Cow genome map

Conread name: Ss1.1-Pig4-TMW8031J08.3

Conread position: 1-184
Cow position: chr26:11301780-11301958 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 1-186
Cow position: chr26:5551763-5551946 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 98, 79

Conread position: 1-257
Cow position: chr26:25033950-25034203 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 62

Conread position: 1-288
Cow position: chr26:17997010-17996725 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 80

Conread position: 1-324
Cow position: chr26:3030841-3030517 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-325
Cow position: chr26:12574408-12574096 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 53

Conread position: 1-326
Cow position: chr26:2198616-2198940 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 75

Conread position: 1-326
Cow position: chr26:5675147-5675473 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position: chr26:8869865-8870196 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 1-326
Cow position: chr26:8918839-8919164 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 72

Conread position: 1-326
Cow position: chr26:9563369-9563044 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 162

Conread position: 1-326
Cow position: chr26:11254068-11253742 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 0

Conread position: 1-326
Cow position: chr26:12588576-12588251 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 271

Conread position: 1-332
Cow position: chr26:1602213-1601872 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 13

Conread position: 1-333
Cow position: chr26:15144772-15144438 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 101

Conread position: 1-333
Cow position: chr26:30782731-30783065 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 173

Conread position: 1-337
Cow position: chr26:18855077-18855413 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 207

Conread position: 1-349
Cow position: chr26:30589387-30589036 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 12

Conread position: 1-355
Cow position: chr26:3691795-3692129 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 2-307
Cow position: chr26:9118312-9118610 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 26

Conread position: 2-364
Cow position: chr26:19351525-19351165 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 326

Conread position: 3-326
Cow position: chr26:2352368-2352046 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 161

Conread position: 3-396
Cow position: chr26:20262851-20263219 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 279
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 34, 22

Conread position: 4-327
Cow position: chr26:12656285-12656587 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 49

Conread position: 4-337
Cow position: chr26:18852211-18852544 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 204

Conread position: 4-370
Cow position: chr26:4605192-4604834 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 177

Conread position: 5-130
Cow position: chr26:11536841-11536719 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 8-326
Cow position: chr26:17396936-17396617 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 0

Conread position: 19-242
Cow position: chr26:16904788-16905001 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 171, 78

Conread position: 21-275
Cow position: chr26:6488312-6488062 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 41

Conread position: 26-326
Cow position: chr26:6849422-6849123 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 18

Conread position: 28-299
Cow position: chr26:23603751-23603481 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 28-326
Cow position: chr26:9112753-9113052 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 0

Conread position: 28-413
Cow position: chr26:12666123-12666508 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 25

Conread position: 34-399
Cow position: chr26:8283041-8282670 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 142

Conread position: 34-406
Cow position: chr26:11285910-11286284 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 246
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 293, 100

Conread position: 34-507
Cow position: chr26:9845555-9845090 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 420, 42

Conread position: 42-266
Cow position: chr26:4334174-4334398 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 43-206
Cow position: chr26:20255081-20255247 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 77, 89

Conread position: 47-326
Cow position: chr26:4806507-4806247 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 131

Conread position: 48-414
Cow position: chr26:9849890-9849518 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 165

Conread position: 48-414
Cow position: chr26:9853400-9853029 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 74

Conread position: 89-313
Cow position: chr26:23043214-23043439 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 196, 191

Conread position: 195-334
Cow position: chr26:20255382-20255516 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 114, 78

Conread position: 599-744
Cow position: chr26:12656643-12656794 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 123, 78

Show alignments to all cow chromosomes.