Cow genome map

Conread name: Ss1.1-Pig4-TMW8031J08.3

Conread position: 1-191
Cow position:
Alignm length: 191
Alignm identity: 154
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 0

Conread position: 1-198
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 1-239
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 1-287
Cow position:
Alignm length: 287
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-307
Cow position:
Alignm length: 308
Alignm identity: 201
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 152, 175

Conread position: 1-307
Cow position:
Alignm length: 307
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-314
Cow position:
Alignm length: 314
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-317
Cow position:
Alignm length: 322
Alignm identity: 204
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 28, 22

Conread position: 1-326
Cow position:
Alignm length: 329
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 37

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position:
Alignm length: 329
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 88

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 248

Conread position: 1-326
Cow position:
Alignm length: 327
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 39

Conread position: 1-333
Cow position:
Alignm length: 335
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 0

Conread position: 1-333
Cow position:
Alignm length: 335
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 71

Conread position: 1-334
Cow position:
Alignm length: 336
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 72

Conread position: 1-350
Cow position:
Alignm length: 355
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 26

Conread position: 1-364
Cow position:
Alignm length: 366
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 336

Conread position: 1-364
Cow position:
Alignm length: 366
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 327

Conread position: 1-364
Cow position:
Alignm length: 367
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 109

Conread position: 1-367
Cow position:
Alignm length: 382
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 268

Conread position: 1-370
Cow position:
Alignm length: 370
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 1-396
Cow position:
Alignm length: 400
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 101

Conread position: 1-413
Cow position:
Alignm length: 426
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 37

Conread position: 1-413
Cow position:
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 245

Conread position: 1-425
Cow position:
Alignm length: 433
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 100

Conread position: 1-425
Cow position:
Alignm length: 431
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 172

Conread position: 2-242
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 2-306
Cow position:
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 81

Conread position: 2-326
Cow position:
Alignm length: 326
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 0

Conread position: 3-119
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 3-325
Cow position:
Alignm length: 326
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 25

Conread position: 4-334
Cow position:
Alignm length: 337
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 14

Conread position: 4-370
Cow position:
Alignm length: 370
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 82

Conread position: 5-370
Cow position:
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 68

Conread position: 13-332
Cow position:
Alignm length: 326
Alignm identity: 216
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 93, 127

Conread position: 19-370
Cow position:
Alignm length: 355
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 83

Conread position: 28-193
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 162, 0

Conread position: 28-406
Cow position:
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 251

Conread position: 34-283
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 36-281
Cow position:
Alignm length: 249
Alignm identity: 168
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 134, 37

Conread position: 46-308
Cow position:
Alignm length: 265
Alignm identity: 179
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 224, 47

Conread position: 48-444
Cow position:
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 82

Conread position: 67-352
Cow position:
Alignm length: 287
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 182

Conread position: 69-370
Cow position:
Alignm length: 303
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 35

Conread position: 80-315
Cow position:
Alignm length: 239
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 141

Conread position: 82-335
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 18, 70

Conread position: 87-314
Cow position:
Alignm length: 228
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 106-411
Cow position:
Alignm length: 315
Alignm identity: 223
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 205, 40

Conread position: 190-307
Cow position:
Alignm length: 118
Alignm identity: 103
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 190-326
Cow position:
Alignm length: 138
Alignm identity: 115
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 121, 0

Conread position: 224-326
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 569-722
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 0

Show alignments to all cow chromosomes.