Cow genome map
Conread name: | Ss1.1-Pig4-TMW8031J08.3 |
Conread position: | 1-184 |
Cow position: | chr26:11301780-11301958 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 132 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 1-186 |
Cow position: | chr26:5551763-5551946 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 141 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 98, 79 |
Conread position: | 1-257 |
Cow position: | chr26:25033950-25034203 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 170 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 43, 62 |
Conread position: | 1-288 |
Cow position: | chr26:17997010-17996725 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 205 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 62, 80 |
Conread position: | 1-324 |
Cow position: | chr26:3030841-3030517 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 0 |
Conread position: | 1-325 |
Cow position: | chr26:12574408-12574096 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 53 |
Conread position: | 1-326 |
Cow position: | chr26:2198616-2198940 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 75 |
Conread position: | 1-326 |
Cow position: | chr26:5675147-5675473 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 0 |
Conread position: | 1-326 |
Cow position: | chr26:8869865-8870196 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 0 |
Conread position: | 1-326 |
Cow position: | chr26:8918839-8919164 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 72 |
Conread position: | 1-326 |
Cow position: | chr26:9563369-9563044 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 162 |
Conread position: | 1-326 |
Cow position: | chr26:11254068-11253742 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 0 |
Conread position: | 1-326 |
Cow position: | chr26:12588576-12588251 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 271 |
Conread position: | 1-332 |
Cow position: | chr26:1602213-1601872 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 242 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 62, 13 |
Conread position: | 1-333 |
Cow position: | chr26:15144772-15144438 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 101 |
Conread position: | 1-333 |
Cow position: | chr26:30782731-30783065 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 173 |
Conread position: | 1-337 |
Cow position: | chr26:18855077-18855413 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 207 |
Conread position: | 1-349 |
Cow position: | chr26:30589387-30589036 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 12 |
Conread position: | 1-355 |
Cow position: | chr26:3691795-3692129 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 2-307 |
Cow position: | chr26:9118312-9118610 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 200 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 51, 26 |
Conread position: | 2-364 |
Cow position: | chr26:19351525-19351165 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 307, 326 |
Conread position: | 3-326 |
Cow position: | chr26:2352368-2352046 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 304, 161 |
Conread position: | 3-396 |
Cow position: | chr26:20262851-20263219 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 279 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 34, 22 |
Conread position: | 4-327 |
Cow position: | chr26:12656285-12656587 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 312, 49 |
Conread position: | 4-337 |
Cow position: | chr26:18852211-18852544 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 305, 204 |
Conread position: | 4-370 |
Cow position: | chr26:4605192-4604834 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 305, 177 |
Conread position: | 5-130 |
Cow position: | chr26:11536841-11536719 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 102 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 8-326 |
Cow position: | chr26:17396936-17396617 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 301, 0 |
Conread position: | 19-242 |
Cow position: | chr26:16904788-16905001 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 161 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 171, 78 |
Conread position: | 21-275 |
Cow position: | chr26:6488312-6488062 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 174 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 17, 41 |
Conread position: | 26-326 |
Cow position: | chr26:6849422-6849123 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 18 |
Conread position: | 28-299 |
Cow position: | chr26:23603751-23603481 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 28-326 |
Cow position: | chr26:9112753-9113052 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 281, 0 |
Conread position: | 28-413 |
Cow position: | chr26:12666123-12666508 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 25 |
Conread position: | 34-399 |
Cow position: | chr26:8283041-8282670 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 142 |
Conread position: | 34-406 |
Cow position: | chr26:11285910-11286284 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 246 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 293, 100 |
Conread position: | 34-507 |
Cow position: | chr26:9845555-9845090 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 420, 42 |
Conread position: | 42-266 |
Cow position: | chr26:4334174-4334398 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 43-206 |
Cow position: | chr26:20255081-20255247 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 132 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 77, 89 |
Conread position: | 47-326 |
Cow position: | chr26:4806507-4806247 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 262, 131 |
Conread position: | 48-414 |
Cow position: | chr26:9849890-9849518 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 261, 165 |
Conread position: | 48-414 |
Cow position: | chr26:9853400-9853029 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 261, 74 |
Conread position: | 89-313 |
Cow position: | chr26:23043214-23043439 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 156 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 196, 191 |
Conread position: | 195-334 |
Cow position: | chr26:20255382-20255516 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 114, 78 |
Conread position: | 599-744 |
Cow position: | chr26:12656643-12656794 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 123, 78 |
Show alignments to all cow chromosomes.