Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8031J08.3
        

               Conread position:
               1-89
               

               Cow position:
               
               

               Alignm length:
               89
               

               Alignm identity:
               76
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-95
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-149
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-281
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-281
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 141
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 68
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 46
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 76
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 63
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 189
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 150
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 219
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 139
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 97
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 0
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 274
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 241
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 0
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 46
               

               Conread position:
               1-410
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 36
               

               Conread position:
               1-411
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 39
               

               Conread position:
               1-415
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 177
               

               Conread position:
               2-160
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               2-314
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               189, 103
               

               Conread position:
               2-322
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               2-325
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 78
               

               Conread position:
               2-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 0
               

               Conread position:
               2-350
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 0
               

               Conread position:
               2-370
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 335
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               166, 24
               

               Conread position:
               3-302
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 36
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 70
               

               Conread position:
               3-404
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 47
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               155, 100
               

               Conread position:
               4-367
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 60
               

               Conread position:
               4-509
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 40
               

               Conread position:
               5-508
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 58
               

               Conread position:
               6-413
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               73, 36
               

               Conread position:
               7-307
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 94
               

               Conread position:
               7-366
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 66
               

               Conread position:
               8-334
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 187
               

               Conread position:
               10-364
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 283
               

               Conread position:
               10-413
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               285
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               11-333
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 63
               

               Conread position:
               14-411
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 174
               

               Conread position:
               21-413
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 79
               

               Conread position:
               34-208
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               34-283
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               100, 15
               

               Conread position:
               34-325
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               35-397
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               30, 239
               

               Conread position:
               38-326
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 0
               

               Conread position:
               40-291
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               55-314
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               68-307
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               68-494
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 289
               

               Conread position:
               71-388
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 152
               

               Conread position:
               90-388
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               91, 59
               

               Conread position:
               115-307
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               127-406
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               52, 119
               

               Conread position:
               140-334
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               148-326
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               173-401
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               184-421
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               195-413
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               123, 176
               

               Conread position:
               209-326
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               572-720
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               30, 111
               

               Conread position:
               599-718
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 81
               

               Conread position:
               606-741
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 35
               
Show alignments to all cow chromosomes.