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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8031J08.3
        

               
Conread position:
               
1-105
               

               
Cow position:
               
chr2:5519523-5519419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-105
               

               
Cow position:
               
chr2:67421381-67421276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr2:3837756-3837897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr2:41149508-41149650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr2:975813-975631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr2:72682669-72682484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:3730194-3730396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
117, 162
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:6877955-6878152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
115, 60
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:29029572-29029780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr2:52173853-52173624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr2:10730094-10729849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 199
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr2:73191401-73191636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
176, 130
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr2:24145740-24145985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr2:67430505-67430779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr2:11399290-11399018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 62
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr2:202188-201908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 72
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr2:81256282-81256575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr2:283228-282915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 0
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr2:28650762-28650454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr2:50077065-50077373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 46
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr2:80586568-80586883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 296
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr2:36979840-36980159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
317, 152
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr2:51991066-51990741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:176064-175738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:212754-212431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 80
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:290366-290042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 100
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:2184792-2184466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:2413332-2413006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 174
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:5870869-5870564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 43
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:9907377-9907703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:13046227-13045916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:16899711-16900039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:19009698-19010022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 100
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:25031011-25030686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 199
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:41656547-41656872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 272
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:41685978-41686306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:44090764-44091091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:47038948-47038624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 255
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:47810475-47810803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:49471711-49472037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:50983764-50983439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 227
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:52615936-52616262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 255
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:57142222-57141896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:57334665-57334986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr2:4404883-4404557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 248
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr2:5813937-5813587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr2:10711965-10711638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 39
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr2:44346180-44346513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 0
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr2:78761940-78762268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 43
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr2:80956172-80955838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 0
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr2:422536-422866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 123
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr2:59414215-59413882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 54
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr2:82167073-82167407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 0
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr2:2380590-2380906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 91
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr2:45921782-45921463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr2:768929-768577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 79
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr2:15580521-15580156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr2:11159662-11159302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 166
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr2:28792711-28793077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 175
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr2:52062131-52062492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 327
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr2:53329213-53329578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 72
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr2:26921161-26921526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 83
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr2:10269196-10268830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 327
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr2:44935620-44935258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 48
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr2:53473693-53473330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 220
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr2:28746931-28747327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr2:63293109-63292694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 115
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr2:50321745-50322149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 48
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr2:7211169-7211577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 46
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr2:35352837-35353238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 16
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr2:74391652-74391224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr2:3749371-3749800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
80, 61
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr2:43959075-43959468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr2:6755856-6755420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr2:14821974-14822470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr2:32458542-32458332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr2:46402796-46402578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr2:56438255-56438027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 16
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr2:24921864-24922190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 0
               

               
Conread position:
               
2-327
               

               
Cow position:
               
chr2:52152387-52152073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 37
               

               
Conread position:
               
2-334
               

               
Cow position:
               
chr2:6772706-6772374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 261
               

               
Conread position:
               
2-334
               

               
Cow position:
               
chr2:36991356-36991684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
280, 74
               

               
Conread position:
               
2-504
               

               
Cow position:
               
chr2:39621759-39622274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 26
               

               
Conread position:
               
2-509
               

               
Cow position:
               
chr2:15578106-15577589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
2-509
               

               
Cow position:
               
chr2:28621356-28620866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 37
               

               
Conread position:
               
2-509
               

               
Cow position:
               
chr2:34565461-34564959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
2-538
               

               
Cow position:
               
chr2:28643653-28643132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 42
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr2:10294596-10294908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
187, 74
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr2:65938981-65938680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr2:10186767-10186456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr2:42671921-42671611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
3-327
               

               
Cow position:
               
chr2:44106641-44106318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr2:13488164-13488484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
73, 32
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr2:2102001-2101672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 65
               

               
Conread position:
               
3-335
               

               
Cow position:
               
chr2:50402740-50403060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
308, 77
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr2:49604189-49604549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
4-130
               

