Conread position: 1-297
Cow position:
Alignm length: 297
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 145

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 222

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 85

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 49

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 133

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 27

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 1-327
Cow position:
Alignm length: 328
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-333
Cow position:
Alignm length: 342
Alignm identity: 227
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 44

Conread position: 1-333
Cow position:
Alignm length: 334
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-333
Cow position:
Alignm length: 339
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 168

Conread position: 1-355
Cow position:
Alignm length: 359
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 24

Conread position: 1-413
Cow position:
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 48

Conread position: 1-599
Cow position:
Alignm length: 609
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 49

Conread position: 2-111
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 2-141
Cow position:
Alignm length: 140
Alignm identity: 115
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 2-200
Cow position:
Alignm length: 199
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-201
Cow position:
Alignm length: 200
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 2-255
Cow position:
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 144

Conread position: 2-266
Cow position:
Alignm length: 268
Alignm identity: 194
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 85, 0

Conread position: 2-306
Cow position:
Alignm length: 306
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 21

Conread position: 2-326
Cow position:
Alignm length: 329
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 53

Conread position: 3-507
Cow position:
Alignm length: 512
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 33

Conread position: 4-125
Cow position:
Alignm length: 122
Alignm identity: 102
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 4-207
Cow position:
Alignm length: 204
Alignm identity: 158
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 4-208
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 175, 38

Conread position: 4-226
Cow position:
Alignm length: 223
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 0

Conread position: 4-233
Cow position:
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 4-239
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 4-299
Cow position:
Alignm length: 297
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 88

Conread position: 4-320
Cow position:
Alignm length: 318
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 196

Conread position: 6-370
Cow position:
Alignm length: 368
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 71

Conread position: 6-384
Cow position:
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 34

Conread position: 7-224
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 8-413
Cow position:
Alignm length: 419
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 143

Conread position: 9-352
Cow position:
Alignm length: 345
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 46

Conread position: 10-294
Cow position:
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 14-335
Cow position:
Alignm length: 325
Alignm identity: 226
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 76, 12

Conread position: 15-199
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 140, 32

Conread position: 15-314
Cow position:
Alignm length: 300
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 17-385
Cow position:
Alignm length: 370
Alignm identity: 228
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 189, 80

Conread position: 18-257
Cow position:
Alignm length: 240
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 0

Conread position: 18-314
Cow position:
Alignm length: 298
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 20-364
Cow position:
Alignm length: 349
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 56

Conread position: 28-271
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 66, 24

Conread position: 34-307
Cow position:
Alignm length: 276
Alignm identity: 183
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 65, 18

Conread position: 38-335
Cow position:
Alignm length: 300
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 29

Conread position: 39-435
Cow position:
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 133

Conread position: 39-696
Cow position:
Alignm length: 685
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 330

Conread position: 42-415
Cow position:
Alignm length: 376
Alignm identity: 253
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 25, 39

Conread position: 42-449
Cow position:
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 184

Conread position: 58-333
Cow position:
Alignm length: 281
Alignm identity: 191
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 162, 43

Conread position: 68-335
Cow position:
Alignm length: 270
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 34

Conread position: 81-425
Cow position:
Alignm length: 349
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 195

Conread position: 136-334
Cow position:
Alignm length: 202
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 137-370
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 42, 52

Conread position: 139-378
Cow position:
Alignm length: 241
Alignm identity: 142
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 149, 143

Conread position: 142-333
Cow position:
Alignm length: 194
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 47

Conread position: 151-314
Cow position:
Alignm length: 165
Alignm identity: 134
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 154-303
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 172-507
Cow position:
Alignm length: 348
Alignm identity: 243
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 13, 231

Conread position: 176-364
Cow position:
Alignm length: 190
Alignm identity: 152
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 133, 161

Conread position: 194-509
Cow position:
Alignm length: 331
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 115, 168

Conread position: 204-543
Cow position:
Alignm length: 348
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 94

Conread position: 218-343
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 93, 0

Conread position: 277-509
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 330-509
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 570-732
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 583-736
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 128, 104

Conread position: 599-731
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 120, 80

Conread position: 605-720
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.