Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8031J08.3
        

               Conread position:
               1-162
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               190, 72
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               49, 146
               

               Conread position:
               1-307
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 0
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 0
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               225, 18
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               263, 46
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 7
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 43
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 100
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 100
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 76
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 83
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 14
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 169
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 43
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 149
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 163
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 0
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 267
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 0
               

               Conread position:
               1-333
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 51
               

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               294, 39
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 0
               

               Conread position:
               1-349
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 327
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 67
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               359, 81
               

               Conread position:
               1-391
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               1-401
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               170, 24
               

               Conread position:
               1-402
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               189, 72
               

               Conread position:
               1-413
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 39
               

               Conread position:
               1-528
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 250
               

               Conread position:
               2-291
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 263
               

               Conread position:
               2-326
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 21
               

               Conread position:
               2-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 0
               

               Conread position:
               2-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 0
               

               Conread position:
               2-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 211
               

               Conread position:
               2-335
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               2-364
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 37
               

               Conread position:
               3-239
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               216, 68
               

               Conread position:
               3-259
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-314
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-335
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               3-335
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               288, 70
               

               Conread position:
               3-364
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 205
               

               Conread position:
               3-413
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 118
               

               Conread position:
               4-239
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               4-275
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               178, 34
               

               Conread position:
               4-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 190
               

               Conread position:
               4-334
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 0
               

               Conread position:
               4-509
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 36
               

               Conread position:
               4-722
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               555
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 40
               

               Conread position:
               5-413
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 34
               

               Conread position:
               6-179
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               6-364
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 322
               

               Conread position:
               7-333
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 35
               

               Conread position:
               8-245
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               8-731
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               9-350
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 116
               

               Conread position:
               14-333
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               285, 36
               

               Conread position:
               15-333
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 185
               

               Conread position:
               16-508
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 117
               

               Conread position:
               18-307
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               67, 140
               

               Conread position:
               28-339
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               30, 95
               

               Conread position:
               34-185
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               34-371
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               34, 54
               

               Conread position:
               34-403
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 39
               

               Conread position:
               35-291
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               38-314
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 161
               

               Conread position:
               38-326
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 108
               

               Conread position:
               40-506
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 289
               

               Conread position:
               41-326
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 0
               

               Conread position:
               58-335
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 108
               

               Conread position:
               65-326
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 61
               

               Conread position:
               67-335
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               67-411
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               259, 47
               

               Conread position:
               68-335
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               39, 183
               

               Conread position:
               79-228
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-256
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               93-404
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 149
               

               Conread position:
               100-343
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 0
               

               Conread position:
               115-413
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               213, 43
               

               Conread position:
               146-326
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               149
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               151-370
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               95, 47
               

               Conread position:
               156-366
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               153, 48
               

               Conread position:
               173-307
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               178-326
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               178-326
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               192-326
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               115, 50
               

               Conread position:
               196-314
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               597-744
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               104, 64
               
Show alignments to all cow chromosomes.