               
Cow position:
               
chr2:40245526-40245649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
4-160
               

               
Cow position:
               
chr2:324354-324198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 142
               

               
Conread position:
               
4-182
               

               
Cow position:
               
chr2:10733372-10733196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr2:52680889-52681096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
150, 172
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr2:53552639-53552873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 58
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr2:20028254-20028520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 132
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr2:52655937-52656210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 70
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr2:85356302-85356019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr2:14560667-14560969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 51
               

               
Conread position:
               
4-326
               

               
Cow position:
               
chr2:3325097-3324774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 0
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr2:10843871-10843553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 38
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr2:46946135-46946465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 264
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr2:2363665-2364000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 51
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr2:78741598-78741953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 47
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr2:6960213-6960571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 192
               

               
Conread position:
               
4-367
               

               
Cow position:
               
chr2:16076831-16076466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 253
               

               
Conread position:
               
4-370
               

               
Cow position:
               
chr2:41172155-41172517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 41
               

               
Conread position:
               
4-370
               

               
Cow position:
               
chr2:72922364-72922001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 333
               

               
Conread position:
               
4-427
               

               
Cow position:
               
chr2:7901753-7902174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 68
               

               
Conread position:
               
5-333
               

               
Cow position:
               
chr2:1647632-1647961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
250, 171
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr2:3837515-3837211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 67
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr2:44991810-44991452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 38
               

               
Conread position:
               
8-313
               

               
Cow position:
               
chr2:22077263-22077566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 94
               

               
Conread position:
               
10-370
               

               
Cow position:
               
chr2:26868745-26869097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 66
               

               
Conread position:
               
10-496
               

               
Cow position:
               
chr2:2356997-2356504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 33
               

               
Conread position:
               
14-403
               

               
Cow position:
               
chr2:72109049-72108671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
125, 11
               

               
Conread position:
               
15-509
               

               
Cow position:
               
chr2:16288718-16289205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
20-321
               

               
Cow position:
               
chr2:14518968-14518671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 213
               

               
Conread position:
               
27-333
               

               
Cow position:
               
chr2:32654831-32655134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 23
               

               
Conread position:
               
27-370
               

               
Cow position:
               
chr2:11969280-11968939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 311
               

               
Conread position:
               
28-307
               

               
Cow position:
               
chr2:66309601-66309322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr2:8118055-8118252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-326
               

               
Cow position:
               
chr2:42333803-42333500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
29-336
               

               
Cow position:
               
chr2:64894185-64893888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
231, 44
               

               
Conread position:
               
30-326
               

               
Cow position:
               
chr2:39421071-39421369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
31-744
               

               
Cow position:
               
chr2:36031241-36030515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 127
               

               
Conread position:
               
34-288
               

               
Cow position:
               
chr2:4235668-4235908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
148, 39
               

               
Conread position:
               
34-307
               

               
Cow position:
               
chr2:51365111-51364846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
245, 100
               

               
Conread position:
               
34-334
               

               
Cow position:
               
chr2:10612130-10611828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
34-402
               

               
Cow position:
               
chr2:77208147-77208499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
160, 44
               

               
Conread position:
               
34-536
               

               
Cow position:
               
chr2:1673169-1672669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 145
               

               
Conread position:
               
38-232
               

               
Cow position:
               
chr2:26865054-26864860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
38-333
               

               
Cow position:
               
chr2:5905359-5905065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 17
               

               
Conread position:
               
39-335
               

               
Cow position:
               
chr2:5485738-5485453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 20
               

               
Conread position:
               
39-410
               

               
Cow position:
               
chr2:51305232-51304862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
42-210
               

               
Cow position:
               
chr2:29147904-29147736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 13
               

               
Conread position:
               
42-225
               

               
Cow position:
               
chr2:15062815-15062634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
48-177
               

               
Cow position:
               
chr2:38589668-38589796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
48-228
               

               
Cow position:
               
chr2:20876124-20875948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
48-403
               

               
Cow position:
               
chr2:20874662-20874307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
265, 29
               

               
Conread position:
               
53-398
               

               
Cow position:
               
chr2:20903631-20903302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
5, 111
               

               
Conread position:
               
58-392
               

               
Cow position:
               
chr2:59963708-59963369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 88
               

               
Conread position:
               
59-307
               

               
Cow position:
               
chr2:52350326-52350572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
131, 117
               

               
Conread position:
               
65-334
               

               
Cow position:
               
chr2:5481137-5480871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 21
               

               
Conread position:
               
68-297
               

               
Cow position:
               
chr2:61130784-61130573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
76, 90
               

               
Conread position:
               
68-334
               

               
Cow position:
               
chr2:45213757-45213487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 17
               

               
Conread position:
               
68-352
               

               
Cow position:
               
chr2:80516602-80516875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
68-363
               

               
Cow position:
               
chr2:11691714-11692007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
68-413
               

               
Cow position:
               
chr2:45968820-45968471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
205, 17
               

               
Conread position:
               
68-575
               

               
Cow position:
               
chr2:36054122-36053604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 393
               

               
Conread position:
               
87-255
               

               
Cow position:
               
chr2:6638687-6638855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
89-413
               

               
Cow position:
               
chr2:75676353-75676033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
171, 15
               

               
Conread position:
               
92-326
               

               
Cow position:
               
chr2:54737065-54737298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
219, 77
               

               
Conread position:
               
97-259
               

               
Cow position:
               
chr2:54649262-54649100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
97-425
               

               
Cow position:
               
chr2:32389345-32389680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 179
               

               
Conread position:
               
100-366
               

               
Cow position:
               
chr2:46465567-46465301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 46
               

               
Conread position:
               
102-355
               

               
Cow position:
               
chr2:47603889-47603648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 102
               

               
Conread position:
               
106-314
               

               
Cow position:
               
chr2:4926607-4926399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
107-326
               

               
Cow position:
               
chr2:67419729-67419509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 0
               

               
Conread position:
               
112-481
               

               
Cow position:
               
chr2:1490668-1490299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
115-326
               

               
Cow position:
               
chr2:5474094-5474306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
115-381
               

               
Cow position:
               
chr2:28616627-28616358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 64
               

               
Conread position:
               
119-326
               

               
Cow position:
               
chr2:2088591-2088383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
166-401
               

               
Cow position:
               
chr2:41146874-41147116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
24, 205
               

               
Conread position:
               
183-334
               

               
Cow position:
               
chr2:49590047-49590199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
197-472
               

               
Cow position:
               
chr2:41149652-41149935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
198-298
               

               
Cow position:
               
chr2:49712811-49712910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
203-388
               

               
Cow position:
               
chr2:85068893-85068714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
111, 125
               

               
Conread position:
               
214-325
               

               
Cow position:
               
chr2:1490299-1490187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
221-326
               

               
Cow position:
               
chr2:57588381-57588486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 29
               

               
Conread position:
               
253-509
               

               
Cow position:
               
chr2:15062344-15062084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
264-458
               

               
Cow position:
               
chr2:24393442-24393246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
45, 133
               

               
Conread position:
               
574-744
               

               
Cow position:
               
chr2:73192632-73192803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
135, 104
               

               
Conread position:
               
577-743
               

               
Cow position:
               
chr2:42333205-42333042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
147, 89
               

               
Conread position:
               
595-722
               

               
Cow position:
               
chr2:7902691-7902813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
599-722
               

               
Cow position:
               
chr2:34564936-34564817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
599-728
               

               
Cow position:
               
chr2:782061-781934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
599-744
               

               
Cow position:
               
chr2:39622298-39622443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
102, 79
               

               
Conread position:
               
603-736
               

               
Cow position:
               
chr2:5963413-5963283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
628-723
               

               
Cow position:
               
chr2:16289249-16289342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               
Show alignments to all cow chromosomes.